Protein–RNA interactions for Protein: Q9NNX9

VCX3A, Variable charge X-linked protein 3, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3AQ9NNX9 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC1.87□□□□□ -2.11
VCX3AQ9NNX9 RPL21P24-201ENST00000413752 448 ntBASIC1.87□□□□□ -2.11
VCX3AQ9NNX9 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC1.87□□□□□ -2.11
VCX3AQ9NNX9 AC104454.1-201ENST00000421341 1401 ntBASIC1.87□□□□□ -2.11
VCX3AQ9NNX9 GPM6BP2-201ENST00000432046 144 ntBASIC1.87□□□□□ -2.11
VCX3AQ9NNX9 IFNA20P-201ENST00000436840 528 ntBASIC1.87□□□□□ -2.11
VCX3AQ9NNX9 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC1.87□□□□□ -2.11
VCX3AQ9NNX9 GPM6BP1-201ENST00000446387 144 ntBASIC1.87□□□□□ -2.11
VCX3AQ9NNX9 EEF1E1P1-201ENST00000446998 430 ntBASIC1.87□□□□□ -2.11
VCX3AQ9NNX9 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC1.87□□□□□ -2.11
VCX3AQ9NNX9 FABP5P15-201ENST00000453566 214 ntBASIC1.87□□□□□ -2.11
VCX3AQ9NNX9 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
VCX3AQ9NNX9 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
VCX3AQ9NNX9 AC069306.1-201ENST00000507006 843 ntBASIC1.87□□□□□ -2.11
VCX3AQ9NNX9 AC113347.3-201ENST00000509113 148 ntBASIC1.87□□□□□ -2.11
VCX3AQ9NNX9 AC093809.1-201ENST00000509155 340 ntBASIC1.87□□□□□ -2.11
VCX3AQ9NNX9 AC074250.1-201ENST00000511117 192 ntBASIC1.87□□□□□ -2.11
VCX3AQ9NNX9 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
VCX3AQ9NNX9 MRPS33P3-201ENST00000513456 322 ntBASIC1.87□□□□□ -2.11
VCX3AQ9NNX9 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC1.87□□□□□ -2.11
VCX3AQ9NNX9 AC112198.4-201ENST00000515450 351 ntBASIC1.87□□□□□ -2.11
VCX3AQ9NNX9 RNA5SP112-201ENST00000515937 99 ntBASIC1.87□□□□□ -2.11
VCX3AQ9NNX9 RNU6-703P-201ENST00000516946 107 ntBASIC1.87□□□□□ -2.11
VCX3AQ9NNX9 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC1.87□□□□□ -2.11
VCX3AQ9NNX9 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC1.87□□□□□ -2.11
VCX3AQ9NNX9 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC1.87□□□□□ -2.11
VCX3AQ9NNX9 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC1.87□□□□□ -2.11
VCX3AQ9NNX9 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC1.87□□□□□ -2.11
VCX3AQ9NNX9 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC1.87□□□□□ -2.11
VCX3AQ9NNX9 AC007229.1-201ENST00000590455 412 ntBASIC1.87□□□□□ -2.11
VCX3AQ9NNX9 AC112220.2-201ENST00000605513 533 ntBASIC1.87□□□□□ -2.11
VCX3AQ9NNX9 AC006270.3-201ENST00000605967 1036 ntBASIC1.87□□□□□ -2.11
VCX3AQ9NNX9 AC090186.1-201ENST00000605991 572 ntBASIC1.87□□□□□ -2.11
VCX3AQ9NNX9 AC011939.3-201ENST00000613686 466 ntBASIC1.87□□□□□ -2.11
VCX3AQ9NNX9 U4atac.1-201ENST00000618345 95 ntBASIC1.87□□□□□ -2.11
VCX3AQ9NNX9 AC068831.8-201ENST00000620171 435 ntBASIC1.87□□□□□ -2.11
VCX3AQ9NNX9 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC1.87□□□□□ -2.11
VCX3AQ9NNX9 OR8B1P-202ENST00000641132 1178 ntBASIC1.87□□□□□ -2.11
VCX3AQ9NNX9 RNU4-51P-201ENST00000364206 140 ntBASIC1.86□□□□□ -2.11
VCX3AQ9NNX9 XGY1-201ENST00000381172 446 ntBASIC1.86□□□□□ -2.11
VCX3AQ9NNX9 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC1.86□□□□□ -2.11
VCX3AQ9NNX9 SNORD56-201ENST00000413522 71 ntBASIC1.86□□□□□ -2.11
VCX3AQ9NNX9 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC1.86□□□□□ -2.11
VCX3AQ9NNX9 AL445685.2-201ENST00000422551 342 ntBASIC1.86□□□□□ -2.11
VCX3AQ9NNX9 GTF2IP3-201ENST00000433887 494 ntBASIC1.86□□□□□ -2.11
VCX3AQ9NNX9 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC1.86□□□□□ -2.11
VCX3AQ9NNX9 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC1.86□□□□□ -2.11
VCX3AQ9NNX9 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC1.86□□□□□ -2.11
VCX3AQ9NNX9 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC1.86□□□□□ -2.11
VCX3AQ9NNX9 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC1.86□□□□□ -2.11
VCX3AQ9NNX9 PPP1R2P5-201ENST00000457256 603 ntBASIC1.86□□□□□ -2.11
VCX3AQ9NNX9 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC1.86□□□□□ -2.11
VCX3AQ9NNX9 AC005410.1-202ENST00000460347 485 ntBASIC1.86□□□□□ -2.11
VCX3AQ9NNX9 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC1.86□□□□□ -2.11
VCX3AQ9NNX9 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC1.86□□□□□ -2.11
VCX3AQ9NNX9 RNU6-581P-201ENST00000516214 105 ntBASIC1.86□□□□□ -2.11
VCX3AQ9NNX9 SCARNA16.3-201ENST00000516595 184 ntBASIC1.86□□□□□ -2.11
VCX3AQ9NNX9 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC1.86□□□□□ -2.11
VCX3AQ9NNX9 AP003168.1-201ENST00000530091 307 ntBASIC1.86□□□□□ -2.11
VCX3AQ9NNX9 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC1.86□□□□□ -2.11
VCX3AQ9NNX9 AL133153.1-201ENST00000557756 303 ntBASIC1.86□□□□□ -2.11
VCX3AQ9NNX9 AC012435.1-202ENST00000568772 240 ntBASIC1.86□□□□□ -2.11
VCX3AQ9NNX9 AC090079.2-201ENST00000575289 768 ntBASIC1.86□□□□□ -2.11
VCX3AQ9NNX9 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.86□□□□□ -2.11
VCX3AQ9NNX9 AC022202.1-201ENST00000613515 211 ntBASIC1.86□□□□□ -2.11
VCX3AQ9NNX9 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
VCX3AQ9NNX9 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
VCX3AQ9NNX9 RNU1-72P-201ENST00000362976 153 ntBASIC1.85□□□□□ -2.11
VCX3AQ9NNX9 RNU6-853P-201ENST00000364306 107 ntBASIC1.85□□□□□ -2.11
VCX3AQ9NNX9 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC1.85□□□□□ -2.11
VCX3AQ9NNX9 MIR7-3-201ENST00000384898 110 ntBASIC1.85□□□□□ -2.11
VCX3AQ9NNX9 EDDM3CP-201ENST00000415977 425 ntBASIC1.85□□□□□ -2.11
VCX3AQ9NNX9 PTGES3P4-201ENST00000426243 356 ntBASIC1.85□□□□□ -2.11
VCX3AQ9NNX9 ISCA1P1-201ENST00000426679 387 ntBASIC1.85□□□□□ -2.11
VCX3AQ9NNX9 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC1.85□□□□□ -2.11
VCX3AQ9NNX9 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC1.85□□□□□ -2.11
VCX3AQ9NNX9 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC1.85□□□□□ -2.11
VCX3AQ9NNX9 ZNF886P-201ENST00000450781 723 ntBASIC1.85□□□□□ -2.11
VCX3AQ9NNX9 OR6C5P-201ENST00000452388 923 ntBASIC1.85□□□□□ -2.11
VCX3AQ9NNX9 RPL21P134-201ENST00000453468 483 ntBASIC1.85□□□□□ -2.11
VCX3AQ9NNX9 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC1.85□□□□□ -2.11
VCX3AQ9NNX9 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC1.85□□□□□ -2.11
VCX3AQ9NNX9 RPL7P18-201ENST00000478965 734 ntBASIC1.85□□□□□ -2.11
VCX3AQ9NNX9 AC107032.1-201ENST00000485945 480 ntBASIC1.85□□□□□ -2.11
VCX3AQ9NNX9 AC079203.1-201ENST00000487972 404 ntBASIC1.85□□□□□ -2.11
VCX3AQ9NNX9 SUMO2P5-201ENST00000506790 245 ntBASIC1.85□□□□□ -2.11
VCX3AQ9NNX9 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC1.85□□□□□ -2.11
VCX3AQ9NNX9 RN7SKP258-201ENST00000517151 304 ntBASIC1.85□□□□□ -2.11
VCX3AQ9NNX9 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC1.85□□□□□ -2.11
VCX3AQ9NNX9 AC007448.1-201ENST00000582714 234 ntBASIC1.85□□□□□ -2.11
VCX3AQ9NNX9 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC1.85□□□□□ -2.11
VCX3AQ9NNX9 AP001269.3-201ENST00000588718 329 ntBASIC1.85□□□□□ -2.11
VCX3AQ9NNX9 AC004987.4-201ENST00000603383 338 ntBASIC1.85□□□□□ -2.11
VCX3AQ9NNX9 AL355598.1-201ENST00000604169 202 ntBASIC1.85□□□□□ -2.11
VCX3AQ9NNX9 AC012314.7-201ENST00000619693 93 ntBASIC1.85□□□□□ -2.11
VCX3AQ9NNX9 AC123767.1-202ENST00000620407 817 ntBASIC1.85□□□□□ -2.11
VCX3AQ9NNX9 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC1.85□□□□□ -2.11
VCX3AQ9NNX9 AP003400.5-201ENST00000624827 617 ntBASIC1.85□□□□□ -2.11
VCX3AQ9NNX9 AC097655.1-201ENST00000635075 318 ntBASIC1.85□□□□□ -2.11
VCX3AQ9NNX9 AC103710.2-202ENST00000641454 2853 ntBASIC1.85□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 138.2 ms