Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 AL137003.2-201ENST00000606924 2538 ntBASIC3.88□□□□□ -1.79
SSX2IPQ9Y2D8 AC006504.1-201ENST00000562493 3666 ntBASIC3.88□□□□□ -1.79
SSX2IPQ9Y2D8 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
SSX2IPQ9Y2D8 RNU6-845P-201ENST00000362578 103 ntBASIC3.88□□□□□ -1.79
SSX2IPQ9Y2D8 CD3D-202ENST00000392884 476 ntTSL 2 BASIC3.88□□□□□ -1.79
SSX2IPQ9Y2D8 AL359634.1-202ENST00000404721 284 ntBASIC3.88□□□□□ -1.79
SSX2IPQ9Y2D8 RNU6-193P-201ENST00000410977 107 ntBASIC3.88□□□□□ -1.79
SSX2IPQ9Y2D8 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC3.88□□□□□ -1.79
SSX2IPQ9Y2D8 EI24P1-201ENST00000416584 867 ntBASIC3.88□□□□□ -1.79
SSX2IPQ9Y2D8 AC009161.1-201ENST00000417306 376 ntBASIC3.88□□□□□ -1.79
SSX2IPQ9Y2D8 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC3.88□□□□□ -1.79
SSX2IPQ9Y2D8 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC3.88□□□□□ -1.79
SSX2IPQ9Y2D8 AC090774.1-201ENST00000435925 246 ntBASIC3.88□□□□□ -1.79
SSX2IPQ9Y2D8 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC3.88□□□□□ -1.79
SSX2IPQ9Y2D8 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC3.88□□□□□ -1.79
SSX2IPQ9Y2D8 RNU4-29P-201ENST00000515943 174 ntBASIC3.88□□□□□ -1.79
SSX2IPQ9Y2D8 BNIP3P6-201ENST00000549284 499 ntBASIC3.88□□□□□ -1.79
SSX2IPQ9Y2D8 AC093012.1-202ENST00000549403 582 ntBASIC3.88□□□□□ -1.79
SSX2IPQ9Y2D8 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC3.88□□□□□ -1.79
SSX2IPQ9Y2D8 AC010338.1-201ENST00000621823 717 ntBASIC3.88□□□□□ -1.79
SSX2IPQ9Y2D8 AC110801.1-201ENST00000623590 212 ntBASIC3.88□□□□□ -1.79
SSX2IPQ9Y2D8 AC100810.6-201ENST00000638068 285 ntBASIC3.88□□□□□ -1.79
SSX2IPQ9Y2D8 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
SSX2IPQ9Y2D8 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC3.88□□□□□ -1.79
SSX2IPQ9Y2D8 ASNSP3-201ENST00000451989 1306 ntBASIC3.88□□□□□ -1.79
SSX2IPQ9Y2D8 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.88□□□□□ -1.79
SSX2IPQ9Y2D8 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
SSX2IPQ9Y2D8 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
SSX2IPQ9Y2D8 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC3.87□□□□□ -1.79
SSX2IPQ9Y2D8 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC3.87□□□□□ -1.79
SSX2IPQ9Y2D8 AL157700.1-201ENST00000561973 1432 ntBASIC3.87□□□□□ -1.79
SSX2IPQ9Y2D8 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
SSX2IPQ9Y2D8 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
SSX2IPQ9Y2D8 AL139276.1-201ENST00000311910 1001 ntBASIC3.87□□□□□ -1.79
SSX2IPQ9Y2D8 SNORA23-201ENST00000365128 182 ntBASIC3.87□□□□□ -1.79
SSX2IPQ9Y2D8 RNU6-1029P-201ENST00000384109 107 ntBASIC3.87□□□□□ -1.79
SSX2IPQ9Y2D8 RNU6-332P-201ENST00000391193 108 ntBASIC3.87□□□□□ -1.79
SSX2IPQ9Y2D8 TXNP7-201ENST00000406296 293 ntBASIC3.87□□□□□ -1.79
SSX2IPQ9Y2D8 SSXP9-201ENST00000417503 292 ntBASIC3.87□□□□□ -1.79
SSX2IPQ9Y2D8 AC244098.2-201ENST00000422068 99 ntBASIC3.87□□□□□ -1.79
SSX2IPQ9Y2D8 AC091390.3-201ENST00000426478 338 ntBASIC3.87□□□□□ -1.79
SSX2IPQ9Y2D8 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC3.87□□□□□ -1.79
SSX2IPQ9Y2D8 RBMY2UP-201ENST00000453474 324 ntBASIC3.87□□□□□ -1.79
SSX2IPQ9Y2D8 AC004801.2-202ENST00000463559 283 ntBASIC3.87□□□□□ -1.79
SSX2IPQ9Y2D8 RN7SL807P-201ENST00000470923 297 ntBASIC3.87□□□□□ -1.79
SSX2IPQ9Y2D8 AC010631.1-201ENST00000474150 156 ntBASIC3.87□□□□□ -1.79
SSX2IPQ9Y2D8 AC091885.1-201ENST00000506658 268 ntBASIC3.87□□□□□ -1.79
SSX2IPQ9Y2D8 AC005921.1-201ENST00000510589 286 ntBASIC3.87□□□□□ -1.79
SSX2IPQ9Y2D8 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC3.87□□□□□ -1.79
SSX2IPQ9Y2D8 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC3.87□□□□□ -1.79
SSX2IPQ9Y2D8 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC3.87□□□□□ -1.79
SSX2IPQ9Y2D8 NACA-211ENST00000548563 827 ntTSL 5 BASIC3.87□□□□□ -1.79
SSX2IPQ9Y2D8 AC011611.1-201ENST00000552179 197 ntBASIC3.87□□□□□ -1.79
SSX2IPQ9Y2D8 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC3.87□□□□□ -1.79
SSX2IPQ9Y2D8 AC013553.2-201ENST00000604244 589 ntBASIC3.87□□□□□ -1.79
SSX2IPQ9Y2D8 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC3.87□□□□□ -1.79
SSX2IPQ9Y2D8 AL442067.2-201ENST00000614033 363 ntBASIC3.87□□□□□ -1.79
SSX2IPQ9Y2D8 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.87□□□□□ -1.79
SSX2IPQ9Y2D8 AC025034.2-201ENST00000623264 286 ntBASIC3.87□□□□□ -1.79
SSX2IPQ9Y2D8 AC022140.2-201ENST00000623500 188 ntBASIC3.87□□□□□ -1.79
SSX2IPQ9Y2D8 PCNP-208ENST00000627393 136 ntTSL 2 BASIC3.87□□□□□ -1.79
SSX2IPQ9Y2D8 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC3.87□□□□□ -1.79
SSX2IPQ9Y2D8 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.87□□□□□ -1.79
SSX2IPQ9Y2D8 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.87□□□□□ -1.79
SSX2IPQ9Y2D8 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
SSX2IPQ9Y2D8 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.86□□□□□ -1.79
SSX2IPQ9Y2D8 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.86□□□□□ -1.79
SSX2IPQ9Y2D8 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC3.86□□□□□ -1.79
SSX2IPQ9Y2D8 TAB3P1-202ENST00000452645 1634 ntBASIC3.86□□□□□ -1.79
SSX2IPQ9Y2D8 SNORA31-201ENST00000362607 130 ntBASIC3.86□□□□□ -1.79
SSX2IPQ9Y2D8 Y_RNA.142-201ENST00000363491 102 ntBASIC3.86□□□□□ -1.79
SSX2IPQ9Y2D8 RNU6-188P-201ENST00000364207 107 ntBASIC3.86□□□□□ -1.79
SSX2IPQ9Y2D8 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
SSX2IPQ9Y2D8 U3.19-201ENST00000390893 196 ntBASIC3.86□□□□□ -1.79
SSX2IPQ9Y2D8 RNU6-882P-201ENST00000391025 103 ntBASIC3.86□□□□□ -1.79
SSX2IPQ9Y2D8 RNU6-903P-201ENST00000391270 109 ntBASIC3.86□□□□□ -1.79
SSX2IPQ9Y2D8 SOD2P1-201ENST00000396543 562 ntBASIC3.86□□□□□ -1.79
SSX2IPQ9Y2D8 AL162578.1-201ENST00000406202 378 ntBASIC3.86□□□□□ -1.79
SSX2IPQ9Y2D8 RNU6-387P-201ENST00000411331 105 ntBASIC3.86□□□□□ -1.79
SSX2IPQ9Y2D8 EEF1A1P40-201ENST00000412883 573 ntBASIC3.86□□□□□ -1.79
SSX2IPQ9Y2D8 OR6C66P-201ENST00000414917 930 ntBASIC3.86□□□□□ -1.79
SSX2IPQ9Y2D8 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC3.86□□□□□ -1.79
SSX2IPQ9Y2D8 PPP1R11P2-201ENST00000423543 382 ntBASIC3.86□□□□□ -1.79
SSX2IPQ9Y2D8 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC3.86□□□□□ -1.79
SSX2IPQ9Y2D8 AC002075.2-201ENST00000425207 252 ntBASIC3.86□□□□□ -1.79
SSX2IPQ9Y2D8 AC005019.1-201ENST00000436455 431 ntBASIC3.86□□□□□ -1.79
SSX2IPQ9Y2D8 MTND3P16-201ENST00000452205 344 ntBASIC3.86□□□□□ -1.79
SSX2IPQ9Y2D8 RPL23AP11-201ENST00000475260 469 ntBASIC3.86□□□□□ -1.79
SSX2IPQ9Y2D8 AC004062.1-201ENST00000509926 645 ntBASIC3.86□□□□□ -1.79
SSX2IPQ9Y2D8 AC093331.1-201ENST00000521474 169 ntBASIC3.86□□□□□ -1.79
SSX2IPQ9Y2D8 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.86□□□□□ -1.79
SSX2IPQ9Y2D8 AP005435.4-201ENST00000529514 284 ntBASIC3.86□□□□□ -1.79
SSX2IPQ9Y2D8 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC3.86□□□□□ -1.79
SSX2IPQ9Y2D8 MIR4703-201ENST00000577728 79 ntBASIC3.86□□□□□ -1.79
SSX2IPQ9Y2D8 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC3.86□□□□□ -1.79
SSX2IPQ9Y2D8 XIAPP1-201ENST00000603162 600 ntBASIC3.86□□□□□ -1.79
SSX2IPQ9Y2D8 RMST_8.1-201ENST00000610287 165 ntBASIC3.86□□□□□ -1.79
SSX2IPQ9Y2D8 AP003355.3-201ENST00000623465 114 ntBASIC3.86□□□□□ -1.79
SSX2IPQ9Y2D8 AL359697.1-201ENST00000624879 587 ntBASIC3.86□□□□□ -1.79
SSX2IPQ9Y2D8 SNORA50A-202ENST00000629536 136 ntBASIC3.86□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms