Protein–RNA interactions for Protein: Q9NTJ3

SMC4, Structural maintenance of chromosomes protein 4, humanhuman

Predictions only

Length 1,288 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4Q9NTJ3 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC3.54□□□□□ -1.84
SMC4Q9NTJ3 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC3.54□□□□□ -1.84
SMC4Q9NTJ3 ASNSP3-201ENST00000451989 1306 ntBASIC3.54□□□□□ -1.84
SMC4Q9NTJ3 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC3.54□□□□□ -1.84
SMC4Q9NTJ3 MIR26A1-201ENST00000362205 77 ntBASIC3.54□□□□□ -1.84
SMC4Q9NTJ3 AL590004.2-201ENST00000404787 371 ntBASIC3.54□□□□□ -1.84
SMC4Q9NTJ3 Y_RNA.598-201ENST00000410480 95 ntBASIC3.54□□□□□ -1.84
SMC4Q9NTJ3 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC3.54□□□□□ -1.84
SMC4Q9NTJ3 MTND1P28-201ENST00000435623 950 ntBASIC3.54□□□□□ -1.84
SMC4Q9NTJ3 MTND4P32-201ENST00000437189 1237 ntBASIC3.54□□□□□ -1.84
SMC4Q9NTJ3 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC3.54□□□□□ -1.84
SMC4Q9NTJ3 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC3.54□□□□□ -1.84
SMC4Q9NTJ3 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC3.54□□□□□ -1.84
SMC4Q9NTJ3 AL122001.1-201ENST00000457027 370 ntBASIC3.54□□□□□ -1.84
SMC4Q9NTJ3 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC3.54□□□□□ -1.84
SMC4Q9NTJ3 AC138853.1-201ENST00000503549 823 ntBASIC3.54□□□□□ -1.84
SMC4Q9NTJ3 AC117522.3-201ENST00000507974 584 ntBASIC3.54□□□□□ -1.84
SMC4Q9NTJ3 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC3.54□□□□□ -1.84
SMC4Q9NTJ3 AC011979.2-201ENST00000527568 352 ntBASIC3.54□□□□□ -1.84
SMC4Q9NTJ3 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC3.54□□□□□ -1.84
SMC4Q9NTJ3 AC128657.1-201ENST00000549459 145 ntBASIC3.54□□□□□ -1.84
SMC4Q9NTJ3 AC068135.2-201ENST00000569293 1028 ntBASIC3.54□□□□□ -1.84
SMC4Q9NTJ3 MIR3605-201ENST00000583214 100 ntBASIC3.54□□□□□ -1.84
SMC4Q9NTJ3 AC119751.7-201ENST00000600494 245 ntBASIC3.54□□□□□ -1.84
SMC4Q9NTJ3 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC3.54□□□□□ -1.84
SMC4Q9NTJ3 AC097065.2-201ENST00000608159 533 ntBASIC3.54□□□□□ -1.84
SMC4Q9NTJ3 AC103710.2-201ENST00000609912 942 ntBASIC3.54□□□□□ -1.84
SMC4Q9NTJ3 FTX_3.1-201ENST00000610451 147 ntBASIC3.54□□□□□ -1.84
SMC4Q9NTJ3 AC004852.3-201ENST00000614131 326 ntBASIC3.54□□□□□ -1.84
SMC4Q9NTJ3 AL161629.2-201ENST00000615347 275 ntBASIC3.54□□□□□ -1.84
SMC4Q9NTJ3 AC099654.13-201ENST00000639774 207 ntBASIC3.54□□□□□ -1.84
SMC4Q9NTJ3 MTND5P29-201ENST00000458676 1807 ntBASIC3.54□□□□□ -1.84
SMC4Q9NTJ3 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC3.53□□□□□ -1.84
SMC4Q9NTJ3 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
SMC4Q9NTJ3 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
SMC4Q9NTJ3 AC092447.7-201ENST00000422212 1621 ntBASIC3.53□□□□□ -1.84
SMC4Q9NTJ3 RNU4-40P-201ENST00000364351 143 ntBASIC3.53□□□□□ -1.84
SMC4Q9NTJ3 RNY4P16-201ENST00000364768 94 ntBASIC3.53□□□□□ -1.84
SMC4Q9NTJ3 RNU4-91P-201ENST00000364778 135 ntBASIC3.53□□□□□ -1.84
SMC4Q9NTJ3 CD24P4-201ENST00000382840 243 ntBASIC3.53□□□□□ -1.84
SMC4Q9NTJ3 RNU6-1027P-201ENST00000383998 107 ntBASIC3.53□□□□□ -1.84
SMC4Q9NTJ3 AL138827.1-201ENST00000402666 306 ntBASIC3.53□□□□□ -1.84
SMC4Q9NTJ3 NDUFS5P1-201ENST00000405668 289 ntBASIC3.53□□□□□ -1.84
SMC4Q9NTJ3 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC3.53□□□□□ -1.84
SMC4Q9NTJ3 SLC44A3-AS1-205ENST00000424505 612 ntBASIC3.53□□□□□ -1.84
SMC4Q9NTJ3 AL365496.1-201ENST00000426885 215 ntBASIC3.53□□□□□ -1.84
SMC4Q9NTJ3 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC3.53□□□□□ -1.84
SMC4Q9NTJ3 AC087499.2-201ENST00000432861 149 ntBASIC3.53□□□□□ -1.84
SMC4Q9NTJ3 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC3.53□□□□□ -1.84
SMC4Q9NTJ3 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC3.53□□□□□ -1.84
SMC4Q9NTJ3 SSXP1-201ENST00000453640 473 ntBASIC3.53□□□□□ -1.84
SMC4Q9NTJ3 SNRPGP9-201ENST00000456025 225 ntBASIC3.53□□□□□ -1.84
SMC4Q9NTJ3 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC3.53□□□□□ -1.84
SMC4Q9NTJ3 RBM43P1-201ENST00000476891 1081 ntBASIC3.53□□□□□ -1.84
SMC4Q9NTJ3 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC3.53□□□□□ -1.84
SMC4Q9NTJ3 AC091965.2-201ENST00000512324 613 ntBASIC3.53□□□□□ -1.84
SMC4Q9NTJ3 SNORA9.3-201ENST00000516383 129 ntBASIC3.53□□□□□ -1.84
SMC4Q9NTJ3 RNU1-103P-201ENST00000516502 125 ntBASIC3.53□□□□□ -1.84
SMC4Q9NTJ3 AHI1-217ENST00000534469 680 ntTSL 3 BASIC3.53□□□□□ -1.84
SMC4Q9NTJ3 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC3.53□□□□□ -1.84
SMC4Q9NTJ3 PIGPP4-201ENST00000584447 307 ntBASIC3.53□□□□□ -1.84
SMC4Q9NTJ3 AL590229.1-201ENST00000603497 542 ntBASIC3.53□□□□□ -1.84
SMC4Q9NTJ3 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
SMC4Q9NTJ3 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.53□□□□□ -1.84
SMC4Q9NTJ3 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
SMC4Q9NTJ3 ANKRD36BP1-201ENST00000358576 1779 ntBASIC3.53□□□□□ -1.84
SMC4Q9NTJ3 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
SMC4Q9NTJ3 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.52□□□□□ -1.85
SMC4Q9NTJ3 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
SMC4Q9NTJ3 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.52□□□□□ -1.85
SMC4Q9NTJ3 FTLP6-201ENST00000355274 422 ntBASIC3.52□□□□□ -1.85
SMC4Q9NTJ3 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
SMC4Q9NTJ3 RNU1-112P-201ENST00000364401 164 ntBASIC3.52□□□□□ -1.85
SMC4Q9NTJ3 SNORD116-9-201ENST00000384000 95 ntBASIC3.52□□□□□ -1.85
SMC4Q9NTJ3 SNORD116-3-201ENST00000384287 95 ntBASIC3.52□□□□□ -1.85
SMC4Q9NTJ3 SNORD116-7-201ENST00000384404 95 ntBASIC3.52□□□□□ -1.85
SMC4Q9NTJ3 SNORD116-5-201ENST00000384462 95 ntBASIC3.52□□□□□ -1.85
SMC4Q9NTJ3 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
SMC4Q9NTJ3 U3.26-201ENST00000391236 204 ntBASIC3.52□□□□□ -1.85
SMC4Q9NTJ3 MIR888-201ENST00000401186 77 ntBASIC3.52□□□□□ -1.85
SMC4Q9NTJ3 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC3.52□□□□□ -1.85
SMC4Q9NTJ3 RAC1P6-201ENST00000423911 575 ntBASIC3.52□□□□□ -1.85
SMC4Q9NTJ3 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC3.52□□□□□ -1.85
SMC4Q9NTJ3 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.52□□□□□ -1.85
SMC4Q9NTJ3 MTCO2P16-201ENST00000436962 677 ntBASIC3.52□□□□□ -1.85
SMC4Q9NTJ3 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC3.52□□□□□ -1.85
SMC4Q9NTJ3 AC107083.1-201ENST00000439643 279 ntBASIC3.52□□□□□ -1.85
SMC4Q9NTJ3 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC3.52□□□□□ -1.85
SMC4Q9NTJ3 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC3.52□□□□□ -1.85
SMC4Q9NTJ3 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC3.52□□□□□ -1.85
SMC4Q9NTJ3 RN7SL432P-201ENST00000484057 298 ntBASIC3.52□□□□□ -1.85
SMC4Q9NTJ3 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC3.52□□□□□ -1.85
SMC4Q9NTJ3 AC097462.2-201ENST00000504623 481 ntBASIC3.52□□□□□ -1.85
SMC4Q9NTJ3 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC3.52□□□□□ -1.85
SMC4Q9NTJ3 AC114797.1-201ENST00000514003 728 ntBASIC3.52□□□□□ -1.85
SMC4Q9NTJ3 RNU2-10P-201ENST00000516375 211 ntBASIC3.52□□□□□ -1.85
SMC4Q9NTJ3 RNA5SP290-201ENST00000517133 127 ntBASIC3.52□□□□□ -1.85
SMC4Q9NTJ3 AP006587.4-201ENST00000526053 529 ntBASIC3.52□□□□□ -1.85
SMC4Q9NTJ3 AP003181.2-201ENST00000528941 181 ntBASIC3.52□□□□□ -1.85
SMC4Q9NTJ3 AP003122.4-201ENST00000530980 758 ntBASIC3.52□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 99.8 ms