Protein–RNA interactions for Protein: Q9NT62

ATG3, Ubiquitin-like-conjugating enzyme ATG3, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3Q9NT62 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC5.17□□□□□ -1.58
ATG3Q9NT62 RPL29P14-201ENST00000495837 428 ntBASIC5.17□□□□□ -1.58
ATG3Q9NT62 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC5.17□□□□□ -1.58
ATG3Q9NT62 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC5.17□□□□□ -1.58
ATG3Q9NT62 SCARNA14-201ENST00000516903 136 ntBASIC5.17□□□□□ -1.58
ATG3Q9NT62 SNORD116.3-201ENST00000517176 78 ntBASIC5.17□□□□□ -1.58
ATG3Q9NT62 DEFB109D-201ENST00000529497 240 ntBASIC5.17□□□□□ -1.58
ATG3Q9NT62 RRN3P3-201ENST00000549207 578 ntBASIC5.17□□□□□ -1.58
ATG3Q9NT62 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC5.17□□□□□ -1.58
ATG3Q9NT62 IGHV3-29-201ENST00000604817 344 ntBASIC5.17□□□□□ -1.58
ATG3Q9NT62 AL021879.1-201ENST00000611756 288 ntBASIC5.17□□□□□ -1.58
ATG3Q9NT62 AC064801.1-201ENST00000612025 407 ntBASIC5.17□□□□□ -1.58
ATG3Q9NT62 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
ATG3Q9NT62 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
ATG3Q9NT62 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC5.17□□□□□ -1.58
ATG3Q9NT62 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
ATG3Q9NT62 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
ATG3Q9NT62 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
ATG3Q9NT62 AC139713.2-215ENST00000641428 5037 ntBASIC5.17□□□□□ -1.58
ATG3Q9NT62 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC5.16□□□□□ -1.58
ATG3Q9NT62 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC5.16□□□□□ -1.58
ATG3Q9NT62 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
ATG3Q9NT62 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC5.16□□□□□ -1.58
ATG3Q9NT62 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
ATG3Q9NT62 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC5.16□□□□□ -1.58
ATG3Q9NT62 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
ATG3Q9NT62 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC5.16□□□□□ -1.58
ATG3Q9NT62 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
ATG3Q9NT62 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
ATG3Q9NT62 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
ATG3Q9NT62 RNU6-562P-201ENST00000362731 107 ntBASIC5.16□□□□□ -1.58
ATG3Q9NT62 RNU6-770P-201ENST00000363929 105 ntBASIC5.16□□□□□ -1.58
ATG3Q9NT62 Y_RNA.428-201ENST00000384078 102 ntBASIC5.16□□□□□ -1.58
ATG3Q9NT62 RNU6-1226P-201ENST00000384317 107 ntBASIC5.16□□□□□ -1.58
ATG3Q9NT62 Y_RNA.483-201ENST00000384380 101 ntBASIC5.16□□□□□ -1.58
ATG3Q9NT62 HDGFP1-201ENST00000405943 252 ntBASIC5.16□□□□□ -1.58
ATG3Q9NT62 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC5.16□□□□□ -1.58
ATG3Q9NT62 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC5.16□□□□□ -1.58
ATG3Q9NT62 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC5.16□□□□□ -1.58
ATG3Q9NT62 PGBD4P6-201ENST00000421501 610 ntBASIC5.16□□□□□ -1.58
ATG3Q9NT62 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC5.16□□□□□ -1.58
ATG3Q9NT62 MTND5P15-201ENST00000434246 349 ntBASIC5.16□□□□□ -1.58
ATG3Q9NT62 HIGD1AP11-201ENST00000438361 280 ntBASIC5.16□□□□□ -1.58
ATG3Q9NT62 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC5.16□□□□□ -1.58
ATG3Q9NT62 AL162388.1-201ENST00000450912 352 ntBASIC5.16□□□□□ -1.58
ATG3Q9NT62 AL353752.1-201ENST00000454946 260 ntBASIC5.16□□□□□ -1.58
ATG3Q9NT62 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC5.16□□□□□ -1.58
ATG3Q9NT62 AC022493.2-201ENST00000506122 481 ntBASIC5.16□□□□□ -1.58
ATG3Q9NT62 RNA5SP384-201ENST00000516615 116 ntBASIC5.16□□□□□ -1.58
ATG3Q9NT62 RN7SKP234-201ENST00000517173 224 ntBASIC5.16□□□□□ -1.58
ATG3Q9NT62 AF186190.1-201ENST00000517470 480 ntBASIC5.16□□□□□ -1.58
ATG3Q9NT62 AC007991.1-201ENST00000522680 631 ntBASIC5.16□□□□□ -1.58
ATG3Q9NT62 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC5.16□□□□□ -1.58
ATG3Q9NT62 AC011979.2-201ENST00000527568 352 ntBASIC5.16□□□□□ -1.58
ATG3Q9NT62 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
ATG3Q9NT62 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
ATG3Q9NT62 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC5.16□□□□□ -1.58
ATG3Q9NT62 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC5.16□□□□□ -1.58
ATG3Q9NT62 AC012314.7-201ENST00000619693 93 ntBASIC5.16□□□□□ -1.58
ATG3Q9NT62 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC5.16□□□□□ -1.58
ATG3Q9NT62 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC5.16□□□□□ -1.58
ATG3Q9NT62 HSP90AA5P-201ENST00000438353 2192 ntBASIC5.16□□□□□ -1.58
ATG3Q9NT62 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC5.16□□□□□ -1.58
ATG3Q9NT62 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC5.16□□□□□ -1.58
ATG3Q9NT62 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
ATG3Q9NT62 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
ATG3Q9NT62 AC097714.1-201ENST00000511272 1647 ntBASIC5.15□□□□□ -1.58
ATG3Q9NT62 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC5.15□□□□□ -1.58
ATG3Q9NT62 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC5.15□□□□□ -1.58
ATG3Q9NT62 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC5.15□□□□□ -1.58
ATG3Q9NT62 ZNF33CP-201ENST00000432492 2030 ntBASIC5.15□□□□□ -1.58
ATG3Q9NT62 RNU6-97P-201ENST00000363387 104 ntBASIC5.15□□□□□ -1.59
ATG3Q9NT62 RNA5SP399-201ENST00000364003 117 ntBASIC5.15□□□□□ -1.59
ATG3Q9NT62 Y_RNA.461-201ENST00000384263 103 ntBASIC5.15□□□□□ -1.59
ATG3Q9NT62 Y_RNA.477-201ENST00000384352 108 ntBASIC5.15□□□□□ -1.59
ATG3Q9NT62 Y_RNA.576-201ENST00000384781 102 ntBASIC5.15□□□□□ -1.59
ATG3Q9NT62 RNU2-38P-201ENST00000410856 79 ntBASIC5.15□□□□□ -1.59
ATG3Q9NT62 CYCSP43-201ENST00000438233 310 ntBASIC5.15□□□□□ -1.59
ATG3Q9NT62 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC5.15□□□□□ -1.59
ATG3Q9NT62 AL392103.1-201ENST00000447000 198 ntBASIC5.15□□□□□ -1.59
ATG3Q9NT62 AL590664.1-201ENST00000448065 339 ntBASIC5.15□□□□□ -1.59
ATG3Q9NT62 AC112492.4-201ENST00000456549 352 ntBASIC5.15□□□□□ -1.59
ATG3Q9NT62 AC104472.2-201ENST00000469035 601 ntBASIC5.15□□□□□ -1.59
ATG3Q9NT62 AL136126.1-201ENST00000473603 402 ntBASIC5.15□□□□□ -1.59
ATG3Q9NT62 AC021382.1-201ENST00000483523 359 ntBASIC5.15□□□□□ -1.59
ATG3Q9NT62 AC068305.1-201ENST00000497406 726 ntBASIC5.15□□□□□ -1.59
ATG3Q9NT62 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC5.15□□□□□ -1.59
ATG3Q9NT62 AC025465.3-201ENST00000510570 311 ntBASIC5.15□□□□□ -1.59
ATG3Q9NT62 AC104057.1-201ENST00000515547 497 ntBASIC5.15□□□□□ -1.59
ATG3Q9NT62 RNU6-189P-201ENST00000516120 101 ntBASIC5.15□□□□□ -1.59
ATG3Q9NT62 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC5.15□□□□□ -1.59
ATG3Q9NT62 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC5.15□□□□□ -1.59
ATG3Q9NT62 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC5.15□□□□□ -1.59
ATG3Q9NT62 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC5.15□□□□□ -1.59
ATG3Q9NT62 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC5.15□□□□□ -1.59
ATG3Q9NT62 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC5.15□□□□□ -1.59
ATG3Q9NT62 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC5.15□□□□□ -1.59
ATG3Q9NT62 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC5.15□□□□□ -1.59
ATG3Q9NT62 SRGNP1-201ENST00000603392 451 ntBASIC5.15□□□□□ -1.59
ATG3Q9NT62 SMCR2_2.1-201ENST00000619783 161 ntBASIC5.15□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 108.1 ms