Protein–RNA interactions for Protein: Q9Y5H4

PCDHGA1, Protocadherin gamma-A1, humanhuman

Predictions only

Length 931 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1Q9Y5H4 AC022079.1-201ENST00000621546 602 ntBASIC2.92□□□□□ -1.94
PCDHGA1Q9Y5H4 FRG1KP-201ENST00000623592 341 ntBASIC2.92□□□□□ -1.94
PCDHGA1Q9Y5H4 AC073476.4-201ENST00000628409 72 ntBASIC2.92□□□□□ -1.94
PCDHGA1Q9Y5H4 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC2.92□□□□□ -1.94
PCDHGA1Q9Y5H4 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC2.92□□□□□ -1.94
PCDHGA1Q9Y5H4 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.91□□□□□ -1.94
PCDHGA1Q9Y5H4 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
PCDHGA1Q9Y5H4 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.91□□□□□ -1.94
PCDHGA1Q9Y5H4 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.91□□□□□ -1.94
PCDHGA1Q9Y5H4 SNORD56.3-201ENST00000363507 71 ntBASIC2.91□□□□□ -1.94
PCDHGA1Q9Y5H4 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC2.91□□□□□ -1.94
PCDHGA1Q9Y5H4 SNORD67-201ENST00000390833 111 ntBASIC2.91□□□□□ -1.94
PCDHGA1Q9Y5H4 RPS4XP8-201ENST00000402039 771 ntBASIC2.91□□□□□ -1.94
PCDHGA1Q9Y5H4 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC2.91□□□□□ -1.94
PCDHGA1Q9Y5H4 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC2.91□□□□□ -1.94
PCDHGA1Q9Y5H4 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC2.91□□□□□ -1.94
PCDHGA1Q9Y5H4 SDCBPP3-201ENST00000419629 891 ntBASIC2.91□□□□□ -1.94
PCDHGA1Q9Y5H4 AC006366.1-201ENST00000422002 759 ntBASIC2.91□□□□□ -1.94
PCDHGA1Q9Y5H4 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC2.91□□□□□ -1.94
PCDHGA1Q9Y5H4 AC019097.1-201ENST00000424783 735 ntBASIC2.91□□□□□ -1.94
PCDHGA1Q9Y5H4 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC2.91□□□□□ -1.94
PCDHGA1Q9Y5H4 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC2.91□□□□□ -1.94
PCDHGA1Q9Y5H4 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC2.91□□□□□ -1.94
PCDHGA1Q9Y5H4 RPL21P2-201ENST00000440049 481 ntBASIC2.91□□□□□ -1.94
PCDHGA1Q9Y5H4 MTATP6P30-201ENST00000443540 664 ntBASIC2.91□□□□□ -1.94
PCDHGA1Q9Y5H4 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC2.91□□□□□ -1.94
PCDHGA1Q9Y5H4 USP9YP12-201ENST00000450481 570 ntBASIC2.91□□□□□ -1.94
PCDHGA1Q9Y5H4 RPL26P9-201ENST00000457466 433 ntBASIC2.91□□□□□ -1.94
PCDHGA1Q9Y5H4 MRPS17P3-201ENST00000465453 385 ntBASIC2.91□□□□□ -1.94
PCDHGA1Q9Y5H4 AC117440.1-201ENST00000474107 571 ntBASIC2.91□□□□□ -1.94
PCDHGA1Q9Y5H4 RPL31P41-201ENST00000477967 372 ntBASIC2.91□□□□□ -1.94
PCDHGA1Q9Y5H4 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC2.91□□□□□ -1.94
PCDHGA1Q9Y5H4 AC022634.1-201ENST00000520765 532 ntBASIC2.91□□□□□ -1.94
PCDHGA1Q9Y5H4 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
PCDHGA1Q9Y5H4 AC022878.1-201ENST00000530684 149 ntBASIC2.91□□□□□ -1.94
PCDHGA1Q9Y5H4 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC2.91□□□□□ -1.94
PCDHGA1Q9Y5H4 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC2.91□□□□□ -1.94
PCDHGA1Q9Y5H4 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC2.91□□□□□ -1.94
PCDHGA1Q9Y5H4 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC2.91□□□□□ -1.94
PCDHGA1Q9Y5H4 AC008277.2-201ENST00000605196 797 ntBASIC2.91□□□□□ -1.94
PCDHGA1Q9Y5H4 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC2.91□□□□□ -1.94
PCDHGA1Q9Y5H4 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC2.91□□□□□ -1.94
PCDHGA1Q9Y5H4 uc_338.12-201ENST00000616344 181 ntBASIC2.91□□□□□ -1.94
PCDHGA1Q9Y5H4 AC091953.2-201ENST00000623979 160 ntBASIC2.91□□□□□ -1.94
PCDHGA1Q9Y5H4 AC068057.2-201ENST00000624047 895 ntBASIC2.91□□□□□ -1.94
PCDHGA1Q9Y5H4 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
PCDHGA1Q9Y5H4 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.91□□□□□ -1.94
PCDHGA1Q9Y5H4 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.91□□□□□ -1.94
PCDHGA1Q9Y5H4 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
PCDHGA1Q9Y5H4 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
PCDHGA1Q9Y5H4 RNY3P13-201ENST00000365542 102 ntBASIC2.9□□□□□ -1.95
PCDHGA1Q9Y5H4 SNORA26.8-201ENST00000391306 124 ntBASIC2.9□□□□□ -1.95
PCDHGA1Q9Y5H4 AL139095.1-201ENST00000404326 391 ntBASIC2.9□□□□□ -1.95
PCDHGA1Q9Y5H4 RN7SKP123-201ENST00000410732 291 ntBASIC2.9□□□□□ -1.95
PCDHGA1Q9Y5H4 NDUFS5P4-201ENST00000412983 318 ntBASIC2.9□□□□□ -1.95
PCDHGA1Q9Y5H4 ELOCP17-201ENST00000414751 326 ntBASIC2.9□□□□□ -1.95
PCDHGA1Q9Y5H4 BX682237.1-201ENST00000415016 335 ntBASIC2.9□□□□□ -1.95
PCDHGA1Q9Y5H4 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC2.9□□□□□ -1.95
PCDHGA1Q9Y5H4 NPM1P11-201ENST00000417106 855 ntBASIC2.9□□□□□ -1.95
PCDHGA1Q9Y5H4 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC2.9□□□□□ -1.95
PCDHGA1Q9Y5H4 HMGB1P27-201ENST00000431429 603 ntBASIC2.9□□□□□ -1.95
PCDHGA1Q9Y5H4 RPS27AP8-201ENST00000452665 445 ntBASIC2.9□□□□□ -1.95
PCDHGA1Q9Y5H4 SCGB1D5P-201ENST00000515134 247 ntBASIC2.9□□□□□ -1.95
PCDHGA1Q9Y5H4 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.9□□□□□ -1.95
PCDHGA1Q9Y5H4 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
PCDHGA1Q9Y5H4 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC2.9□□□□□ -1.95
PCDHGA1Q9Y5H4 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC2.9□□□□□ -1.95
PCDHGA1Q9Y5H4 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC2.9□□□□□ -1.95
PCDHGA1Q9Y5H4 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC2.9□□□□□ -1.95
PCDHGA1Q9Y5H4 AL355877.2-201ENST00000603670 358 ntBASIC2.9□□□□□ -1.95
PCDHGA1Q9Y5H4 AC112191.3-201ENST00000604371 277 ntBASIC2.9□□□□□ -1.95
PCDHGA1Q9Y5H4 RNU6-87P-201ENST00000607561 108 ntBASIC2.9□□□□□ -1.95
PCDHGA1Q9Y5H4 BX664608.1-201ENST00000610519 487 ntBASIC2.9□□□□□ -1.95
PCDHGA1Q9Y5H4 AC034102.8-201ENST00000615146 484 ntBASIC2.9□□□□□ -1.95
PCDHGA1Q9Y5H4 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC2.9□□□□□ -1.95
PCDHGA1Q9Y5H4 AC091903.1-201ENST00000624322 454 ntBASIC2.9□□□□□ -1.95
PCDHGA1Q9Y5H4 AC092104.1-201ENST00000497346 1441 ntBASIC2.9□□□□□ -1.95
PCDHGA1Q9Y5H4 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC2.9□□□□□ -1.95
PCDHGA1Q9Y5H4 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC2.89□□□□□ -1.95
PCDHGA1Q9Y5H4 RNU4-82P-201ENST00000362443 140 ntBASIC2.89□□□□□ -1.95
PCDHGA1Q9Y5H4 U3.11-201ENST00000364476 212 ntBASIC2.89□□□□□ -1.95
PCDHGA1Q9Y5H4 RNU1-109P-201ENST00000383960 147 ntBASIC2.89□□□□□ -1.95
PCDHGA1Q9Y5H4 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC2.89□□□□□ -1.95
PCDHGA1Q9Y5H4 AL021407.1-201ENST00000404531 386 ntBASIC2.89□□□□□ -1.95
PCDHGA1Q9Y5H4 FCF1P10-201ENST00000407590 479 ntBASIC2.89□□□□□ -1.95
PCDHGA1Q9Y5H4 Y_RNA.598-201ENST00000410480 95 ntBASIC2.89□□□□□ -1.95
PCDHGA1Q9Y5H4 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC2.89□□□□□ -1.95
PCDHGA1Q9Y5H4 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC2.89□□□□□ -1.95
PCDHGA1Q9Y5H4 ELOCP14-201ENST00000428070 331 ntBASIC2.89□□□□□ -1.95
PCDHGA1Q9Y5H4 SNRPEP9-201ENST00000436794 238 ntBASIC2.89□□□□□ -1.95
PCDHGA1Q9Y5H4 ELOCP7-201ENST00000439968 331 ntBASIC2.89□□□□□ -1.95
PCDHGA1Q9Y5H4 COX6CP2-201ENST00000444980 225 ntBASIC2.89□□□□□ -1.95
PCDHGA1Q9Y5H4 AL109933.2-201ENST00000452651 260 ntBASIC2.89□□□□□ -1.95
PCDHGA1Q9Y5H4 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC2.89□□□□□ -1.95
PCDHGA1Q9Y5H4 AC010486.3-201ENST00000511602 785 ntBASIC2.89□□□□□ -1.95
PCDHGA1Q9Y5H4 RN7SKP132-201ENST00000516001 208 ntBASIC2.89□□□□□ -1.95
PCDHGA1Q9Y5H4 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC2.89□□□□□ -1.95
PCDHGA1Q9Y5H4 AC007536.1-201ENST00000533382 349 ntBASIC2.89□□□□□ -1.95
PCDHGA1Q9Y5H4 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
PCDHGA1Q9Y5H4 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 96.1 ms