Protein–RNA interactions for Protein: Q9NR64

KLHL1, Kelch-like protein 1, humanhuman

Predictions only

Length 748 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL1Q9NR64 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC3.2□□□□□ -1.9
KLHL1Q9NR64 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC3.2□□□□□ -1.9
KLHL1Q9NR64 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC3.2□□□□□ -1.9
KLHL1Q9NR64 AL162389.1-201ENST00000449233 177 ntBASIC3.2□□□□□ -1.9
KLHL1Q9NR64 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC3.2□□□□□ -1.9
KLHL1Q9NR64 SNRPGP6-201ENST00000451124 220 ntBASIC3.2□□□□□ -1.9
KLHL1Q9NR64 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC3.2□□□□□ -1.9
KLHL1Q9NR64 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC3.2□□□□□ -1.9
KLHL1Q9NR64 RNU6-579P-201ENST00000516879 102 ntBASIC3.2□□□□□ -1.9
KLHL1Q9NR64 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC3.2□□□□□ -1.9
KLHL1Q9NR64 HMGB1P41-201ENST00000520234 440 ntBASIC3.2□□□□□ -1.9
KLHL1Q9NR64 MAL2-206ENST00000522187 547 ntTSL 4 BASIC3.2□□□□□ -1.9
KLHL1Q9NR64 AP003072.2-201ENST00000527756 676 ntBASIC3.2□□□□□ -1.9
KLHL1Q9NR64 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC3.2□□□□□ -1.9
KLHL1Q9NR64 AC011602.1-201ENST00000546484 331 ntBASIC3.2□□□□□ -1.9
KLHL1Q9NR64 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC3.2□□□□□ -1.9
KLHL1Q9NR64 ARL2BPP2-201ENST00000550907 489 ntBASIC3.2□□□□□ -1.9
KLHL1Q9NR64 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC3.2□□□□□ -1.9
KLHL1Q9NR64 MIR548S-201ENST00000581352 82 ntBASIC3.2□□□□□ -1.9
KLHL1Q9NR64 AF038458.1-201ENST00000588406 262 ntBASIC3.2□□□□□ -1.9
KLHL1Q9NR64 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC3.2□□□□□ -1.9
KLHL1Q9NR64 AP002360.4-201ENST00000606980 481 ntBASIC3.2□□□□□ -1.9
KLHL1Q9NR64 AP001330.5-201ENST00000607176 411 ntBASIC3.2□□□□□ -1.9
KLHL1Q9NR64 AC093788.1-201ENST00000609356 927 ntBASIC3.2□□□□□ -1.9
KLHL1Q9NR64 TUG1_2.1-201ENST00000614234 87 ntBASIC3.2□□□□□ -1.9
KLHL1Q9NR64 U6.42-201ENST00000618440 107 ntBASIC3.2□□□□□ -1.9
KLHL1Q9NR64 FRG1KP-201ENST00000623592 341 ntBASIC3.2□□□□□ -1.9
KLHL1Q9NR64 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
KLHL1Q9NR64 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
KLHL1Q9NR64 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
KLHL1Q9NR64 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
KLHL1Q9NR64 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.2□□□□□ -1.9
KLHL1Q9NR64 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC3.2□□□□□ -1.9
KLHL1Q9NR64 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
KLHL1Q9NR64 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
KLHL1Q9NR64 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.19□□□□□ -1.9
KLHL1Q9NR64 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.19□□□□□ -1.9
KLHL1Q9NR64 Y_RNA.89-201ENST00000363031 102 ntBASIC3.19□□□□□ -1.9
KLHL1Q9NR64 RNU6-511P-201ENST00000363496 107 ntBASIC3.19□□□□□ -1.9
KLHL1Q9NR64 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
KLHL1Q9NR64 MIR558-201ENST00000384920 94 ntBASIC3.19□□□□□ -1.9
KLHL1Q9NR64 RPS4XP8-201ENST00000402039 771 ntBASIC3.19□□□□□ -1.9
KLHL1Q9NR64 FAT1P1-201ENST00000406588 507 ntBASIC3.19□□□□□ -1.9
KLHL1Q9NR64 RNU2-36P-201ENST00000410361 191 ntBASIC3.19□□□□□ -1.9
KLHL1Q9NR64 MRPL50P2-201ENST00000416821 482 ntBASIC3.19□□□□□ -1.9
KLHL1Q9NR64 RPL7P46-201ENST00000425129 740 ntBASIC3.19□□□□□ -1.9
KLHL1Q9NR64 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC3.19□□□□□ -1.9
KLHL1Q9NR64 RPS20P5-201ENST00000434808 360 ntBASIC3.19□□□□□ -1.9
KLHL1Q9NR64 AC005019.1-201ENST00000436455 431 ntBASIC3.19□□□□□ -1.9
KLHL1Q9NR64 RPS15AP9-201ENST00000439856 381 ntBASIC3.19□□□□□ -1.9
KLHL1Q9NR64 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC3.19□□□□□ -1.9
KLHL1Q9NR64 AC016696.1-201ENST00000446949 318 ntBASIC3.19□□□□□ -1.9
KLHL1Q9NR64 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC3.19□□□□□ -1.9
KLHL1Q9NR64 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC3.19□□□□□ -1.9
KLHL1Q9NR64 AC008481.1-201ENST00000463278 396 ntBASIC3.19□□□□□ -1.9
KLHL1Q9NR64 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
KLHL1Q9NR64 AL049874.1-201ENST00000489560 388 ntBASIC3.19□□□□□ -1.9
KLHL1Q9NR64 RNU6-390P-201ENST00000516259 103 ntBASIC3.19□□□□□ -1.9
KLHL1Q9NR64 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC3.19□□□□□ -1.9
KLHL1Q9NR64 AP006245.1-201ENST00000522549 120 ntBASIC3.19□□□□□ -1.9
KLHL1Q9NR64 AC104383.1-201ENST00000530297 370 ntBASIC3.19□□□□□ -1.9
KLHL1Q9NR64 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC3.19□□□□□ -1.9
KLHL1Q9NR64 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC3.19□□□□□ -1.9
KLHL1Q9NR64 MGST1-215ENST00000540056 546 ntTSL 3 BASIC3.19□□□□□ -1.9
KLHL1Q9NR64 AL163153.1-201ENST00000554223 283 ntBASIC3.19□□□□□ -1.9
KLHL1Q9NR64 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC3.19□□□□□ -1.9
KLHL1Q9NR64 AC034105.3-201ENST00000565294 442 ntBASIC3.19□□□□□ -1.9
KLHL1Q9NR64 HMGB1P6-201ENST00000569046 646 ntBASIC3.19□□□□□ -1.9
KLHL1Q9NR64 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC3.19□□□□□ -1.9
KLHL1Q9NR64 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC3.19□□□□□ -1.9
KLHL1Q9NR64 AC004832.5-201ENST00000608677 401 ntBASIC3.19□□□□□ -1.9
KLHL1Q9NR64 AC090132.2-201ENST00000615881 347 ntBASIC3.19□□□□□ -1.9
KLHL1Q9NR64 AC022149.2-201ENST00000621061 203 ntBASIC3.19□□□□□ -1.9
KLHL1Q9NR64 ZNF680P1-201ENST00000436625 1469 ntBASIC3.19□□□□□ -1.9
KLHL1Q9NR64 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
KLHL1Q9NR64 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
KLHL1Q9NR64 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
KLHL1Q9NR64 AC058791.1-201ENST00000608412 3198 ntBASIC3.19□□□□□ -1.9
KLHL1Q9NR64 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.19□□□□□ -1.9
KLHL1Q9NR64 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
KLHL1Q9NR64 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
KLHL1Q9NR64 SNORA23-201ENST00000365128 182 ntBASIC3.18□□□□□ -1.9
KLHL1Q9NR64 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
KLHL1Q9NR64 AP002088.1-201ENST00000382740 395 ntBASIC3.18□□□□□ -1.9
KLHL1Q9NR64 MIR514A1-201ENST00000385133 98 ntBASIC3.18□□□□□ -1.9
KLHL1Q9NR64 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
KLHL1Q9NR64 RPS4XP3-201ENST00000398541 413 ntBASIC3.18□□□□□ -1.9
KLHL1Q9NR64 RNA5SP120-201ENST00000410900 112 ntBASIC3.18□□□□□ -1.9
KLHL1Q9NR64 USP9YP6-201ENST00000413550 854 ntBASIC3.18□□□□□ -1.9
KLHL1Q9NR64 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC3.18□□□□□ -1.9
KLHL1Q9NR64 AC018630.2-202ENST00000422992 927 ntBASIC3.18□□□□□ -1.9
KLHL1Q9NR64 NDUFB4P7-201ENST00000423198 363 ntBASIC3.18□□□□□ -1.9
KLHL1Q9NR64 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.18□□□□□ -1.9
KLHL1Q9NR64 OR2AS1P-201ENST00000427827 319 ntBASIC3.18□□□□□ -1.9
KLHL1Q9NR64 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC3.18□□□□□ -1.9
KLHL1Q9NR64 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC3.18□□□□□ -1.9
KLHL1Q9NR64 AL606489.2-201ENST00000433886 234 ntBASIC3.18□□□□□ -1.9
KLHL1Q9NR64 HIGD1AP11-201ENST00000438361 280 ntBASIC3.18□□□□□ -1.9
KLHL1Q9NR64 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC3.18□□□□□ -1.9
KLHL1Q9NR64 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC3.18□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 82.8 ms