Protein–RNA interactions for Protein: O00257

CBX4, E3 SUMO-protein ligase CBX4, humanhuman

Predictions only

Length 560 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4O00257 AL031601.2-202ENST00000622650 282 ntBASIC4.14□□□□□ -1.75
CBX4O00257 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC4.14□□□□□ -1.75
CBX4O00257 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.14□□□□□ -1.75
CBX4O00257 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
CBX4O00257 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC4.14□□□□□ -1.75
CBX4O00257 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC4.14□□□□□ -1.75
CBX4O00257 MTND4P23-201ENST00000447723 1363 ntBASIC4.14□□□□□ -1.75
CBX4O00257 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
CBX4O00257 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
CBX4O00257 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC4.13□□□□□ -1.75
CBX4O00257 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC4.13□□□□□ -1.75
CBX4O00257 ZNF736P3Y-201ENST00000428264 1465 ntBASIC4.13□□□□□ -1.75
CBX4O00257 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
CBX4O00257 Y_RNA.135-201ENST00000363439 95 ntBASIC4.13□□□□□ -1.75
CBX4O00257 RNU6-214P-201ENST00000384130 107 ntBASIC4.13□□□□□ -1.75
CBX4O00257 MIR493-201ENST00000385254 89 ntBASIC4.13□□□□□ -1.75
CBX4O00257 AL360182.1-201ENST00000397433 468 ntBASIC4.13□□□□□ -1.75
CBX4O00257 RNA5SP44-201ENST00000410446 133 ntBASIC4.13□□□□□ -1.75
CBX4O00257 RNU6-1025P-201ENST00000410629 104 ntBASIC4.13□□□□□ -1.75
CBX4O00257 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC4.13□□□□□ -1.75
CBX4O00257 MTND1P17-201ENST00000448961 204 ntBASIC4.13□□□□□ -1.75
CBX4O00257 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC4.13□□□□□ -1.75
CBX4O00257 AC087884.1-201ENST00000469738 328 ntBASIC4.13□□□□□ -1.75
CBX4O00257 AC017037.1-201ENST00000508460 471 ntBASIC4.13□□□□□ -1.75
CBX4O00257 MTND3P25-201ENST00000509243 135 ntBASIC4.13□□□□□ -1.75
CBX4O00257 AC006499.6-201ENST00000511169 607 ntBASIC4.13□□□□□ -1.75
CBX4O00257 RNU6-1332P-201ENST00000516666 104 ntBASIC4.13□□□□□ -1.75
CBX4O00257 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC4.13□□□□□ -1.75
CBX4O00257 AP003122.3-201ENST00000526316 255 ntBASIC4.13□□□□□ -1.75
CBX4O00257 AC084851.1-201ENST00000529105 249 ntBASIC4.13□□□□□ -1.75
CBX4O00257 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC4.13□□□□□ -1.75
CBX4O00257 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
CBX4O00257 AL139395.1-201ENST00000603662 160 ntBASIC4.13□□□□□ -1.75
CBX4O00257 AC064836.2-201ENST00000609491 462 ntBASIC4.13□□□□□ -1.75
CBX4O00257 AL133215.3-201ENST00000609801 448 ntBASIC4.13□□□□□ -1.75
CBX4O00257 ZNF519P1-201ENST00000449011 1626 ntBASIC4.13□□□□□ -1.75
CBX4O00257 AC007785.2-201ENST00000598627 1916 ntBASIC4.13□□□□□ -1.75
CBX4O00257 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
CBX4O00257 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC4.13□□□□□ -1.75
CBX4O00257 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
CBX4O00257 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC4.12□□□□□ -1.75
CBX4O00257 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
CBX4O00257 PNPT1P2-201ENST00000456768 2050 ntBASIC4.12□□□□□ -1.75
CBX4O00257 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
CBX4O00257 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.12□□□□□ -1.75
CBX4O00257 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.12□□□□□ -1.75
CBX4O00257 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CBX4O00257 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CBX4O00257 RNU6-1303P-201ENST00000364841 107 ntBASIC4.12□□□□□ -1.75
CBX4O00257 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
CBX4O00257 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
CBX4O00257 DEFB109C-201ENST00000382575 264 ntBASIC4.12□□□□□ -1.75
CBX4O00257 DEFB109B-201ENST00000382656 264 ntBASIC4.12□□□□□ -1.75
CBX4O00257 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC4.12□□□□□ -1.75
CBX4O00257 AL353621.1-201ENST00000418219 243 ntBASIC4.12□□□□□ -1.75
CBX4O00257 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC4.12□□□□□ -1.75
CBX4O00257 MTCO2P12-201ENST00000427426 682 ntBASIC4.12□□□□□ -1.75
CBX4O00257 LAMTOR5P1-201ENST00000444290 270 ntBASIC4.12□□□□□ -1.75
CBX4O00257 AC104472.2-201ENST00000469035 601 ntBASIC4.12□□□□□ -1.75
CBX4O00257 AC026801.1-201ENST00000497178 464 ntBASIC4.12□□□□□ -1.75
CBX4O00257 IFITM8P-201ENST00000522529 394 ntBASIC4.12□□□□□ -1.75
CBX4O00257 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC4.12□□□□□ -1.75
CBX4O00257 AL121821.2-201ENST00000556081 394 ntBASIC4.12□□□□□ -1.75
CBX4O00257 HSPE1P5-201ENST00000561489 272 ntBASIC4.12□□□□□ -1.75
CBX4O00257 LRRC37A5P-203ENST00000580181 585 ntBASIC4.12□□□□□ -1.75
CBX4O00257 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC4.12□□□□□ -1.75
CBX4O00257 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC4.12□□□□□ -1.75
CBX4O00257 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC4.12□□□□□ -1.75
CBX4O00257 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC4.12□□□□□ -1.75
CBX4O00257 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.12□□□□□ -1.75
CBX4O00257 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC4.12□□□□□ -1.75
CBX4O00257 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC4.12□□□□□ -1.75
CBX4O00257 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4.12□□□□□ -1.75
CBX4O00257 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.12□□□□□ -1.75
CBX4O00257 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CBX4O00257 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.11□□□□□ -1.75
CBX4O00257 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC4.11□□□□□ -1.75
CBX4O00257 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC4.11□□□□□ -1.75
CBX4O00257 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC4.11□□□□□ -1.75
CBX4O00257 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC4.11□□□□□ -1.75
CBX4O00257 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
CBX4O00257 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
CBX4O00257 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC4.11□□□□□ -1.75
CBX4O00257 SNORA63-201ENST00000363450 132 ntBASIC4.11□□□□□ -1.75
CBX4O00257 AL133412.1-201ENST00000380194 2992 ntBASIC4.11□□□□□ -1.75
CBX4O00257 MIR93-201ENST00000385024 80 ntBASIC4.11□□□□□ -1.75
CBX4O00257 RNU6-1197P-201ENST00000391183 107 ntBASIC4.11□□□□□ -1.75
CBX4O00257 RNU6-607P-201ENST00000411283 108 ntBASIC4.11□□□□□ -1.75
CBX4O00257 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC4.11□□□□□ -1.75
CBX4O00257 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC4.11□□□□□ -1.75
CBX4O00257 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC4.11□□□□□ -1.75
CBX4O00257 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC4.11□□□□□ -1.75
CBX4O00257 FABP5P14-201ENST00000437273 393 ntBASIC4.11□□□□□ -1.75
CBX4O00257 Z82210.1-201ENST00000440037 231 ntBASIC4.11□□□□□ -1.75
CBX4O00257 AL359672.1-201ENST00000442302 409 ntBASIC4.11□□□□□ -1.75
CBX4O00257 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC4.11□□□□□ -1.75
CBX4O00257 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC4.11□□□□□ -1.75
CBX4O00257 RNU7-138P-201ENST00000459479 64 ntBASIC4.11□□□□□ -1.75
CBX4O00257 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC4.11□□□□□ -1.75
CBX4O00257 RN7SKP289-201ENST00000517244 295 ntBASIC4.11□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 107.5 ms