Protein–RNA interactions for Protein: Q9Y3Q4

HCN4, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 4, humanhuman

Predictions only

Length 1,203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN4Q9Y3Q4 MRPL35P1-201ENST00000404272 572 ntBASIC5.12□□□□□ -1.59
HCN4Q9Y3Q4 AP000275.1-201ENST00000411943 390 ntBASIC5.12□□□□□ -1.59
HCN4Q9Y3Q4 AL139156.1-201ENST00000412785 841 ntBASIC5.12□□□□□ -1.59
HCN4Q9Y3Q4 AL592148.1-201ENST00000413568 445 ntBASIC5.12□□□□□ -1.59
HCN4Q9Y3Q4 AL158156.1-201ENST00000422509 473 ntBASIC5.12□□□□□ -1.59
HCN4Q9Y3Q4 AC087650.1-201ENST00000431445 468 ntBASIC5.12□□□□□ -1.59
HCN4Q9Y3Q4 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC5.12□□□□□ -1.59
HCN4Q9Y3Q4 NUTF2P3-201ENST00000448540 384 ntBASIC5.12□□□□□ -1.59
HCN4Q9Y3Q4 AL162591.2-201ENST00000449634 317 ntBASIC5.12□□□□□ -1.59
HCN4Q9Y3Q4 RN7SKP210-201ENST00000459176 261 ntBASIC5.12□□□□□ -1.59
HCN4Q9Y3Q4 AC087190.1-201ENST00000484462 480 ntBASIC5.12□□□□□ -1.59
HCN4Q9Y3Q4 AC107032.1-201ENST00000485945 480 ntBASIC5.12□□□□□ -1.59
HCN4Q9Y3Q4 AC084851.1-201ENST00000529105 249 ntBASIC5.12□□□□□ -1.59
HCN4Q9Y3Q4 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC5.12□□□□□ -1.59
HCN4Q9Y3Q4 AL442163.3-201ENST00000554110 156 ntBASIC5.12□□□□□ -1.59
HCN4Q9Y3Q4 RN7SL290P-201ENST00000578661 300 ntBASIC5.12□□□□□ -1.59
HCN4Q9Y3Q4 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC5.12□□□□□ -1.59
HCN4Q9Y3Q4 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC5.12□□□□□ -1.59
HCN4Q9Y3Q4 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
HCN4Q9Y3Q4 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
HCN4Q9Y3Q4 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC5.12□□□□□ -1.59
HCN4Q9Y3Q4 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC5.12□□□□□ -1.59
HCN4Q9Y3Q4 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
HCN4Q9Y3Q4 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC5.12□□□□□ -1.59
HCN4Q9Y3Q4 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
HCN4Q9Y3Q4 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
HCN4Q9Y3Q4 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC5.11□□□□□ -1.59
HCN4Q9Y3Q4 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC5.11□□□□□ -1.59
HCN4Q9Y3Q4 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC5.11□□□□□ -1.59
HCN4Q9Y3Q4 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC5.11□□□□□ -1.59
HCN4Q9Y3Q4 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC5.11□□□□□ -1.59
HCN4Q9Y3Q4 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
HCN4Q9Y3Q4 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC5.11□□□□□ -1.59
HCN4Q9Y3Q4 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC5.11□□□□□ -1.59
HCN4Q9Y3Q4 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
HCN4Q9Y3Q4 AL590240.1-201ENST00000334118 313 ntBASIC5.11□□□□□ -1.59
HCN4Q9Y3Q4 RNU5A-1-201ENST00000362698 116 ntBASIC5.11□□□□□ -1.59
HCN4Q9Y3Q4 RNU6-827P-201ENST00000365553 106 ntBASIC5.11□□□□□ -1.59
HCN4Q9Y3Q4 RNU6-662P-201ENST00000384253 104 ntBASIC5.11□□□□□ -1.59
HCN4Q9Y3Q4 Y_RNA.464-201ENST00000384282 110 ntBASIC5.11□□□□□ -1.59
HCN4Q9Y3Q4 SNORD56.6-201ENST00000384569 71 ntBASIC5.11□□□□□ -1.59
HCN4Q9Y3Q4 MIR200C-201ENST00000384980 68 ntBASIC5.11□□□□□ -1.59
HCN4Q9Y3Q4 SNORA48.4-201ENST00000391089 134 ntBASIC5.11□□□□□ -1.59
HCN4Q9Y3Q4 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
HCN4Q9Y3Q4 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC5.11□□□□□ -1.59
HCN4Q9Y3Q4 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC5.11□□□□□ -1.59
HCN4Q9Y3Q4 MTCO1P39-201ENST00000426148 480 ntBASIC5.11□□□□□ -1.59
HCN4Q9Y3Q4 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC5.11□□□□□ -1.59
HCN4Q9Y3Q4 HIGD1AP2-201ENST00000446367 280 ntBASIC5.11□□□□□ -1.59
HCN4Q9Y3Q4 AL513124.1-201ENST00000450410 614 ntBASIC5.11□□□□□ -1.59
HCN4Q9Y3Q4 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC5.11□□□□□ -1.59
HCN4Q9Y3Q4 AL445433.1-201ENST00000457507 257 ntBASIC5.11□□□□□ -1.59
HCN4Q9Y3Q4 AL590705.4-201ENST00000532209 134 ntBASIC5.11□□□□□ -1.59
HCN4Q9Y3Q4 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC5.11□□□□□ -1.59
HCN4Q9Y3Q4 AC105254.2-201ENST00000603636 436 ntBASIC5.11□□□□□ -1.59
HCN4Q9Y3Q4 AL161798.1-201ENST00000604630 131 ntBASIC5.11□□□□□ -1.59
HCN4Q9Y3Q4 BX005214.3-202ENST00000619809 325 ntBASIC5.11□□□□□ -1.59
HCN4Q9Y3Q4 AL450472.1-202ENST00000637286 180 ntBASIC5.11□□□□□ -1.59
HCN4Q9Y3Q4 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC5.11□□□□□ -1.59
HCN4Q9Y3Q4 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC5.11□□□□□ -1.59
HCN4Q9Y3Q4 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
HCN4Q9Y3Q4 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC5.11□□□□□ -1.59
HCN4Q9Y3Q4 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
HCN4Q9Y3Q4 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
HCN4Q9Y3Q4 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC5.1□□□□□ -1.59
HCN4Q9Y3Q4 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
HCN4Q9Y3Q4 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
HCN4Q9Y3Q4 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC5.1□□□□□ -1.59
HCN4Q9Y3Q4 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
HCN4Q9Y3Q4 SNORA71.3-201ENST00000362582 128 ntBASIC5.1□□□□□ -1.59
HCN4Q9Y3Q4 Y_RNA.65-201ENST00000362846 100 ntBASIC5.1□□□□□ -1.59
HCN4Q9Y3Q4 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
HCN4Q9Y3Q4 Y_RNA.439-201ENST00000384119 94 ntBASIC5.1□□□□□ -1.59
HCN4Q9Y3Q4 MIR190B-201ENST00000401119 79 ntBASIC5.1□□□□□ -1.59
HCN4Q9Y3Q4 RPS29P13-201ENST00000402041 169 ntBASIC5.1□□□□□ -1.59
HCN4Q9Y3Q4 RNU6-1025P-201ENST00000410629 104 ntBASIC5.1□□□□□ -1.59
HCN4Q9Y3Q4 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC5.1□□□□□ -1.59
HCN4Q9Y3Q4 RPL7AP49-201ENST00000429522 581 ntBASIC5.1□□□□□ -1.59
HCN4Q9Y3Q4 AL591438.1-201ENST00000433508 581 ntBASIC5.1□□□□□ -1.59
HCN4Q9Y3Q4 AL136097.1-201ENST00000456945 913 ntBASIC5.1□□□□□ -1.59
HCN4Q9Y3Q4 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC5.1□□□□□ -1.59
HCN4Q9Y3Q4 AC010469.2-201ENST00000496412 480 ntBASIC5.1□□□□□ -1.59
HCN4Q9Y3Q4 AC022868.1-201ENST00000517767 391 ntBASIC5.1□□□□□ -1.59
HCN4Q9Y3Q4 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC5.1□□□□□ -1.59
HCN4Q9Y3Q4 DEFB108E-201ENST00000524692 240 ntBASIC5.1□□□□□ -1.59
HCN4Q9Y3Q4 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
HCN4Q9Y3Q4 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC5.1□□□□□ -1.59
HCN4Q9Y3Q4 LINC02555-201ENST00000563933 1951 ntBASIC5.1□□□□□ -1.59
HCN4Q9Y3Q4 MIR3936-201ENST00000584304 110 ntBASIC5.1□□□□□ -1.59
HCN4Q9Y3Q4 IPO5P1-202ENST00000600039 287 ntBASIC5.1□□□□□ -1.59
HCN4Q9Y3Q4 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
HCN4Q9Y3Q4 OR56B2P-202ENST00000641377 2453 ntBASIC5.1□□□□□ -1.59
HCN4Q9Y3Q4 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
HCN4Q9Y3Q4 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC5.1□□□□□ -1.59
HCN4Q9Y3Q4 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
HCN4Q9Y3Q4 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC5.1□□□□□ -1.59
HCN4Q9Y3Q4 AC106871.1-201ENST00000568324 3102 ntBASIC5.1□□□□□ -1.59
HCN4Q9Y3Q4 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
HCN4Q9Y3Q4 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
HCN4Q9Y3Q4 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 9.4 ms