Protein–RNA interactions for Protein: H3BMG3

SMKR1, Small lysine-rich protein 1, humanhuman

Predictions only

Length 65 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMKR1H3BMG3 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
SMKR1H3BMG3 Z75746.1-201ENST00000440243 2080 ntBASIC1.88□□□□□ -2.11
SMKR1H3BMG3 RNU1-51P-201ENST00000365345 176 ntBASIC1.88□□□□□ -2.11
SMKR1H3BMG3 U8.8-201ENST00000365399 135 ntBASIC1.88□□□□□ -2.11
SMKR1H3BMG3 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC1.88□□□□□ -2.11
SMKR1H3BMG3 RNU6-851P-201ENST00000384565 107 ntBASIC1.88□□□□□ -2.11
SMKR1H3BMG3 U8.14-201ENST00000390843 143 ntBASIC1.88□□□□□ -2.11
SMKR1H3BMG3 RSL24D1P4-201ENST00000400938 484 ntBASIC1.88□□□□□ -2.11
SMKR1H3BMG3 AL162578.1-201ENST00000406202 378 ntBASIC1.88□□□□□ -2.11
SMKR1H3BMG3 ERMN-204ENST00000409925 556 ntTSL 4 BASIC1.88□□□□□ -2.11
SMKR1H3BMG3 RNU2-36P-201ENST00000410361 191 ntBASIC1.88□□□□□ -2.11
SMKR1H3BMG3 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC1.88□□□□□ -2.11
SMKR1H3BMG3 AL008987.1-201ENST00000415528 237 ntBASIC1.88□□□□□ -2.11
SMKR1H3BMG3 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC1.88□□□□□ -2.11
SMKR1H3BMG3 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC1.88□□□□□ -2.11
SMKR1H3BMG3 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC1.88□□□□□ -2.11
SMKR1H3BMG3 UBE2D3P1-201ENST00000436669 444 ntBASIC1.88□□□□□ -2.11
SMKR1H3BMG3 HMGB3P12-201ENST00000438745 556 ntBASIC1.88□□□□□ -2.11
SMKR1H3BMG3 AC016691.1-201ENST00000441321 413 ntBASIC1.88□□□□□ -2.11
SMKR1H3BMG3 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC1.88□□□□□ -2.11
SMKR1H3BMG3 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
SMKR1H3BMG3 RPL36AP48-201ENST00000485521 314 ntBASIC1.88□□□□□ -2.11
SMKR1H3BMG3 AC068781.1-201ENST00000488231 618 ntBASIC1.88□□□□□ -2.11
SMKR1H3BMG3 LAMTOR3P2-201ENST00000504479 232 ntBASIC1.88□□□□□ -2.11
SMKR1H3BMG3 AKIRIN2P1-201ENST00000505898 352 ntBASIC1.88□□□□□ -2.11
SMKR1H3BMG3 ACA59.2-201ENST00000517061 156 ntBASIC1.88□□□□□ -2.11
SMKR1H3BMG3 PSMA2P1-201ENST00000526365 646 ntBASIC1.88□□□□□ -2.11
SMKR1H3BMG3 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC1.88□□□□□ -2.11
SMKR1H3BMG3 AC007954.1-201ENST00000554198 494 ntBASIC1.88□□□□□ -2.11
SMKR1H3BMG3 AC090888.2-201ENST00000559765 1144 ntBASIC1.88□□□□□ -2.11
SMKR1H3BMG3 MYL12BP1-201ENST00000569826 507 ntBASIC1.88□□□□□ -2.11
SMKR1H3BMG3 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC1.88□□□□□ -2.11
SMKR1H3BMG3 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC1.88□□□□□ -2.11
SMKR1H3BMG3 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC1.88□□□□□ -2.11
SMKR1H3BMG3 AC006539.2-201ENST00000601729 572 ntBASIC1.88□□□□□ -2.11
SMKR1H3BMG3 AP000860.1-201ENST00000605250 559 ntBASIC1.88□□□□□ -2.11
SMKR1H3BMG3 AC144521.1-201ENST00000607148 956 ntBASIC1.88□□□□□ -2.11
SMKR1H3BMG3 AC108747.1-201ENST00000609508 535 ntBASIC1.88□□□□□ -2.11
SMKR1H3BMG3 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC1.88□□□□□ -2.11
SMKR1H3BMG3 ATP5A1P2-202ENST00000616464 443 ntBASIC1.88□□□□□ -2.11
SMKR1H3BMG3 AL031667.3-201ENST00000620124 655 ntBASIC1.88□□□□□ -2.11
SMKR1H3BMG3 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
SMKR1H3BMG3 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC1.88□□□□□ -2.11
SMKR1H3BMG3 AL078595.3-201ENST00000623815 1166 ntBASIC1.88□□□□□ -2.11
SMKR1H3BMG3 OR4G3P-201ENST00000633500 913 ntBASIC1.88□□□□□ -2.11
SMKR1H3BMG3 AL512643.1-201ENST00000635735 524 ntBASIC1.88□□□□□ -2.11
SMKR1H3BMG3 U6.105-201ENST00000637379 88 ntBASIC1.88□□□□□ -2.11
SMKR1H3BMG3 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC1.88□□□□□ -2.11
SMKR1H3BMG3 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC1.88□□□□□ -2.11
SMKR1H3BMG3 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
SMKR1H3BMG3 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
SMKR1H3BMG3 AL391994.1-201ENST00000254724 282 ntBASIC1.87□□□□□ -2.11
SMKR1H3BMG3 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
SMKR1H3BMG3 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
SMKR1H3BMG3 RNU6-511P-201ENST00000363496 107 ntBASIC1.87□□□□□ -2.11
SMKR1H3BMG3 RNU5E-6P-201ENST00000365574 115 ntBASIC1.87□□□□□ -2.11
SMKR1H3BMG3 SMIM11P1-201ENST00000369586 178 ntBASIC1.87□□□□□ -2.11
SMKR1H3BMG3 RNU6-1200P-201ENST00000384162 107 ntBASIC1.87□□□□□ -2.11
SMKR1H3BMG3 Y_RNA.534-201ENST00000384599 112 ntBASIC1.87□□□□□ -2.11
SMKR1H3BMG3 SNORA48.5-201ENST00000391143 135 ntBASIC1.87□□□□□ -2.11
SMKR1H3BMG3 ATP5F1P3-201ENST00000397213 657 ntBASIC1.87□□□□□ -2.11
SMKR1H3BMG3 RNU6-584P-201ENST00000410350 95 ntBASIC1.87□□□□□ -2.11
SMKR1H3BMG3 RPS24P7-201ENST00000416921 246 ntBASIC1.87□□□□□ -2.11
SMKR1H3BMG3 NPM1P11-201ENST00000417106 855 ntBASIC1.87□□□□□ -2.11
SMKR1H3BMG3 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC1.87□□□□□ -2.11
SMKR1H3BMG3 AC006366.1-201ENST00000422002 759 ntBASIC1.87□□□□□ -2.11
SMKR1H3BMG3 AL158156.1-201ENST00000422509 473 ntBASIC1.87□□□□□ -2.11
SMKR1H3BMG3 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC1.87□□□□□ -2.11
SMKR1H3BMG3 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC1.87□□□□□ -2.11
SMKR1H3BMG3 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC1.87□□□□□ -2.11
SMKR1H3BMG3 AC093106.2-201ENST00000428212 385 ntBASIC1.87□□□□□ -2.11
SMKR1H3BMG3 AL591704.1-201ENST00000432574 275 ntBASIC1.87□□□□□ -2.11
SMKR1H3BMG3 RPL37P21-201ENST00000435890 276 ntBASIC1.87□□□□□ -2.11
SMKR1H3BMG3 RPS12P2-201ENST00000439728 269 ntBASIC1.87□□□□□ -2.11
SMKR1H3BMG3 RPS15AP9-201ENST00000439856 381 ntBASIC1.87□□□□□ -2.11
SMKR1H3BMG3 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC1.87□□□□□ -2.11
SMKR1H3BMG3 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC1.87□□□□□ -2.11
SMKR1H3BMG3 ZNF736P5Y-201ENST00000451173 805 ntBASIC1.87□□□□□ -2.11
SMKR1H3BMG3 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC1.87□□□□□ -2.11
SMKR1H3BMG3 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC1.87□□□□□ -2.11
SMKR1H3BMG3 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC1.87□□□□□ -2.11
SMKR1H3BMG3 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC1.87□□□□□ -2.11
SMKR1H3BMG3 AC073901.1-201ENST00000462471 408 ntBASIC1.87□□□□□ -2.11
SMKR1H3BMG3 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC1.87□□□□□ -2.11
SMKR1H3BMG3 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC1.87□□□□□ -2.11
SMKR1H3BMG3 AC018437.1-201ENST00000492214 406 ntBASIC1.87□□□□□ -2.11
SMKR1H3BMG3 AC023194.1-201ENST00000493084 308 ntBASIC1.87□□□□□ -2.11
SMKR1H3BMG3 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC1.87□□□□□ -2.11
SMKR1H3BMG3 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC1.87□□□□□ -2.11
SMKR1H3BMG3 AC083906.5-201ENST00000503722 328 ntBASIC1.87□□□□□ -2.11
SMKR1H3BMG3 AC034244.1-201ENST00000507687 207 ntBASIC1.87□□□□□ -2.11
SMKR1H3BMG3 AC117522.3-201ENST00000507974 584 ntBASIC1.87□□□□□ -2.11
SMKR1H3BMG3 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC1.87□□□□□ -2.11
SMKR1H3BMG3 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC1.87□□□□□ -2.11
SMKR1H3BMG3 SMURF2P1-201ENST00000514992 481 ntBASIC1.87□□□□□ -2.11
SMKR1H3BMG3 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC1.87□□□□□ -2.11
SMKR1H3BMG3 CBX3P7-201ENST00000532876 502 ntBASIC1.87□□□□□ -2.11
SMKR1H3BMG3 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC1.87□□□□□ -2.11
SMKR1H3BMG3 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC1.87□□□□□ -2.11
SMKR1H3BMG3 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC1.87□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 121.2 ms