Protein–RNA interactions for Protein: Q9Y3I0

RTCB, tRNA-splicing ligase RtcB homolog, humanhuman

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCBQ9Y3I0 TEX41-300ENST00000631048 69 ntTSL 5 BASIC5.33□□□□□ -1.56
RTCBQ9Y3I0 MIR4272-201ENST00000635924 64 ntBASIC5.33□□□□□ -1.56
RTCBQ9Y3I0 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
RTCBQ9Y3I0 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
RTCBQ9Y3I0 MAPK10-304ENST00000641341 3984 ntBASIC5.32□□□□□ -1.56
RTCBQ9Y3I0 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC5.32□□□□□ -1.56
RTCBQ9Y3I0 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC5.32□□□□□ -1.56
RTCBQ9Y3I0 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC5.32□□□□□ -1.56
RTCBQ9Y3I0 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
RTCBQ9Y3I0 RNU6-525P-201ENST00000363685 104 ntBASIC5.32□□□□□ -1.56
RTCBQ9Y3I0 SNORA73.2-201ENST00000364946 201 ntBASIC5.32□□□□□ -1.56
RTCBQ9Y3I0 RNU6-178P-201ENST00000384631 104 ntBASIC5.32□□□□□ -1.56
RTCBQ9Y3I0 RNU6-817P-201ENST00000391083 104 ntBASIC5.32□□□□□ -1.56
RTCBQ9Y3I0 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC5.32□□□□□ -1.56
RTCBQ9Y3I0 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC5.32□□□□□ -1.56
RTCBQ9Y3I0 AC004866.2-201ENST00000438285 481 ntBASIC5.32□□□□□ -1.56
RTCBQ9Y3I0 RPL7L1P1-201ENST00000448259 785 ntBASIC5.32□□□□□ -1.56
RTCBQ9Y3I0 PCMTD1P1-201ENST00000455560 355 ntBASIC5.32□□□□□ -1.56
RTCBQ9Y3I0 RPL7P49-201ENST00000471402 708 ntBASIC5.32□□□□□ -1.56
RTCBQ9Y3I0 IGHV3-76-201ENST00000522465 295 ntBASIC5.32□□□□□ -1.56
RTCBQ9Y3I0 AC006064.5-201ENST00000541782 248 ntBASIC5.32□□□□□ -1.56
RTCBQ9Y3I0 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC5.32□□□□□ -1.56
RTCBQ9Y3I0 AL161756.2-201ENST00000604597 246 ntBASIC5.32□□□□□ -1.56
RTCBQ9Y3I0 AC141273.2-201ENST00000618989 130 ntBASIC5.32□□□□□ -1.56
RTCBQ9Y3I0 AC233263.6-201ENST00000631132 1963 ntBASIC5.32□□□□□ -1.56
RTCBQ9Y3I0 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
RTCBQ9Y3I0 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC5.32□□□□□ -1.56
RTCBQ9Y3I0 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC5.32□□□□□ -1.56
RTCBQ9Y3I0 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
RTCBQ9Y3I0 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC5.32□□□□□ -1.56
RTCBQ9Y3I0 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
RTCBQ9Y3I0 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
RTCBQ9Y3I0 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
RTCBQ9Y3I0 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
RTCBQ9Y3I0 RNA5SP119-201ENST00000362715 117 ntBASIC5.31□□□□□ -1.56
RTCBQ9Y3I0 ACEA_U3.1-201ENST00000363057 217 ntBASIC5.31□□□□□ -1.56
RTCBQ9Y3I0 RNU6-371P-201ENST00000364283 108 ntBASIC5.31□□□□□ -1.56
RTCBQ9Y3I0 RNU6-1303P-201ENST00000364841 107 ntBASIC5.31□□□□□ -1.56
RTCBQ9Y3I0 Y_RNA.577-201ENST00000384794 101 ntBASIC5.31□□□□□ -1.56
RTCBQ9Y3I0 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
RTCBQ9Y3I0 MIR1302-6-201ENST00000408466 90 ntBASIC5.31□□□□□ -1.56
RTCBQ9Y3I0 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC5.31□□□□□ -1.56
RTCBQ9Y3I0 AL691449.1-201ENST00000426570 421 ntBASIC5.31□□□□□ -1.56
RTCBQ9Y3I0 GEMIN8P3-201ENST00000445417 720 ntBASIC5.31□□□□□ -1.56
RTCBQ9Y3I0 SNORD127-201ENST00000458892 86 ntBASIC5.31□□□□□ -1.56
RTCBQ9Y3I0 RPL21P41-201ENST00000459863 264 ntBASIC5.31□□□□□ -1.56
RTCBQ9Y3I0 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC5.31□□□□□ -1.56
RTCBQ9Y3I0 HMGB3P16-201ENST00000508037 287 ntBASIC5.31□□□□□ -1.56
RTCBQ9Y3I0 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC5.31□□□□□ -1.56
RTCBQ9Y3I0 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC5.31□□□□□ -1.56
RTCBQ9Y3I0 AC040926.1-201ENST00000530195 238 ntBASIC5.31□□□□□ -1.56
RTCBQ9Y3I0 AP000889.1-201ENST00000530968 660 ntBASIC5.31□□□□□ -1.56
RTCBQ9Y3I0 RPL23AP97-201ENST00000568955 471 ntBASIC5.31□□□□□ -1.56
RTCBQ9Y3I0 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC5.31□□□□□ -1.56
RTCBQ9Y3I0 MIR4512-201ENST00000583257 77 ntBASIC5.31□□□□□ -1.56
RTCBQ9Y3I0 AC010201.1-201ENST00000605051 540 ntBASIC5.31□□□□□ -1.56
RTCBQ9Y3I0 MTND4LP5-201ENST00000605152 292 ntBASIC5.31□□□□□ -1.56
RTCBQ9Y3I0 AL450472.3-201ENST00000615578 367 ntBASIC5.31□□□□□ -1.56
RTCBQ9Y3I0 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC5.31□□□□□ -1.56
RTCBQ9Y3I0 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC5.31□□□□□ -1.56
RTCBQ9Y3I0 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC5.31□□□□□ -1.56
RTCBQ9Y3I0 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
RTCBQ9Y3I0 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
RTCBQ9Y3I0 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
RTCBQ9Y3I0 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
RTCBQ9Y3I0 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
RTCBQ9Y3I0 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
RTCBQ9Y3I0 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC5.31□□□□□ -1.56
RTCBQ9Y3I0 AC008669.1-201ENST00000565823 2178 ntBASIC5.31□□□□□ -1.56
RTCBQ9Y3I0 AL672167.1-205ENST00000641112 3080 ntBASIC5.3□□□□□ -1.56
RTCBQ9Y3I0 AC010615.1-201ENST00000594254 1764 ntBASIC5.3□□□□□ -1.56
RTCBQ9Y3I0 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC5.3□□□□□ -1.56
RTCBQ9Y3I0 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC5.3□□□□□ -1.56
RTCBQ9Y3I0 RNU6-288P-201ENST00000363690 104 ntBASIC5.3□□□□□ -1.56
RTCBQ9Y3I0 Y_RNA.276-201ENST00000364732 109 ntBASIC5.3□□□□□ -1.56
RTCBQ9Y3I0 RNU6-596P-201ENST00000365395 98 ntBASIC5.3□□□□□ -1.56
RTCBQ9Y3I0 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC5.3□□□□□ -1.56
RTCBQ9Y3I0 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC5.3□□□□□ -1.56
RTCBQ9Y3I0 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC5.3□□□□□ -1.56
RTCBQ9Y3I0 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC5.3□□□□□ -1.56
RTCBQ9Y3I0 AC133473.1-201ENST00000455173 299 ntBASIC5.3□□□□□ -1.56
RTCBQ9Y3I0 RPL23AP31-201ENST00000456160 467 ntBASIC5.3□□□□□ -1.56
RTCBQ9Y3I0 AC018437.1-201ENST00000492214 406 ntBASIC5.3□□□□□ -1.56
RTCBQ9Y3I0 AC093852.1-201ENST00000503587 266 ntBASIC5.3□□□□□ -1.56
RTCBQ9Y3I0 Y_RNA.680-201ENST00000516441 93 ntBASIC5.3□□□□□ -1.56
RTCBQ9Y3I0 RN7SKP258-201ENST00000517151 304 ntBASIC5.3□□□□□ -1.56
RTCBQ9Y3I0 RN7SKP40-201ENST00000517211 242 ntBASIC5.3□□□□□ -1.56
RTCBQ9Y3I0 AC022790.1-201ENST00000522872 204 ntBASIC5.3□□□□□ -1.56
RTCBQ9Y3I0 OR4H12P-201ENST00000556269 907 ntBASIC5.3□□□□□ -1.56
RTCBQ9Y3I0 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC5.3□□□□□ -1.56
RTCBQ9Y3I0 MIR5692A1-201ENST00000580523 69 ntBASIC5.3□□□□□ -1.56
RTCBQ9Y3I0 MIR5188-201ENST00000583467 113 ntBASIC5.3□□□□□ -1.56
RTCBQ9Y3I0 RN7SL435P-201ENST00000584418 282 ntBASIC5.3□□□□□ -1.56
RTCBQ9Y3I0 MIR4275-201ENST00000636486 87 ntBASIC5.3□□□□□ -1.56
RTCBQ9Y3I0 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC5.3□□□□□ -1.56
RTCBQ9Y3I0 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC5.3□□□□□ -1.56
RTCBQ9Y3I0 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
RTCBQ9Y3I0 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC5.3□□□□□ -1.56
RTCBQ9Y3I0 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
RTCBQ9Y3I0 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 104 ms