Protein–RNA interactions for Protein: Q9NZC9

SMARCAL1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1, humanhuman

Predictions only

Length 954 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1Q9NZC9 RNU6-1181P-201ENST00000384191 106 ntBASIC3.27□□□□□ -1.89
SMARCAL1Q9NZC9 Y_RNA.481-201ENST00000384373 102 ntBASIC3.27□□□□□ -1.89
SMARCAL1Q9NZC9 MIR7-3-201ENST00000384898 110 ntBASIC3.27□□□□□ -1.89
SMARCAL1Q9NZC9 MIR558-201ENST00000384920 94 ntBASIC3.27□□□□□ -1.89
SMARCAL1Q9NZC9 AC110754.1-201ENST00000399740 601 ntBASIC3.27□□□□□ -1.89
SMARCAL1Q9NZC9 MRPL50P2-201ENST00000416821 482 ntBASIC3.27□□□□□ -1.89
SMARCAL1Q9NZC9 AL109913.1-201ENST00000421173 514 ntBASIC3.27□□□□□ -1.89
SMARCAL1Q9NZC9 YME1L1P1-201ENST00000429435 297 ntBASIC3.27□□□□□ -1.89
SMARCAL1Q9NZC9 GTF2IP20-201ENST00000431663 360 ntBASIC3.27□□□□□ -1.89
SMARCAL1Q9NZC9 AC090774.1-201ENST00000435925 246 ntBASIC3.27□□□□□ -1.89
SMARCAL1Q9NZC9 AC005019.1-201ENST00000436455 431 ntBASIC3.27□□□□□ -1.89
SMARCAL1Q9NZC9 AC079781.2-201ENST00000446424 169 ntBASIC3.27□□□□□ -1.89
SMARCAL1Q9NZC9 AL162389.1-201ENST00000449233 177 ntBASIC3.27□□□□□ -1.89
SMARCAL1Q9NZC9 AC008155.2-201ENST00000464337 397 ntBASIC3.27□□□□□ -1.89
SMARCAL1Q9NZC9 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
SMARCAL1Q9NZC9 HSPD1P15-201ENST00000505573 1122 ntBASIC3.27□□□□□ -1.89
SMARCAL1Q9NZC9 RNU2-10P-201ENST00000516375 211 ntBASIC3.27□□□□□ -1.89
SMARCAL1Q9NZC9 RNU7-51P-201ENST00000516560 62 ntBASIC3.27□□□□□ -1.89
SMARCAL1Q9NZC9 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC3.27□□□□□ -1.89
SMARCAL1Q9NZC9 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.27□□□□□ -1.89
SMARCAL1Q9NZC9 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC3.27□□□□□ -1.89
SMARCAL1Q9NZC9 AC109635.4-202ENST00000531666 412 ntBASIC3.27□□□□□ -1.89
SMARCAL1Q9NZC9 AC018630.1-201ENST00000541376 925 ntBASIC3.27□□□□□ -1.89
SMARCAL1Q9NZC9 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC3.27□□□□□ -1.89
SMARCAL1Q9NZC9 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC3.27□□□□□ -1.89
SMARCAL1Q9NZC9 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC3.27□□□□□ -1.89
SMARCAL1Q9NZC9 AC107294.3-201ENST00000609211 526 ntBASIC3.27□□□□□ -1.89
SMARCAL1Q9NZC9 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC3.27□□□□□ -1.89
SMARCAL1Q9NZC9 AL603758.1-201ENST00000618654 241 ntBASIC3.27□□□□□ -1.89
SMARCAL1Q9NZC9 MIR6130-201ENST00000619419 109 ntBASIC3.27□□□□□ -1.89
SMARCAL1Q9NZC9 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC3.27□□□□□ -1.89
SMARCAL1Q9NZC9 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC3.27□□□□□ -1.89
SMARCAL1Q9NZC9 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC3.27□□□□□ -1.89
SMARCAL1Q9NZC9 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
SMARCAL1Q9NZC9 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
SMARCAL1Q9NZC9 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC3.27□□□□□ -1.89
SMARCAL1Q9NZC9 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
SMARCAL1Q9NZC9 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
SMARCAL1Q9NZC9 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
SMARCAL1Q9NZC9 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
SMARCAL1Q9NZC9 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
SMARCAL1Q9NZC9 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
SMARCAL1Q9NZC9 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
SMARCAL1Q9NZC9 Y_RNA.573-201ENST00000384763 105 ntBASIC3.26□□□□□ -1.89
SMARCAL1Q9NZC9 RNU6-882P-201ENST00000391025 103 ntBASIC3.26□□□□□ -1.89
SMARCAL1Q9NZC9 AL136372.1-201ENST00000403060 228 ntBASIC3.26□□□□□ -1.89
SMARCAL1Q9NZC9 RNU6-908P-201ENST00000410160 94 ntBASIC3.26□□□□□ -1.89
SMARCAL1Q9NZC9 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC3.26□□□□□ -1.89
SMARCAL1Q9NZC9 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
SMARCAL1Q9NZC9 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC3.26□□□□□ -1.89
SMARCAL1Q9NZC9 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC3.26□□□□□ -1.89
SMARCAL1Q9NZC9 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC3.26□□□□□ -1.89
SMARCAL1Q9NZC9 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC3.26□□□□□ -1.89
SMARCAL1Q9NZC9 MTATP6P16-201ENST00000434543 526 ntBASIC3.26□□□□□ -1.89
SMARCAL1Q9NZC9 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC3.26□□□□□ -1.89
SMARCAL1Q9NZC9 GAPDHP27-201ENST00000447427 1020 ntBASIC3.26□□□□□ -1.89
SMARCAL1Q9NZC9 PRDX3P3-201ENST00000447765 522 ntBASIC3.26□□□□□ -1.89
SMARCAL1Q9NZC9 PRSS3P4-201ENST00000453323 162 ntBASIC3.26□□□□□ -1.89
SMARCAL1Q9NZC9 AC008481.1-201ENST00000463278 396 ntBASIC3.26□□□□□ -1.89
SMARCAL1Q9NZC9 AC091153.1-201ENST00000466297 402 ntBASIC3.26□□□□□ -1.89
SMARCAL1Q9NZC9 AC006512.1-201ENST00000468816 291 ntBASIC3.26□□□□□ -1.89
SMARCAL1Q9NZC9 AC083798.1-201ENST00000472671 131 ntBASIC3.26□□□□□ -1.89
SMARCAL1Q9NZC9 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC3.26□□□□□ -1.89
SMARCAL1Q9NZC9 AP004217.1-201ENST00000480579 346 ntBASIC3.26□□□□□ -1.89
SMARCAL1Q9NZC9 RPL36AP51-201ENST00000487216 318 ntBASIC3.26□□□□□ -1.89
SMARCAL1Q9NZC9 MTND4LP22-201ENST00000508209 276 ntBASIC3.26□□□□□ -1.89
SMARCAL1Q9NZC9 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC3.26□□□□□ -1.89
SMARCAL1Q9NZC9 AC074344.1-201ENST00000512823 224 ntBASIC3.26□□□□□ -1.89
SMARCAL1Q9NZC9 SNORA31.20-201ENST00000517111 133 ntBASIC3.26□□□□□ -1.89
SMARCAL1Q9NZC9 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC3.26□□□□□ -1.89
SMARCAL1Q9NZC9 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC3.26□□□□□ -1.89
SMARCAL1Q9NZC9 AP004371.1-201ENST00000525240 214 ntBASIC3.26□□□□□ -1.89
SMARCAL1Q9NZC9 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC3.26□□□□□ -1.89
SMARCAL1Q9NZC9 HMGB1P6-201ENST00000569046 646 ntBASIC3.26□□□□□ -1.89
SMARCAL1Q9NZC9 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC3.26□□□□□ -1.89
SMARCAL1Q9NZC9 AC008752.3-201ENST00000588113 712 ntBASIC3.26□□□□□ -1.89
SMARCAL1Q9NZC9 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC3.26□□□□□ -1.89
SMARCAL1Q9NZC9 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC3.26□□□□□ -1.89
SMARCAL1Q9NZC9 BNIP3P22-201ENST00000593399 556 ntBASIC3.26□□□□□ -1.89
SMARCAL1Q9NZC9 AC004067.1-201ENST00000608733 700 ntBASIC3.26□□□□□ -1.89
SMARCAL1Q9NZC9 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC3.26□□□□□ -1.89
SMARCAL1Q9NZC9 AC012314.7-201ENST00000619693 93 ntBASIC3.26□□□□□ -1.89
SMARCAL1Q9NZC9 MIR6075-201ENST00000620782 95 ntBASIC3.26□□□□□ -1.89
SMARCAL1Q9NZC9 AC244100.1-202ENST00000621554 382 ntBASIC3.26□□□□□ -1.89
SMARCAL1Q9NZC9 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC3.26□□□□□ -1.89
SMARCAL1Q9NZC9 AC099654.14-201ENST00000638599 341 ntBASIC3.26□□□□□ -1.89
SMARCAL1Q9NZC9 DDX10P1-201ENST00000448545 1933 ntBASIC3.26□□□□□ -1.89
SMARCAL1Q9NZC9 AC004925.1-201ENST00000624256 2706 ntBASIC3.26□□□□□ -1.89
SMARCAL1Q9NZC9 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
SMARCAL1Q9NZC9 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.25□□□□□ -1.89
SMARCAL1Q9NZC9 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
SMARCAL1Q9NZC9 HSPE1P11-201ENST00000339579 310 ntBASIC3.25□□□□□ -1.89
SMARCAL1Q9NZC9 RNU6-223P-201ENST00000362830 107 ntBASIC3.25□□□□□ -1.89
SMARCAL1Q9NZC9 RNU5E-6P-201ENST00000365574 115 ntBASIC3.25□□□□□ -1.89
SMARCAL1Q9NZC9 RNU6-877P-201ENST00000383868 107 ntBASIC3.25□□□□□ -1.89
SMARCAL1Q9NZC9 SNORA69-201ENST00000383895 132 ntBASIC3.25□□□□□ -1.89
SMARCAL1Q9NZC9 RNU6-641P-201ENST00000384006 107 ntBASIC3.25□□□□□ -1.89
SMARCAL1Q9NZC9 RNA5SP129-201ENST00000410276 118 ntBASIC3.25□□□□□ -1.89
SMARCAL1Q9NZC9 NDUFB4P5-201ENST00000415445 361 ntBASIC3.25□□□□□ -1.89
SMARCAL1Q9NZC9 RPL30P16-201ENST00000419341 429 ntBASIC3.25□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 132.4 ms