Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 AC106872.3-201ENST00000495104 446 ntBASIC2.29□□□□□ -2.04
TMX2-CTNND1H3BSU7 AC135721.1-201ENST00000497954 479 ntBASIC2.29□□□□□ -2.04
TMX2-CTNND1H3BSU7 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC2.29□□□□□ -2.04
TMX2-CTNND1H3BSU7 CBX3P3-201ENST00000508108 532 ntBASIC2.29□□□□□ -2.04
TMX2-CTNND1H3BSU7 AC026436.1-201ENST00000510537 270 ntBASIC2.29□□□□□ -2.04
TMX2-CTNND1H3BSU7 MTCO1P47-201ENST00000523889 1271 ntBASIC2.29□□□□□ -2.04
TMX2-CTNND1H3BSU7 AC068587.4-201ENST00000533893 186 ntBASIC2.29□□□□□ -2.04
TMX2-CTNND1H3BSU7 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC2.29□□□□□ -2.04
TMX2-CTNND1H3BSU7 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC2.29□□□□□ -2.04
TMX2-CTNND1H3BSU7 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC2.29□□□□□ -2.04
TMX2-CTNND1H3BSU7 AKIRIN1P1-201ENST00000547384 544 ntBASIC2.29□□□□□ -2.04
TMX2-CTNND1H3BSU7 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.29□□□□□ -2.04
TMX2-CTNND1H3BSU7 DEFB122-202ENST00000569013 197 ntBASIC2.29□□□□□ -2.04
TMX2-CTNND1H3BSU7 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC2.29□□□□□ -2.04
TMX2-CTNND1H3BSU7 AC008088.1-201ENST00000580993 280 ntBASIC2.29□□□□□ -2.04
TMX2-CTNND1H3BSU7 AP001330.4-201ENST00000604350 154 ntBASIC2.29□□□□□ -2.04
TMX2-CTNND1H3BSU7 AL022161.1-201ENST00000604390 213 ntBASIC2.29□□□□□ -2.04
TMX2-CTNND1H3BSU7 AC012443.1-201ENST00000605605 231 ntBASIC2.29□□□□□ -2.04
TMX2-CTNND1H3BSU7 AL158211.4-201ENST00000606988 584 ntBASIC2.29□□□□□ -2.04
TMX2-CTNND1H3BSU7 AL355472.4-201ENST00000610233 626 ntBASIC2.29□□□□□ -2.04
TMX2-CTNND1H3BSU7 MIR6076-201ENST00000617521 113 ntBASIC2.29□□□□□ -2.04
TMX2-CTNND1H3BSU7 MIR6130-201ENST00000619419 109 ntBASIC2.29□□□□□ -2.04
TMX2-CTNND1H3BSU7 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC2.29□□□□□ -2.04
TMX2-CTNND1H3BSU7 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC2.29□□□□□ -2.04
TMX2-CTNND1H3BSU7 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
TMX2-CTNND1H3BSU7 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.28□□□□□ -2.04
TMX2-CTNND1H3BSU7 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
TMX2-CTNND1H3BSU7 AC093536.2-201ENST00000565257 1406 ntBASIC2.28□□□□□ -2.04
TMX2-CTNND1H3BSU7 AL513185.3-201ENST00000433335 1300 ntBASIC2.28□□□□□ -2.04
TMX2-CTNND1H3BSU7 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.28□□□□□ -2.04
TMX2-CTNND1H3BSU7 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
TMX2-CTNND1H3BSU7 Y_RNA.560-201ENST00000384689 102 ntBASIC2.28□□□□□ -2.04
TMX2-CTNND1H3BSU7 RNU2-43P-201ENST00000410306 190 ntBASIC2.28□□□□□ -2.04
TMX2-CTNND1H3BSU7 RN7SKP140-201ENST00000411196 284 ntBASIC2.28□□□□□ -2.04
TMX2-CTNND1H3BSU7 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC2.28□□□□□ -2.04
TMX2-CTNND1H3BSU7 AC009518.2-201ENST00000418056 731 ntBASIC2.28□□□□□ -2.04
TMX2-CTNND1H3BSU7 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC2.28□□□□□ -2.04
TMX2-CTNND1H3BSU7 MTCYBP39-201ENST00000437562 491 ntBASIC2.28□□□□□ -2.04
TMX2-CTNND1H3BSU7 AC004866.2-201ENST00000438285 481 ntBASIC2.28□□□□□ -2.04
TMX2-CTNND1H3BSU7 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC2.28□□□□□ -2.04
TMX2-CTNND1H3BSU7 AC096638.1-201ENST00000444678 216 ntBASIC2.28□□□□□ -2.04
TMX2-CTNND1H3BSU7 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC2.28□□□□□ -2.04
TMX2-CTNND1H3BSU7 PAXBP1P1-201ENST00000449315 447 ntBASIC2.28□□□□□ -2.04
TMX2-CTNND1H3BSU7 AC011753.1-201ENST00000451001 220 ntBASIC2.28□□□□□ -2.04
TMX2-CTNND1H3BSU7 KATNBL1P6-201ENST00000453433 915 ntBASIC2.28□□□□□ -2.04
TMX2-CTNND1H3BSU7 BET1P1-201ENST00000482276 359 ntBASIC2.28□□□□□ -2.04
TMX2-CTNND1H3BSU7 FAM172BP-201ENST00000487497 1089 ntBASIC2.28□□□□□ -2.04
TMX2-CTNND1H3BSU7 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
TMX2-CTNND1H3BSU7 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC2.28□□□□□ -2.04
TMX2-CTNND1H3BSU7 AC022483.1-201ENST00000514020 567 ntBASIC2.28□□□□□ -2.04
TMX2-CTNND1H3BSU7 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC2.28□□□□□ -2.04
TMX2-CTNND1H3BSU7 RNU6-1003P-201ENST00000517099 105 ntBASIC2.28□□□□□ -2.04
TMX2-CTNND1H3BSU7 HSPE1P18-201ENST00000517602 280 ntBASIC2.28□□□□□ -2.04
TMX2-CTNND1H3BSU7 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC2.28□□□□□ -2.04
TMX2-CTNND1H3BSU7 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC2.28□□□□□ -2.04
TMX2-CTNND1H3BSU7 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC2.28□□□□□ -2.04
TMX2-CTNND1H3BSU7 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC2.28□□□□□ -2.04
TMX2-CTNND1H3BSU7 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC2.28□□□□□ -2.04
TMX2-CTNND1H3BSU7 AC121758.2-201ENST00000553271 193 ntBASIC2.28□□□□□ -2.04
TMX2-CTNND1H3BSU7 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC2.28□□□□□ -2.04
TMX2-CTNND1H3BSU7 AC012414.6-201ENST00000568241 401 ntBASIC2.28□□□□□ -2.04
TMX2-CTNND1H3BSU7 AP005136.1-201ENST00000579765 429 ntBASIC2.28□□□□□ -2.04
TMX2-CTNND1H3BSU7 BNIP3P23-201ENST00000599655 511 ntBASIC2.28□□□□□ -2.04
TMX2-CTNND1H3BSU7 AC098826.3-201ENST00000603823 466 ntBASIC2.28□□□□□ -2.04
TMX2-CTNND1H3BSU7 AC112187.2-201ENST00000604345 283 ntBASIC2.28□□□□□ -2.04
TMX2-CTNND1H3BSU7 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC2.28□□□□□ -2.04
TMX2-CTNND1H3BSU7 CRYM-AS1-204ENST00000637983 556 ntBASIC2.28□□□□□ -2.04
TMX2-CTNND1H3BSU7 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
TMX2-CTNND1H3BSU7 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC2.27□□□□□ -2.05
TMX2-CTNND1H3BSU7 AL138713.1-201ENST00000624026 2130 ntBASIC2.27□□□□□ -2.05
TMX2-CTNND1H3BSU7 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.27□□□□□ -2.05
TMX2-CTNND1H3BSU7 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
TMX2-CTNND1H3BSU7 Y_RNA.46-201ENST00000362695 102 ntBASIC2.27□□□□□ -2.05
TMX2-CTNND1H3BSU7 RNU5F-6P-201ENST00000362979 116 ntBASIC2.27□□□□□ -2.05
TMX2-CTNND1H3BSU7 RNU6-76P-201ENST00000384060 104 ntBASIC2.27□□□□□ -2.05
TMX2-CTNND1H3BSU7 RNU6-754P-201ENST00000391166 107 ntBASIC2.27□□□□□ -2.05
TMX2-CTNND1H3BSU7 AL356057.2-201ENST00000403318 432 ntBASIC2.27□□□□□ -2.05
TMX2-CTNND1H3BSU7 CCNG1P1-201ENST00000406783 885 ntBASIC2.27□□□□□ -2.05
TMX2-CTNND1H3BSU7 BTF3P7-201ENST00000407097 488 ntBASIC2.27□□□□□ -2.05
TMX2-CTNND1H3BSU7 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC2.27□□□□□ -2.05
TMX2-CTNND1H3BSU7 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC2.27□□□□□ -2.05
TMX2-CTNND1H3BSU7 BX276092.3-201ENST00000424182 230 ntBASIC2.27□□□□□ -2.05
TMX2-CTNND1H3BSU7 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.27□□□□□ -2.05
TMX2-CTNND1H3BSU7 AC024082.2-201ENST00000434771 238 ntBASIC2.27□□□□□ -2.05
TMX2-CTNND1H3BSU7 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC2.27□□□□□ -2.05
TMX2-CTNND1H3BSU7 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC2.27□□□□□ -2.05
TMX2-CTNND1H3BSU7 MTCO1P42-201ENST00000457379 726 ntBASIC2.27□□□□□ -2.05
TMX2-CTNND1H3BSU7 RBM43P1-201ENST00000476891 1081 ntBASIC2.27□□□□□ -2.05
TMX2-CTNND1H3BSU7 MRPL42P6-201ENST00000486397 371 ntBASIC2.27□□□□□ -2.05
TMX2-CTNND1H3BSU7 AC055855.1-201ENST00000489563 579 ntBASIC2.27□□□□□ -2.05
TMX2-CTNND1H3BSU7 RPL23AP49-201ENST00000492925 468 ntBASIC2.27□□□□□ -2.05
TMX2-CTNND1H3BSU7 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC2.27□□□□□ -2.05
TMX2-CTNND1H3BSU7 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC2.27□□□□□ -2.05
TMX2-CTNND1H3BSU7 SNORA70.16-201ENST00000516390 95 ntBASIC2.27□□□□□ -2.05
TMX2-CTNND1H3BSU7 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
TMX2-CTNND1H3BSU7 IGLV3-17-201ENST00000519099 244 ntBASIC2.27□□□□□ -2.05
TMX2-CTNND1H3BSU7 AP003467.2-201ENST00000520175 319 ntBASIC2.27□□□□□ -2.05
TMX2-CTNND1H3BSU7 AC106038.2-201ENST00000520706 568 ntBASIC2.27□□□□□ -2.05
TMX2-CTNND1H3BSU7 AC060788.1-201ENST00000521318 469 ntBASIC2.27□□□□□ -2.05
TMX2-CTNND1H3BSU7 MTND2P38-201ENST00000522536 667 ntBASIC2.27□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 90.2 ms