Protein–RNA interactions for Protein: A6NDI0

TRIM49B, Putative tripartite motif-containing protein 49B, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49BA6NDI0 AL035413.2-201ENST00000604801 525 ntBASIC2.85□□□□□ -1.95
TRIM49BA6NDI0 AC019159.1-201ENST00000605094 187 ntBASIC2.85□□□□□ -1.95
TRIM49BA6NDI0 AC068276.1-201ENST00000605793 379 ntBASIC2.85□□□□□ -1.95
TRIM49BA6NDI0 AC006566.1-201ENST00000608943 513 ntBASIC2.85□□□□□ -1.95
TRIM49BA6NDI0 AC005332.10-201ENST00000612725 619 ntBASIC2.85□□□□□ -1.95
TRIM49BA6NDI0 AC013476.2-201ENST00000614456 459 ntBASIC2.85□□□□□ -1.95
TRIM49BA6NDI0 AC009268.2-201ENST00000621925 457 ntBASIC2.85□□□□□ -1.95
TRIM49BA6NDI0 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC2.85□□□□□ -1.95
TRIM49BA6NDI0 DLD-214ENST00000639772 421 ntTSL 5 BASIC2.85□□□□□ -1.95
TRIM49BA6NDI0 MTND4P4-201ENST00000439033 1366 ntBASIC2.85□□□□□ -1.95
TRIM49BA6NDI0 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.84□□□□□ -1.95
TRIM49BA6NDI0 TEX21P-201ENST00000447107 1476 ntBASIC2.84□□□□□ -1.95
TRIM49BA6NDI0 DDX10P1-201ENST00000448545 1933 ntBASIC2.84□□□□□ -1.95
TRIM49BA6NDI0 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC2.84□□□□□ -1.95
TRIM49BA6NDI0 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.84□□□□□ -1.95
TRIM49BA6NDI0 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.84□□□□□ -1.95
TRIM49BA6NDI0 AC092125.1-201ENST00000562568 1995 ntBASIC2.84□□□□□ -1.95
TRIM49BA6NDI0 Y_RNA.46-201ENST00000362695 102 ntBASIC2.84□□□□□ -1.95
TRIM49BA6NDI0 RNU6-7-201ENST00000364784 107 ntBASIC2.84□□□□□ -1.95
TRIM49BA6NDI0 RNU6-8-201ENST00000365467 107 ntBASIC2.84□□□□□ -1.95
TRIM49BA6NDI0 RNU6-741P-201ENST00000383889 107 ntBASIC2.84□□□□□ -1.95
TRIM49BA6NDI0 RNU6-1119P-201ENST00000384349 108 ntBASIC2.84□□□□□ -1.95
TRIM49BA6NDI0 Y_RNA.500-201ENST00000384466 111 ntBASIC2.84□□□□□ -1.95
TRIM49BA6NDI0 MIR9-1-201ENST00000385198 89 ntBASIC2.84□□□□□ -1.95
TRIM49BA6NDI0 AL031121.1-201ENST00000406553 254 ntBASIC2.84□□□□□ -1.95
TRIM49BA6NDI0 RNU2-52P-201ENST00000410680 190 ntBASIC2.84□□□□□ -1.95
TRIM49BA6NDI0 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC2.84□□□□□ -1.95
TRIM49BA6NDI0 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC2.84□□□□□ -1.95
TRIM49BA6NDI0 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC2.84□□□□□ -1.95
TRIM49BA6NDI0 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC2.84□□□□□ -1.95
TRIM49BA6NDI0 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC2.84□□□□□ -1.95
TRIM49BA6NDI0 PAXBP1P1-201ENST00000449315 447 ntBASIC2.84□□□□□ -1.95
TRIM49BA6NDI0 RNU7-23P-201ENST00000459465 62 ntBASIC2.84□□□□□ -1.95
TRIM49BA6NDI0 RPS20P20-201ENST00000460498 340 ntBASIC2.84□□□□□ -1.95
TRIM49BA6NDI0 AL135752.1-201ENST00000479477 471 ntBASIC2.84□□□□□ -1.95
TRIM49BA6NDI0 AC021382.1-201ENST00000483523 359 ntBASIC2.84□□□□□ -1.95
TRIM49BA6NDI0 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC2.84□□□□□ -1.95
TRIM49BA6NDI0 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC2.84□□□□□ -1.95
TRIM49BA6NDI0 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
TRIM49BA6NDI0 FABP5P5-201ENST00000515537 406 ntBASIC2.84□□□□□ -1.95
TRIM49BA6NDI0 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC2.84□□□□□ -1.95
TRIM49BA6NDI0 ZDHHC20P3-201ENST00000531576 336 ntBASIC2.84□□□□□ -1.95
TRIM49BA6NDI0 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC2.84□□□□□ -1.95
TRIM49BA6NDI0 AC007536.1-201ENST00000533382 349 ntBASIC2.84□□□□□ -1.95
TRIM49BA6NDI0 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC2.84□□□□□ -1.95
TRIM49BA6NDI0 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC2.84□□□□□ -1.95
TRIM49BA6NDI0 AC024909.2-201ENST00000553035 286 ntBASIC2.84□□□□□ -1.95
TRIM49BA6NDI0 AC138761.3-201ENST00000579993 334 ntBASIC2.84□□□□□ -1.95
TRIM49BA6NDI0 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC2.84□□□□□ -1.95
TRIM49BA6NDI0 HMGN1P30-201ENST00000589286 268 ntBASIC2.84□□□□□ -1.95
TRIM49BA6NDI0 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC2.84□□□□□ -1.95
TRIM49BA6NDI0 SEPT7P9-203ENST00000604116 343 ntBASIC2.84□□□□□ -1.95
TRIM49BA6NDI0 ATP1B3P1-201ENST00000605365 821 ntBASIC2.84□□□□□ -1.95
TRIM49BA6NDI0 AC007619.2-201ENST00000605743 379 ntBASIC2.84□□□□□ -1.95
TRIM49BA6NDI0 AC012360.2-201ENST00000609349 391 ntBASIC2.84□□□□□ -1.95
TRIM49BA6NDI0 AL355472.4-201ENST00000610233 626 ntBASIC2.84□□□□□ -1.95
TRIM49BA6NDI0 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
TRIM49BA6NDI0 AL603758.1-201ENST00000618654 241 ntBASIC2.84□□□□□ -1.95
TRIM49BA6NDI0 AC112204.3-201ENST00000623822 332 ntBASIC2.84□□□□□ -1.95
TRIM49BA6NDI0 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC2.84□□□□□ -1.95
TRIM49BA6NDI0 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.96
TRIM49BA6NDI0 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.83□□□□□ -1.96
TRIM49BA6NDI0 RNU6-270P-201ENST00000364131 105 ntBASIC2.83□□□□□ -1.96
TRIM49BA6NDI0 SNORD56.5-201ENST00000364281 72 ntBASIC2.83□□□□□ -1.96
TRIM49BA6NDI0 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC2.83□□□□□ -1.96
TRIM49BA6NDI0 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.83□□□□□ -1.96
TRIM49BA6NDI0 RNU6-248P-201ENST00000410720 107 ntBASIC2.83□□□□□ -1.96
TRIM49BA6NDI0 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC2.83□□□□□ -1.96
TRIM49BA6NDI0 CDK8P2-201ENST00000415020 547 ntBASIC2.83□□□□□ -1.96
TRIM49BA6NDI0 RPLP0P7-201ENST00000416050 667 ntBASIC2.83□□□□□ -1.96
TRIM49BA6NDI0 RPL7P10-201ENST00000417407 739 ntBASIC2.83□□□□□ -1.96
TRIM49BA6NDI0 AC109583.1-201ENST00000432156 268 ntBASIC2.83□□□□□ -1.96
TRIM49BA6NDI0 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC2.83□□□□□ -1.96
TRIM49BA6NDI0 UBBP3-201ENST00000445497 241 ntBASIC2.83□□□□□ -1.96
TRIM49BA6NDI0 CBWD4P-201ENST00000445695 655 ntBASIC2.83□□□□□ -1.96
TRIM49BA6NDI0 RPS27P26-201ENST00000494583 239 ntBASIC2.83□□□□□ -1.96
TRIM49BA6NDI0 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC2.83□□□□□ -1.96
TRIM49BA6NDI0 AC022447.3-201ENST00000506865 495 ntBASIC2.83□□□□□ -1.96
TRIM49BA6NDI0 RPL23AP94-201ENST00000512518 302 ntBASIC2.83□□□□□ -1.96
TRIM49BA6NDI0 RNU6-1220P-201ENST00000517126 108 ntBASIC2.83□□□□□ -1.96
TRIM49BA6NDI0 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC2.83□□□□□ -1.96
TRIM49BA6NDI0 AC243972.3-201ENST00000539655 198 ntBASIC2.83□□□□□ -1.96
TRIM49BA6NDI0 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC2.83□□□□□ -1.96
TRIM49BA6NDI0 AC068135.2-201ENST00000569293 1028 ntBASIC2.83□□□□□ -1.96
TRIM49BA6NDI0 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC2.83□□□□□ -1.96
TRIM49BA6NDI0 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC2.83□□□□□ -1.96
TRIM49BA6NDI0 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC2.83□□□□□ -1.96
TRIM49BA6NDI0 AC078795.2-201ENST00000602835 1252 ntBASIC2.83□□□□□ -1.96
TRIM49BA6NDI0 AL139286.2-201ENST00000606838 396 ntBASIC2.83□□□□□ -1.96
TRIM49BA6NDI0 DLEU1_2.1-201ENST00000617920 342 ntBASIC2.83□□□□□ -1.96
TRIM49BA6NDI0 AC098679.4-201ENST00000624241 654 ntBASIC2.83□□□□□ -1.96
TRIM49BA6NDI0 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
TRIM49BA6NDI0 MTND5P33-201ENST00000571250 1450 ntBASIC2.83□□□□□ -1.96
TRIM49BA6NDI0 AC026241.1-201ENST00000517873 2142 ntBASIC2.83□□□□□ -1.96
TRIM49BA6NDI0 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC2.83□□□□□ -1.96
TRIM49BA6NDI0 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC2.83□□□□□ -1.96
TRIM49BA6NDI0 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.82□□□□□ -1.96
TRIM49BA6NDI0 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.82□□□□□ -1.96
TRIM49BA6NDI0 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.82□□□□□ -1.96
TRIM49BA6NDI0 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 133.6 ms