| BACE2 | Q9Y5Z0 | UNC13C-201 | ENST00000260323 | 12946 nt | APPRIS P1 TSL 5 BASIC | 4.4 | □□□□□ -1.71 | | |
| BACE2 | Q9Y5Z0 | RXFP1-204 | ENST00000423548 | 3930 nt | TSL 2 BASIC | 4.4 | □□□□□ -1.71 | | |
| BACE2 | Q9Y5Z0 | VPS13C-201 | ENST00000249837 | 13300 nt | APPRIS P3 TSL 1 (best) BASIC | 4.4 | □□□□□ -1.71 | | |
| BACE2 | Q9Y5Z0 | CSRNP3-201 | ENST00000314499 | 11788 nt | APPRIS P1 TSL 5 BASIC | 4.4 | □□□□□ -1.71 | | |
| BACE2 | Q9Y5Z0 | DOCK7-218 | ENST00000635123 | 6297 nt | APPRIS ALT2 TSL 5 BASIC | 4.39 | □□□□□ -1.71 | | |
| BACE2 | Q9Y5Z0 | GPAM-201 | ENST00000348367 | 6371 nt | APPRIS P1 TSL 1 (best) BASIC | 4.39 | □□□□□ -1.71 | | |
| BACE2 | Q9Y5Z0 | MALRD1-204 | ENST00000454679 | 6880 nt | APPRIS P1 TSL 1 (best) BASIC | 4.39 | □□□□□ -1.71 | | |
| BACE2 | Q9Y5Z0 | NUTM2B-AS1-213 | ENST00000619625 | 7611 nt | TSL 2 BASIC | 4.39 | □□□□□ -1.71 | | |
| BACE2 | Q9Y5Z0 | RNU6-490P-201 | ENST00000362985 | 107 nt | BASIC | 4.39 | □□□□□ -1.71 | | |
| BACE2 | Q9Y5Z0 | RNU6-331P-201 | ENST00000384724 | 107 nt | BASIC | 4.39 | □□□□□ -1.71 | | |
| BACE2 | Q9Y5Z0 | MIR568-201 | ENST00000385036 | 95 nt | BASIC | 4.39 | □□□□□ -1.71 | | |
| BACE2 | Q9Y5Z0 | MIR195-201 | ENST00000385194 | 87 nt | BASIC | 4.39 | □□□□□ -1.71 | | |
| BACE2 | Q9Y5Z0 | RN7SKP202-201 | ENST00000410439 | 330 nt | BASIC | 4.39 | □□□□□ -1.71 | | |
| BACE2 | Q9Y5Z0 | AL513331.1-201 | ENST00000411908 | 397 nt | BASIC | 4.39 | □□□□□ -1.71 | | |
| BACE2 | Q9Y5Z0 | AC063979.1-201 | ENST00000415539 | 377 nt | BASIC | 4.39 | □□□□□ -1.71 | | |
| BACE2 | Q9Y5Z0 | AL451062.2-201 | ENST00000427515 | 271 nt | BASIC | 4.39 | □□□□□ -1.71 | | |
| BACE2 | Q9Y5Z0 | HMGB1P9-201 | ENST00000429856 | 646 nt | BASIC | 4.39 | □□□□□ -1.71 | | |
| BACE2 | Q9Y5Z0 | AC097713.2-201 | ENST00000430199 | 356 nt | BASIC | 4.39 | □□□□□ -1.71 | | |
| BACE2 | Q9Y5Z0 | MTCYBP9-201 | ENST00000431021 | 303 nt | BASIC | 4.39 | □□□□□ -1.71 | | |
| BACE2 | Q9Y5Z0 | NOTCH2P1-201 | ENST00000443481 | 624 nt | BASIC | 4.39 | □□□□□ -1.71 | | |
| BACE2 | Q9Y5Z0 | GSTA11P-201 | ENST00000452866 | 669 nt | BASIC | 4.39 | □□□□□ -1.71 | | |
| BACE2 | Q9Y5Z0 | MTATP8P1-201 | ENST00000467115 | 207 nt | BASIC | 4.39 | □□□□□ -1.71 | | |
| BACE2 | Q9Y5Z0 | RN7SL817P-201 | ENST00000480777 | 288 nt | BASIC | 4.39 | □□□□□ -1.71 | | |
| BACE2 | Q9Y5Z0 | AC026780.2-201 | ENST00000503489 | 730 nt | TSL 5 BASIC | 4.39 | □□□□□ -1.71 | | |
| BACE2 | Q9Y5Z0 | RNU6-699P-201 | ENST00000517081 | 110 nt | BASIC | 4.39 | □□□□□ -1.71 | | |
| BACE2 | Q9Y5Z0 | RPL21P7-201 | ENST00000557463 | 483 nt | BASIC | 4.39 | □□□□□ -1.71 | | |
| BACE2 | Q9Y5Z0 | AC092718.6-202 | ENST00000563072 | 408 nt | TSL 2 BASIC | 4.39 | □□□□□ -1.71 | | |
| BACE2 | Q9Y5Z0 | FAM60BP-201 | ENST00000578364 | 658 nt | BASIC | 4.39 | □□□□□ -1.71 | | |
| BACE2 | Q9Y5Z0 | RN7SL703P-201 | ENST00000578485 | 302 nt | BASIC | 4.39 | □□□□□ -1.71 | | |
| BACE2 | Q9Y5Z0 | MIR4503-201 | ENST00000582187 | 83 nt | BASIC | 4.39 | □□□□□ -1.71 | | |
| BACE2 | Q9Y5Z0 | ZFP30-209 | ENST00000589018 | 444 nt | TSL 5 BASIC | 4.39 | □□□□□ -1.71 | | |
| BACE2 | Q9Y5Z0 | GALP-203 | ENST00000590002 | 150 nt | TSL 1 (best) BASIC | 4.39 | □□□□□ -1.71 | | |
| BACE2 | Q9Y5Z0 | NUTF2P8-201 | ENST00000604593 | 363 nt | BASIC | 4.39 | □□□□□ -1.71 | | |
| BACE2 | Q9Y5Z0 | AL138721.1-201 | ENST00000616756 | 179 nt | BASIC | 4.39 | □□□□□ -1.71 | | |
| BACE2 | Q9Y5Z0 | AL031601.2-202 | ENST00000622650 | 282 nt | BASIC | 4.39 | □□□□□ -1.71 | | |
| BACE2 | Q9Y5Z0 | FAM71D-211 | ENST00000612183 | 1790 nt | APPRIS P1 TSL 2 BASIC | 4.39 | □□□□□ -1.71 | | |
| BACE2 | Q9Y5Z0 | PANK1-203 | ENST00000342512 | 2703 nt | APPRIS P1 TSL 1 (best) BASIC | 4.39 | □□□□□ -1.71 | | |
| BACE2 | Q9Y5Z0 | U2SURP-208 | ENST00000473835 | 7276 nt | APPRIS P1 TSL 1 (best) BASIC | 4.39 | □□□□□ -1.71 | | |
| BACE2 | Q9Y5Z0 | PIKFYVE-201 | ENST00000264380 | 9901 nt | APPRIS P1 TSL 1 (best) BASIC | 4.39 | □□□□□ -1.71 | | |
| BACE2 | Q9Y5Z0 | USP34-201 | ENST00000398571 | 11357 nt | APPRIS P1 TSL 5 BASIC | 4.38 | □□□□□ -1.71 | | |
| BACE2 | Q9Y5Z0 | TBC1D15-210 | ENST00000485960 | 2489 nt | APPRIS P1 TSL 1 (best) BASIC | 4.38 | □□□□□ -1.71 | | |
| BACE2 | Q9Y5Z0 | SYNE2-203 | ENST00000357395 | 21555 nt | TSL 5 BASIC | 4.38 | □□□□□ -1.71 | | |
| BACE2 | Q9Y5Z0 | UBE2L2-201 | ENST00000254302 | 429 nt | BASIC | 4.38 | □□□□□ -1.71 | | |
| BACE2 | Q9Y5Z0 | Y_RNA.2-201 | ENST00000362330 | 96 nt | BASIC | 4.38 | □□□□□ -1.71 | | |
| BACE2 | Q9Y5Z0 | SNORA60-201 | ENST00000362396 | 134 nt | BASIC | 4.38 | □□□□□ -1.71 | | |
| BACE2 | Q9Y5Z0 | RNU6-1059P-201 | ENST00000363752 | 98 nt | BASIC | 4.38 | □□□□□ -1.71 | | |
| BACE2 | Q9Y5Z0 | RNU6-173P-201 | ENST00000364215 | 104 nt | BASIC | 4.38 | □□□□□ -1.71 | | |
| BACE2 | Q9Y5Z0 | RNA5SP235-201 | ENST00000365411 | 114 nt | BASIC | 4.38 | □□□□□ -1.71 | | |
| BACE2 | Q9Y5Z0 | RNU6-1279P-201 | ENST00000383917 | 103 nt | BASIC | 4.38 | □□□□□ -1.71 | | |
| BACE2 | Q9Y5Z0 | RNU6-629P-201 | ENST00000384061 | 103 nt | BASIC | 4.38 | □□□□□ -1.71 | | |
| BACE2 | Q9Y5Z0 | Y_RNA.496-201 | ENST00000384444 | 101 nt | BASIC | 4.38 | □□□□□ -1.71 | | |
| BACE2 | Q9Y5Z0 | Y_RNA.527-201 | ENST00000384573 | 102 nt | BASIC | 4.38 | □□□□□ -1.71 | | |
| BACE2 | Q9Y5Z0 | ELF3-AS1-201 | ENST00000415582 | 500 nt | TSL 2 BASIC | 4.38 | □□□□□ -1.71 | | |
| BACE2 | Q9Y5Z0 | AC073311.1-201 | ENST00000420146 | 505 nt | TSL 5 BASIC | 4.38 | □□□□□ -1.71 | | |
| BACE2 | Q9Y5Z0 | AL645568.3-201 | ENST00000433683 | 316 nt | BASIC | 4.38 | □□□□□ -1.71 | | |
| BACE2 | Q9Y5Z0 | AL360169.1-201 | ENST00000435116 | 143 nt | TSL 5 BASIC | 4.38 | □□□□□ -1.71 | | |
| BACE2 | Q9Y5Z0 | AL390067.1-201 | ENST00000440009 | 420 nt | TSL 3 BASIC | 4.38 | □□□□□ -1.71 | | |
| BACE2 | Q9Y5Z0 | AC012070.1-201 | ENST00000442062 | 427 nt | TSL 3 BASIC | 4.38 | □□□□□ -1.71 | | |
| BACE2 | Q9Y5Z0 | AC006011.1-201 | ENST00000442758 | 349 nt | BASIC | 4.38 | □□□□□ -1.71 | | |
| BACE2 | Q9Y5Z0 | RNU7-187P-201 | ENST00000458985 | 68 nt | BASIC | 4.38 | □□□□□ -1.71 | | |
| BACE2 | Q9Y5Z0 | RN7SL132P-201 | ENST00000478131 | 296 nt | BASIC | 4.38 | □□□□□ -1.71 | | |
| BACE2 | Q9Y5Z0 | AC108860.1-201 | ENST00000484521 | 383 nt | BASIC | 4.38 | □□□□□ -1.71 | | |
| BACE2 | Q9Y5Z0 | RPS15AP34-201 | ENST00000487776 | 387 nt | BASIC | 4.38 | □□□□□ -1.71 | | |
| BACE2 | Q9Y5Z0 | AL049874.1-201 | ENST00000489560 | 388 nt | BASIC | 4.38 | □□□□□ -1.71 | | |
| BACE2 | Q9Y5Z0 | AC110792.1-201 | ENST00000491826 | 472 nt | BASIC | 4.38 | □□□□□ -1.71 | | |
| BACE2 | Q9Y5Z0 | AC022493.2-201 | ENST00000506122 | 481 nt | BASIC | 4.38 | □□□□□ -1.71 | | |
| BACE2 | Q9Y5Z0 | LEF1-218 | ENST00000512172 | 598 nt | TSL 2 BASIC | 4.38 | □□□□□ -1.71 | | |
| BACE2 | Q9Y5Z0 | MTCO2P24-201 | ENST00000515611 | 426 nt | BASIC | 4.38 | □□□□□ -1.71 | | |
| BACE2 | Q9Y5Z0 | RNA5SP384-201 | ENST00000516615 | 116 nt | BASIC | 4.38 | □□□□□ -1.71 | | |
| BACE2 | Q9Y5Z0 | AC087369.1-201 | ENST00000520775 | 996 nt | BASIC | 4.38 | □□□□□ -1.71 | | |
| BACE2 | Q9Y5Z0 | AC104576.1-201 | ENST00000524225 | 88 nt | BASIC | 4.38 | □□□□□ -1.71 | | |
| BACE2 | Q9Y5Z0 | AP004371.1-201 | ENST00000525240 | 214 nt | BASIC | 4.38 | □□□□□ -1.71 | | |
| BACE2 | Q9Y5Z0 | AC023442.1-201 | ENST00000531247 | 422 nt | BASIC | 4.38 | □□□□□ -1.71 | | |
| BACE2 | Q9Y5Z0 | LINC02350-201 | ENST00000544419 | 480 nt | TSL 3 BASIC | 4.38 | □□□□□ -1.71 | | |
| BACE2 | Q9Y5Z0 | AL512791.1-201 | ENST00000555853 | 300 nt | TSL 3 BASIC | 4.38 | □□□□□ -1.71 | | |
| BACE2 | Q9Y5Z0 | AC020891.1-201 | ENST00000558785 | 174 nt | TSL 3 BASIC | 4.38 | □□□□□ -1.71 | | |
| BACE2 | Q9Y5Z0 | AC084882.1-201 | ENST00000561254 | 555 nt | TSL 4 BASIC | 4.38 | □□□□□ -1.71 | | |
| BACE2 | Q9Y5Z0 | AC098617.1-215 | ENST00000594798 | 1152 nt | TSL 5 BASIC | 4.38 | □□□□□ -1.71 | | |
| BACE2 | Q9Y5Z0 | AC006006.1-201 | ENST00000603082 | 144 nt | BASIC | 4.38 | □□□□□ -1.71 | | |
| BACE2 | Q9Y5Z0 | RNU6-85P-201 | ENST00000605989 | 107 nt | BASIC | 4.38 | □□□□□ -1.71 | | |
| BACE2 | Q9Y5Z0 | AL162373.1-201 | ENST00000620433 | 407 nt | BASIC | 4.38 | □□□□□ -1.71 | | |
| BACE2 | Q9Y5Z0 | AC092442.1-201 | ENST00000636216 | 138 nt | APPRIS P1 TSL 5 BASIC | 4.38 | □□□□□ -1.71 | | |
| BACE2 | Q9Y5Z0 | Z99571.1-201 | ENST00000636677 | 394 nt | BASIC | 4.38 | □□□□□ -1.71 | | |
| BACE2 | Q9Y5Z0 | SPAG5-AS1-202 | ENST00000424210 | 1551 nt | TSL 2 BASIC | 4.38 | □□□□□ -1.71 | | |
| BACE2 | Q9Y5Z0 | ADAM29-201 | ENST00000359240 | 3325 nt | APPRIS P1 TSL 2 BASIC | 4.38 | □□□□□ -1.71 | | |
| BACE2 | Q9Y5Z0 | ZNF43-207 | ENST00000595461 | 3399 nt | APPRIS ALT2 TSL 1 (best) BASIC | 4.38 | □□□□□ -1.71 | | |
| BACE2 | Q9Y5Z0 | OR6C2-203 | ENST00000641516 | 1682 nt | APPRIS P1 BASIC | 4.38 | □□□□□ -1.71 | | |
| BACE2 | Q9Y5Z0 | ATP8B4-201 | ENST00000284509 | 5676 nt | APPRIS P1 TSL 5 BASIC | 4.38 | □□□□□ -1.71 | | |
| BACE2 | Q9Y5Z0 | SDAD1P2-201 | ENST00000441308 | 2028 nt | BASIC | 4.38 | □□□□□ -1.71 | | |
| BACE2 | Q9Y5Z0 | SLC17A1-204 | ENST00000476801 | 1704 nt | APPRIS P1 TSL 2 BASIC | 4.38 | □□□□□ -1.71 | | |
| BACE2 | Q9Y5Z0 | CEP170-215 | ENST00000481987 | 3031 nt | TSL 5 BASIC | 4.38 | □□□□□ -1.71 | | |
| BACE2 | Q9Y5Z0 | POLR2B-201 | ENST00000314595 | 3748 nt | APPRIS P1 TSL 1 (best) BASIC | 4.37 | □□□□□ -1.71 | | |
| BACE2 | Q9Y5Z0 | LINC01355-201 | ENST00000566551 | 5444 nt | BASIC | 4.37 | □□□□□ -1.71 | | |
| BACE2 | Q9Y5Z0 | MUC7-203 | ENST00000456088 | 2479 nt | APPRIS P2 TSL 4 BASIC | 4.37 | □□□□□ -1.71 | | |
| BACE2 | Q9Y5Z0 | ZNF780B-202 | ENST00000434248 | 8665 nt | APPRIS P1 TSL 5 BASIC | 4.37 | □□□□□ -1.71 | | |
| BACE2 | Q9Y5Z0 | ZNF780B-207 | ENST00000617676 | 8664 nt | APPRIS P1 TSL 5 BASIC | 4.37 | □□□□□ -1.71 | | |
| BACE2 | Q9Y5Z0 | CRISP1-202 | ENST00000335847 | 1911 nt | APPRIS P1 TSL 1 (best) BASIC | 4.37 | □□□□□ -1.71 | | |
| BACE2 | Q9Y5Z0 | E2F5-208 | ENST00000521429 | 1551 nt | TSL 5 BASIC | 4.37 | □□□□□ -1.71 | | |
| BACE2 | Q9Y5Z0 | EMSY-215 | ENST00000533248 | 3798 nt | TSL 1 (best) BASIC | 4.37 | □□□□□ -1.71 | | |
| BACE2 | Q9Y5Z0 | RNA5SP52-201 | ENST00000362448 | 134 nt | BASIC | 4.37 | □□□□□ -1.71 | | |