Protein–RNA interactions for Protein: B2RPK0

HMGB1P1, Putative high mobility group protein B1-like 1, humanhuman

Predicted RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P1B2RPK0 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC3.14□□□□□ -1.91
HMGB1P1B2RPK0 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC3.14□□□□□ -1.91
HMGB1P1B2RPK0 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC3.14□□□□□ -1.91
HMGB1P1B2RPK0 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC3.14□□□□□ -1.91
HMGB1P1B2RPK0 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC3.14□□□□□ -1.91
HMGB1P1B2RPK0 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC3.14□□□□□ -1.91
HMGB1P1B2RPK0 RN7SL703P-201ENST00000578485 302 ntBASIC3.14□□□□□ -1.91
HMGB1P1B2RPK0 MIR2682-201ENST00000580305 110 ntBASIC3.14□□□□□ -1.91
HMGB1P1B2RPK0 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC3.14□□□□□ -1.91
HMGB1P1B2RPK0 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC3.14□□□□□ -1.91
HMGB1P1B2RPK0 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC3.14□□□□□ -1.91
HMGB1P1B2RPK0 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC3.14□□□□□ -1.91
HMGB1P1B2RPK0 AC092140.2-201ENST00000618027 521 ntBASIC3.14□□□□□ -1.91
HMGB1P1B2RPK0 Z99129.2-201ENST00000619967 314 ntBASIC3.14□□□□□ -1.91
HMGB1P1B2RPK0 ATM-228ENST00000639240 498 ntTSL 5 BASIC3.14□□□□□ -1.91
HMGB1P1B2RPK0 ATM-230ENST00000640388 578 ntTSL 5 BASIC3.14□□□□□ -1.91
HMGB1P1B2RPK0 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC3.14□□□□□ -1.91
HMGB1P1B2RPK0 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.14□□□□□ -1.91
HMGB1P1B2RPK0 RNU4-35P-201ENST00000362588 141 ntBASIC3.13□□□□□ -1.91
HMGB1P1B2RPK0 SNORA58B-201ENST00000364259 136 ntBASIC3.13□□□□□ -1.91
HMGB1P1B2RPK0 RNU6-395P-201ENST00000365662 106 ntBASIC3.13□□□□□ -1.91
HMGB1P1B2RPK0 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
HMGB1P1B2RPK0 CISD1P1-201ENST00000393907 327 ntBASIC3.13□□□□□ -1.91
HMGB1P1B2RPK0 AL357075.1-201ENST00000404107 726 ntBASIC3.13□□□□□ -1.91
HMGB1P1B2RPK0 MIR1302-8-201ENST00000408342 128 ntBASIC3.13□□□□□ -1.91
HMGB1P1B2RPK0 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC3.13□□□□□ -1.91
HMGB1P1B2RPK0 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC3.13□□□□□ -1.91
HMGB1P1B2RPK0 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC3.13□□□□□ -1.91
HMGB1P1B2RPK0 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC3.13□□□□□ -1.91
HMGB1P1B2RPK0 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC3.13□□□□□ -1.91
HMGB1P1B2RPK0 RPS29P6-201ENST00000438196 145 ntBASIC3.13□□□□□ -1.91
HMGB1P1B2RPK0 VN1R34P-201ENST00000447387 883 ntBASIC3.13□□□□□ -1.91
HMGB1P1B2RPK0 KATNBL1P6-201ENST00000453433 915 ntBASIC3.13□□□□□ -1.91
HMGB1P1B2RPK0 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC3.13□□□□□ -1.91
HMGB1P1B2RPK0 AF213884.2-201ENST00000510417 903 ntBASIC3.13□□□□□ -1.91
HMGB1P1B2RPK0 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC3.13□□□□□ -1.91
HMGB1P1B2RPK0 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC3.13□□□□□ -1.91
HMGB1P1B2RPK0 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC3.13□□□□□ -1.91
HMGB1P1B2RPK0 RNU6-1129P-201ENST00000515964 104 ntBASIC3.13□□□□□ -1.91
HMGB1P1B2RPK0 RNU6-123P-201ENST00000516163 102 ntBASIC3.13□□□□□ -1.91
HMGB1P1B2RPK0 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC3.13□□□□□ -1.91
HMGB1P1B2RPK0 MIR5685-201ENST00000579080 79 ntBASIC3.13□□□□□ -1.91
HMGB1P1B2RPK0 MIR4286-201ENST00000580651 93 ntBASIC3.13□□□□□ -1.91
HMGB1P1B2RPK0 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC3.13□□□□□ -1.91
HMGB1P1B2RPK0 AC174048.1-201ENST00000603389 144 ntBASIC3.13□□□□□ -1.91
HMGB1P1B2RPK0 AL670379.10-201ENST00000604330 253 ntBASIC3.13□□□□□ -1.91
HMGB1P1B2RPK0 AC112191.3-201ENST00000604371 277 ntBASIC3.13□□□□□ -1.91
HMGB1P1B2RPK0 AC093424.1-201ENST00000604999 338 ntBASIC3.13□□□□□ -1.91
HMGB1P1B2RPK0 AL670379.9-201ENST00000605428 253 ntBASIC3.13□□□□□ -1.91
HMGB1P1B2RPK0 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC3.13□□□□□ -1.91
HMGB1P1B2RPK0 AC245884.12-201ENST00000615364 59 ntBASIC3.13□□□□□ -1.91
HMGB1P1B2RPK0 AC009233.1-201ENST00000616477 371 ntBASIC3.13□□□□□ -1.91
HMGB1P1B2RPK0 AC010378.1-201ENST00000619270 362 ntBASIC3.13□□□□□ -1.91
HMGB1P1B2RPK0 AC024581.2-201ENST00000619986 252 ntBASIC3.13□□□□□ -1.91
HMGB1P1B2RPK0 AC009878.1-201ENST00000621819 340 ntBASIC3.13□□□□□ -1.91
HMGB1P1B2RPK0 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC3.13□□□□□ -1.91
HMGB1P1B2RPK0 ZNF271P-202ENST00000465539 1970 ntBASIC3.12□□□□□ -1.91
HMGB1P1B2RPK0 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
HMGB1P1B2RPK0 AL139276.1-201ENST00000311910 1001 ntBASIC3.12□□□□□ -1.91
HMGB1P1B2RPK0 AC073343.1-201ENST00000328239 651 ntBASIC3.12□□□□□ -1.91
HMGB1P1B2RPK0 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
HMGB1P1B2RPK0 CIR1P3-201ENST00000405137 479 ntBASIC3.12□□□□□ -1.91
HMGB1P1B2RPK0 RNU6ATAC16P-201ENST00000408591 138 ntBASIC3.12□□□□□ -1.91
HMGB1P1B2RPK0 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC3.12□□□□□ -1.91
HMGB1P1B2RPK0 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC3.12□□□□□ -1.91
HMGB1P1B2RPK0 MYL8P-204ENST00000431574 518 ntBASIC3.12□□□□□ -1.91
HMGB1P1B2RPK0 AL353706.1-201ENST00000436728 494 ntBASIC3.12□□□□□ -1.91
HMGB1P1B2RPK0 RN7SL132P-201ENST00000478131 296 ntBASIC3.12□□□□□ -1.91
HMGB1P1B2RPK0 MRPL42P6-201ENST00000486397 371 ntBASIC3.12□□□□□ -1.91
HMGB1P1B2RPK0 RPL21P13-201ENST00000488305 481 ntBASIC3.12□□□□□ -1.91
HMGB1P1B2RPK0 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC3.12□□□□□ -1.91
HMGB1P1B2RPK0 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC3.12□□□□□ -1.91
HMGB1P1B2RPK0 AC108078.2-201ENST00000510750 236 ntBASIC3.12□□□□□ -1.91
HMGB1P1B2RPK0 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC3.12□□□□□ -1.91
HMGB1P1B2RPK0 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC3.12□□□□□ -1.91
HMGB1P1B2RPK0 RN7SKP287-201ENST00000516546 266 ntBASIC3.12□□□□□ -1.91
HMGB1P1B2RPK0 RNU6-759P-201ENST00000516740 103 ntBASIC3.12□□□□□ -1.91
HMGB1P1B2RPK0 AC092325.1-201ENST00000566449 554 ntBASIC3.12□□□□□ -1.91
HMGB1P1B2RPK0 RPS3AP23-202ENST00000574601 686 ntBASIC3.12□□□□□ -1.91
HMGB1P1B2RPK0 AC073657.2-201ENST00000605661 303 ntBASIC3.12□□□□□ -1.91
HMGB1P1B2RPK0 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC3.12□□□□□ -1.91
HMGB1P1B2RPK0 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC3.12□□□□□ -1.91
HMGB1P1B2RPK0 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
HMGB1P1B2RPK0 RNU6-641P-201ENST00000384006 107 ntBASIC3.11□□□□□ -1.91
HMGB1P1B2RPK0 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
HMGB1P1B2RPK0 RN7SKP158-201ENST00000410453 326 ntBASIC3.11□□□□□ -1.91
HMGB1P1B2RPK0 RPS3AP25-201ENST00000411660 793 ntBASIC3.11□□□□□ -1.91
HMGB1P1B2RPK0 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC3.11□□□□□ -1.91
HMGB1P1B2RPK0 TEX41-202ENST00000414256 604 ntTSL 5 BASIC3.11□□□□□ -1.91
HMGB1P1B2RPK0 NPM1P11-201ENST00000417106 855 ntBASIC3.11□□□□□ -1.91
HMGB1P1B2RPK0 AC137499.1-201ENST00000427602 88 ntBASIC3.11□□□□□ -1.91
HMGB1P1B2RPK0 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
HMGB1P1B2RPK0 AC006499.5-201ENST00000505037 514 ntBASIC3.11□□□□□ -1.91
HMGB1P1B2RPK0 MRPS33P3-201ENST00000513456 322 ntBASIC3.11□□□□□ -1.91
HMGB1P1B2RPK0 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC3.11□□□□□ -1.91
HMGB1P1B2RPK0 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
HMGB1P1B2RPK0 AC090616.2-202ENST00000584248 222 ntBASIC3.11□□□□□ -1.91
HMGB1P1B2RPK0 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC3.11□□□□□ -1.91
HMGB1P1B2RPK0 AL022161.1-201ENST00000604390 213 ntBASIC3.11□□□□□ -1.91
HMGB1P1B2RPK0 AL162713.1-201ENST00000604480 262 ntBASIC3.11□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 112.9 ms