Protein–RNA interactions for Protein: Q9NZQ3

NCKIPSD, NCK-interacting protein with SH3 domain, humanhuman

Predictions only

Length 722 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSDQ9NZQ3 C8orf59P2-201ENST00000603441 271 ntBASIC3.52□□□□□ -1.85
NCKIPSDQ9NZQ3 AL121992.2-201ENST00000606262 256 ntBASIC3.52□□□□□ -1.85
NCKIPSDQ9NZQ3 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC3.52□□□□□ -1.85
NCKIPSDQ9NZQ3 AC012531.5-201ENST00000611375 151 ntBASIC3.52□□□□□ -1.85
NCKIPSDQ9NZQ3 AL442067.2-201ENST00000614033 363 ntBASIC3.52□□□□□ -1.85
NCKIPSDQ9NZQ3 Y_RNA.804-201ENST00000615262 101 ntBASIC3.52□□□□□ -1.85
NCKIPSDQ9NZQ3 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC3.52□□□□□ -1.85
NCKIPSDQ9NZQ3 YWHAEP7-203ENST00000622054 312 ntBASIC3.52□□□□□ -1.85
NCKIPSDQ9NZQ3 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.52□□□□□ -1.85
NCKIPSDQ9NZQ3 HSP90AA4P-202ENST00000506915 2228 ntBASIC3.52□□□□□ -1.85
NCKIPSDQ9NZQ3 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.52□□□□□ -1.85
NCKIPSDQ9NZQ3 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
NCKIPSDQ9NZQ3 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.52□□□□□ -1.85
NCKIPSDQ9NZQ3 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
NCKIPSDQ9NZQ3 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
NCKIPSDQ9NZQ3 AC058791.1-201ENST00000608412 3198 ntBASIC3.51□□□□□ -1.85
NCKIPSDQ9NZQ3 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.51□□□□□ -1.85
NCKIPSDQ9NZQ3 MFSD8-236ENST00000641509 4050 ntBASIC3.51□□□□□ -1.85
NCKIPSDQ9NZQ3 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
NCKIPSDQ9NZQ3 RNU6-1097P-201ENST00000363586 107 ntBASIC3.51□□□□□ -1.85
NCKIPSDQ9NZQ3 RNY1P12-201ENST00000364251 105 ntBASIC3.51□□□□□ -1.85
NCKIPSDQ9NZQ3 RNU4-76P-201ENST00000364509 141 ntBASIC3.51□□□□□ -1.85
NCKIPSDQ9NZQ3 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC3.51□□□□□ -1.85
NCKIPSDQ9NZQ3 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC3.51□□□□□ -1.85
NCKIPSDQ9NZQ3 SNORA36C-201ENST00000384289 132 ntBASIC3.51□□□□□ -1.85
NCKIPSDQ9NZQ3 Y_RNA.481-201ENST00000384373 102 ntBASIC3.51□□□□□ -1.85
NCKIPSDQ9NZQ3 MIR1290-201ENST00000408735 78 ntBASIC3.51□□□□□ -1.85
NCKIPSDQ9NZQ3 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.51□□□□□ -1.85
NCKIPSDQ9NZQ3 RPL27AP8-201ENST00000424277 446 ntBASIC3.51□□□□□ -1.85
NCKIPSDQ9NZQ3 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC3.51□□□□□ -1.85
NCKIPSDQ9NZQ3 AC016691.1-201ENST00000441321 413 ntBASIC3.51□□□□□ -1.85
NCKIPSDQ9NZQ3 USP9YP8-201ENST00000441913 500 ntBASIC3.51□□□□□ -1.85
NCKIPSDQ9NZQ3 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC3.51□□□□□ -1.85
NCKIPSDQ9NZQ3 CEACAMP4-201ENST00000457676 421 ntBASIC3.51□□□□□ -1.85
NCKIPSDQ9NZQ3 AL049714.1-201ENST00000466686 347 ntBASIC3.51□□□□□ -1.85
NCKIPSDQ9NZQ3 RN7SL594P-201ENST00000470590 287 ntBASIC3.51□□□□□ -1.85
NCKIPSDQ9NZQ3 AC233702.1-201ENST00000482905 502 ntBASIC3.51□□□□□ -1.85
NCKIPSDQ9NZQ3 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC3.51□□□□□ -1.85
NCKIPSDQ9NZQ3 AC093331.1-201ENST00000521474 169 ntBASIC3.51□□□□□ -1.85
NCKIPSDQ9NZQ3 AC011979.2-201ENST00000527568 352 ntBASIC3.51□□□□□ -1.85
NCKIPSDQ9NZQ3 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC3.51□□□□□ -1.85
NCKIPSDQ9NZQ3 SYF2P1-201ENST00000550658 413 ntBASIC3.51□□□□□ -1.85
NCKIPSDQ9NZQ3 AL355836.1-201ENST00000555951 870 ntBASIC3.51□□□□□ -1.85
NCKIPSDQ9NZQ3 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC3.51□□□□□ -1.85
NCKIPSDQ9NZQ3 AC037471.2-201ENST00000564941 598 ntBASIC3.51□□□□□ -1.85
NCKIPSDQ9NZQ3 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC3.51□□□□□ -1.85
NCKIPSDQ9NZQ3 MIR4293-201ENST00000584305 78 ntBASIC3.51□□□□□ -1.85
NCKIPSDQ9NZQ3 AC098848.2-201ENST00000588023 330 ntBASIC3.51□□□□□ -1.85
NCKIPSDQ9NZQ3 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC3.51□□□□□ -1.85
NCKIPSDQ9NZQ3 BNIP3P9-201ENST00000603714 553 ntBASIC3.51□□□□□ -1.85
NCKIPSDQ9NZQ3 AC009994.1-201ENST00000606889 253 ntBASIC3.51□□□□□ -1.85
NCKIPSDQ9NZQ3 SDR42E1P2-201ENST00000614861 481 ntBASIC3.51□□□□□ -1.85
NCKIPSDQ9NZQ3 AC010133.1-201ENST00000615809 842 ntBASIC3.51□□□□□ -1.85
NCKIPSDQ9NZQ3 SNHG22-203ENST00000617833 660 ntBASIC3.51□□□□□ -1.85
NCKIPSDQ9NZQ3 AC110801.1-201ENST00000623590 212 ntBASIC3.51□□□□□ -1.85
NCKIPSDQ9NZQ3 AC009033.1-201ENST00000624279 431 ntBASIC3.51□□□□□ -1.85
NCKIPSDQ9NZQ3 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.51□□□□□ -1.85
NCKIPSDQ9NZQ3 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.51□□□□□ -1.85
NCKIPSDQ9NZQ3 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.51□□□□□ -1.85
NCKIPSDQ9NZQ3 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.51□□□□□ -1.85
NCKIPSDQ9NZQ3 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.51□□□□□ -1.85
NCKIPSDQ9NZQ3 SDAD1P2-201ENST00000441308 2028 ntBASIC3.51□□□□□ -1.85
NCKIPSDQ9NZQ3 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.51□□□□□ -1.85
NCKIPSDQ9NZQ3 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.51□□□□□ -1.85
NCKIPSDQ9NZQ3 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.51□□□□□ -1.85
NCKIPSDQ9NZQ3 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.5□□□□□ -1.85
NCKIPSDQ9NZQ3 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
NCKIPSDQ9NZQ3 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
NCKIPSDQ9NZQ3 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
NCKIPSDQ9NZQ3 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
NCKIPSDQ9NZQ3 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
NCKIPSDQ9NZQ3 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
NCKIPSDQ9NZQ3 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
NCKIPSDQ9NZQ3 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC3.5□□□□□ -1.85
NCKIPSDQ9NZQ3 SNORD56.2-201ENST00000363242 71 ntBASIC3.5□□□□□ -1.85
NCKIPSDQ9NZQ3 Y_RNA.813-201ENST00000364639 102 ntBASIC3.5□□□□□ -1.85
NCKIPSDQ9NZQ3 SNORA69-201ENST00000383895 132 ntBASIC3.5□□□□□ -1.85
NCKIPSDQ9NZQ3 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
NCKIPSDQ9NZQ3 AL591416.1-201ENST00000404015 867 ntBASIC3.5□□□□□ -1.85
NCKIPSDQ9NZQ3 AL356776.1-201ENST00000406574 447 ntBASIC3.5□□□□□ -1.85
NCKIPSDQ9NZQ3 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC3.5□□□□□ -1.85
NCKIPSDQ9NZQ3 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC3.5□□□□□ -1.85
NCKIPSDQ9NZQ3 MRPL50P2-201ENST00000416821 482 ntBASIC3.5□□□□□ -1.85
NCKIPSDQ9NZQ3 SDCBPP3-201ENST00000419629 891 ntBASIC3.5□□□□□ -1.85
NCKIPSDQ9NZQ3 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC3.5□□□□□ -1.85
NCKIPSDQ9NZQ3 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.5□□□□□ -1.85
NCKIPSDQ9NZQ3 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC3.5□□□□□ -1.85
NCKIPSDQ9NZQ3 AL357552.1-201ENST00000445254 415 ntBASIC3.5□□□□□ -1.85
NCKIPSDQ9NZQ3 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC3.5□□□□□ -1.85
NCKIPSDQ9NZQ3 AC022364.2-201ENST00000457963 554 ntBASIC3.5□□□□□ -1.85
NCKIPSDQ9NZQ3 RPL21P10-201ENST00000463521 490 ntBASIC3.5□□□□□ -1.85
NCKIPSDQ9NZQ3 RPS23P3-201ENST00000470993 430 ntBASIC3.5□□□□□ -1.85
NCKIPSDQ9NZQ3 AC010631.1-201ENST00000474150 156 ntBASIC3.5□□□□□ -1.85
NCKIPSDQ9NZQ3 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC3.5□□□□□ -1.85
NCKIPSDQ9NZQ3 AC008628.2-201ENST00000502605 298 ntBASIC3.5□□□□□ -1.85
NCKIPSDQ9NZQ3 MTCO2P30-201ENST00000503662 364 ntBASIC3.5□□□□□ -1.85
NCKIPSDQ9NZQ3 SNORD27.1-201ENST00000516319 72 ntBASIC3.5□□□□□ -1.85
NCKIPSDQ9NZQ3 SNORA70.16-201ENST00000516390 95 ntBASIC3.5□□□□□ -1.85
NCKIPSDQ9NZQ3 RNU6-410P-201ENST00000517006 107 ntBASIC3.5□□□□□ -1.85
NCKIPSDQ9NZQ3 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC3.5□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 144.4 ms