Protein–RNA interactions for Protein: Q9UBQ0

VPS29, Vacuolar protein sorting-associated protein 29, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29Q9UBQ0 TRBV25OR9-2-201ENST00000438417 374 ntBASIC1.61□□□□□ -2.15
VPS29Q9UBQ0 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC1.61□□□□□ -2.15
VPS29Q9UBQ0 RPL23AP63-201ENST00000498752 471 ntBASIC1.61□□□□□ -2.15
VPS29Q9UBQ0 AC006499.2-201ENST00000513470 337 ntBASIC1.61□□□□□ -2.15
VPS29Q9UBQ0 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC1.61□□□□□ -2.15
VPS29Q9UBQ0 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC1.61□□□□□ -2.15
VPS29Q9UBQ0 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC1.61□□□□□ -2.15
VPS29Q9UBQ0 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC1.61□□□□□ -2.15
VPS29Q9UBQ0 MIR3122-201ENST00000577243 73 ntBASIC1.61□□□□□ -2.15
VPS29Q9UBQ0 AC090897.2-201ENST00000581715 130 ntBASIC1.61□□□□□ -2.15
VPS29Q9UBQ0 AC124283.4-201ENST00000581815 456 ntBASIC1.61□□□□□ -2.15
VPS29Q9UBQ0 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC1.61□□□□□ -2.15
VPS29Q9UBQ0 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC1.61□□□□□ -2.15
VPS29Q9UBQ0 AL138963.2-201ENST00000605137 226 ntBASIC1.61□□□□□ -2.15
VPS29Q9UBQ0 AC004908.2-201ENST00000609090 574 ntBASIC1.61□□□□□ -2.15
VPS29Q9UBQ0 AC024257.5-201ENST00000612739 531 ntBASIC1.61□□□□□ -2.15
VPS29Q9UBQ0 AC084824.4-201ENST00000620106 731 ntBASIC1.61□□□□□ -2.15
VPS29Q9UBQ0 OR1S1-201ENST00000624470 978 ntBASIC1.61□□□□□ -2.15
VPS29Q9UBQ0 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
VPS29Q9UBQ0 AC005539.1-201ENST00000443768 1479 ntBASIC1.61□□□□□ -2.15
VPS29Q9UBQ0 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
VPS29Q9UBQ0 RNU6-234P-201ENST00000365229 104 ntBASIC1.6□□□□□ -2.15
VPS29Q9UBQ0 Z98749.2-208ENST00000381646 500 ntBASIC1.6□□□□□ -2.15
VPS29Q9UBQ0 MIR147B-201ENST00000390185 80 ntBASIC1.6□□□□□ -2.15
VPS29Q9UBQ0 AL356421.1-201ENST00000403255 413 ntBASIC1.6□□□□□ -2.15
VPS29Q9UBQ0 USP9YP19-201ENST00000412165 485 ntBASIC1.6□□□□□ -2.15
VPS29Q9UBQ0 USP9YP13-201ENST00000417797 480 ntBASIC1.6□□□□□ -2.15
VPS29Q9UBQ0 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC1.6□□□□□ -2.15
VPS29Q9UBQ0 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC1.6□□□□□ -2.15
VPS29Q9UBQ0 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC1.6□□□□□ -2.15
VPS29Q9UBQ0 RPL39P6-201ENST00000448289 150 ntBASIC1.6□□□□□ -2.15
VPS29Q9UBQ0 ATG12P2-201ENST00000456830 416 ntBASIC1.6□□□□□ -2.15
VPS29Q9UBQ0 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC1.6□□□□□ -2.15
VPS29Q9UBQ0 MTND4P2-201ENST00000507767 1203 ntBASIC1.6□□□□□ -2.15
VPS29Q9UBQ0 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
VPS29Q9UBQ0 RNU6-250P-201ENST00000516958 103 ntBASIC1.6□□□□□ -2.15
VPS29Q9UBQ0 SNORA31.23-201ENST00000517219 133 ntBASIC1.6□□□□□ -2.15
VPS29Q9UBQ0 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC1.6□□□□□ -2.15
VPS29Q9UBQ0 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC1.6□□□□□ -2.15
VPS29Q9UBQ0 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC1.6□□□□□ -2.15
VPS29Q9UBQ0 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC1.6□□□□□ -2.15
VPS29Q9UBQ0 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC1.6□□□□□ -2.15
VPS29Q9UBQ0 AC125611.1-201ENST00000549563 229 ntBASIC1.6□□□□□ -2.15
VPS29Q9UBQ0 AC090615.1-201ENST00000577519 154 ntBASIC1.6□□□□□ -2.15
VPS29Q9UBQ0 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC1.6□□□□□ -2.15
VPS29Q9UBQ0 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC1.6□□□□□ -2.15
VPS29Q9UBQ0 AP001269.3-201ENST00000588718 329 ntBASIC1.6□□□□□ -2.15
VPS29Q9UBQ0 AL355297.2-201ENST00000604792 129 ntBASIC1.6□□□□□ -2.15
VPS29Q9UBQ0 AC007038.2-201ENST00000608095 740 ntBASIC1.6□□□□□ -2.15
VPS29Q9UBQ0 AL121652.1-201ENST00000608851 448 ntBASIC1.6□□□□□ -2.15
VPS29Q9UBQ0 AL138478.1-201ENST00000612252 832 ntBASIC1.6□□□□□ -2.15
VPS29Q9UBQ0 AL118556.2-201ENST00000614375 824 ntBASIC1.6□□□□□ -2.15
VPS29Q9UBQ0 AC024581.2-201ENST00000619986 252 ntBASIC1.6□□□□□ -2.15
VPS29Q9UBQ0 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC1.6□□□□□ -2.15
VPS29Q9UBQ0 AC007490.1-201ENST00000624321 703 ntBASIC1.6□□□□□ -2.15
VPS29Q9UBQ0 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC1.6□□□□□ -2.15
VPS29Q9UBQ0 SUCLA2P2-201ENST00000417269 1309 ntBASIC1.6□□□□□ -2.15
VPS29Q9UBQ0 AL359854.1-201ENST00000614203 1594 ntBASIC1.59□□□□□ -2.15
VPS29Q9UBQ0 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC1.59□□□□□ -2.15
VPS29Q9UBQ0 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.59□□□□□ -2.15
VPS29Q9UBQ0 OR5T1-202ENST00000641665 1471 ntAPPRIS P1 BASIC1.59□□□□□ -2.15
VPS29Q9UBQ0 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC1.59□□□□□ -2.15
VPS29Q9UBQ0 MIR506-201ENST00000384998 124 ntBASIC1.59□□□□□ -2.15
VPS29Q9UBQ0 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.59□□□□□ -2.15
VPS29Q9UBQ0 MCTS2P-201ENST00000394552 546 ntBASIC1.59□□□□□ -2.15
VPS29Q9UBQ0 RNU2-63P-201ENST00000410792 194 ntBASIC1.59□□□□□ -2.15
VPS29Q9UBQ0 SNORD56-201ENST00000413522 71 ntBASIC1.59□□□□□ -2.15
VPS29Q9UBQ0 MTCYBP11-201ENST00000447254 1109 ntBASIC1.59□□□□□ -2.15
VPS29Q9UBQ0 snoU109.1-201ENST00000459339 135 ntBASIC1.59□□□□□ -2.15
VPS29Q9UBQ0 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC1.59□□□□□ -2.15
VPS29Q9UBQ0 RPL23AP41-201ENST00000484754 458 ntBASIC1.59□□□□□ -2.15
VPS29Q9UBQ0 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC1.59□□□□□ -2.15
VPS29Q9UBQ0 AC093677.1-201ENST00000514414 678 ntBASIC1.59□□□□□ -2.15
VPS29Q9UBQ0 RNA5SP112-201ENST00000515937 99 ntBASIC1.59□□□□□ -2.15
VPS29Q9UBQ0 OR5AL2P-201ENST00000532185 920 ntBASIC1.59□□□□□ -2.15
VPS29Q9UBQ0 NRBF2P1-201ENST00000587407 859 ntBASIC1.59□□□□□ -2.15
VPS29Q9UBQ0 AC243960.4-201ENST00000600532 288 ntBASIC1.59□□□□□ -2.15
VPS29Q9UBQ0 AL357094.1-201ENST00000603845 844 ntBASIC1.59□□□□□ -2.15
VPS29Q9UBQ0 AC013412.1-201ENST00000610687 192 ntBASIC1.59□□□□□ -2.15
VPS29Q9UBQ0 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC1.59□□□□□ -2.15
VPS29Q9UBQ0 AC002550.2-201ENST00000621246 394 ntBASIC1.59□□□□□ -2.15
VPS29Q9UBQ0 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC1.59□□□□□ -2.15
VPS29Q9UBQ0 AC087821.2-201ENST00000637086 450 ntBASIC1.59□□□□□ -2.15
VPS29Q9UBQ0 AC103710.2-202ENST00000641454 2853 ntBASIC1.59□□□□□ -2.16
VPS29Q9UBQ0 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC1.58□□□□□ -2.16
VPS29Q9UBQ0 RNU1-39P-201ENST00000383897 165 ntBASIC1.58□□□□□ -2.16
VPS29Q9UBQ0 HMGN2P39-201ENST00000398005 273 ntBASIC1.58□□□□□ -2.16
VPS29Q9UBQ0 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC1.58□□□□□ -2.16
VPS29Q9UBQ0 SKA2P1-201ENST00000425592 390 ntBASIC1.58□□□□□ -2.16
VPS29Q9UBQ0 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC1.58□□□□□ -2.16
VPS29Q9UBQ0 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC1.58□□□□□ -2.16
VPS29Q9UBQ0 DNAJC19P4-201ENST00000440115 345 ntBASIC1.58□□□□□ -2.16
VPS29Q9UBQ0 AC034222.1-201ENST00000494052 532 ntBASIC1.58□□□□□ -2.16
VPS29Q9UBQ0 AC010468.3-201ENST00000508225 458 ntBASIC1.58□□□□□ -2.16
VPS29Q9UBQ0 MRPS33P3-201ENST00000513456 322 ntBASIC1.58□□□□□ -2.16
VPS29Q9UBQ0 SNORD19.2-201ENST00000516978 73 ntBASIC1.58□□□□□ -2.16
VPS29Q9UBQ0 AP005639.2-201ENST00000527592 928 ntBASIC1.58□□□□□ -2.16
VPS29Q9UBQ0 AC084851.1-201ENST00000529105 249 ntBASIC1.58□□□□□ -2.16
VPS29Q9UBQ0 AK6P1-201ENST00000540219 478 ntBASIC1.58□□□□□ -2.16
VPS29Q9UBQ0 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.58□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 142.1 ms