Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 MTND4LP10-201ENST00000435146 291 ntBASIC3.28□□□□□ -1.88
UPF2Q9HAU5 AL451074.3-201ENST00000437709 472 ntBASIC3.28□□□□□ -1.88
UPF2Q9HAU5 AC073614.1-201ENST00000438690 650 ntBASIC3.28□□□□□ -1.88
UPF2Q9HAU5 MTND1P1-201ENST00000445453 368 ntBASIC3.28□□□□□ -1.88
UPF2Q9HAU5 RPL23AP20-201ENST00000447965 421 ntBASIC3.28□□□□□ -1.88
UPF2Q9HAU5 AC003071.1-201ENST00000451219 789 ntBASIC3.28□□□□□ -1.88
UPF2Q9HAU5 RPL23AP31-201ENST00000456160 467 ntBASIC3.28□□□□□ -1.88
UPF2Q9HAU5 AL359385.1-201ENST00000456509 365 ntBASIC3.28□□□□□ -1.88
UPF2Q9HAU5 snoU13.22-201ENST00000459428 104 ntBASIC3.28□□□□□ -1.88
UPF2Q9HAU5 RPL21P39-201ENST00000463605 483 ntBASIC3.28□□□□□ -1.88
UPF2Q9HAU5 RPL21P93-201ENST00000480465 489 ntBASIC3.28□□□□□ -1.88
UPF2Q9HAU5 AC233702.1-201ENST00000482905 502 ntBASIC3.28□□□□□ -1.88
UPF2Q9HAU5 AC087190.1-201ENST00000484462 480 ntBASIC3.28□□□□□ -1.88
UPF2Q9HAU5 AC093591.1-201ENST00000491435 481 ntBASIC3.28□□□□□ -1.88
UPF2Q9HAU5 RPL21P16-201ENST00000495531 483 ntBASIC3.28□□□□□ -1.88
UPF2Q9HAU5 KLHL2P1-201ENST00000508691 521 ntBASIC3.28□□□□□ -1.88
UPF2Q9HAU5 RNU6-506P-201ENST00000516553 94 ntBASIC3.28□□□□□ -1.88
UPF2Q9HAU5 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC3.28□□□□□ -1.88
UPF2Q9HAU5 AC018630.1-201ENST00000541376 925 ntBASIC3.28□□□□□ -1.88
UPF2Q9HAU5 AC124947.2-202ENST00000552735 133 ntBASIC3.28□□□□□ -1.88
UPF2Q9HAU5 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC3.28□□□□□ -1.88
UPF2Q9HAU5 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC3.28□□□□□ -1.88
UPF2Q9HAU5 OR4K8P-201ENST00000578842 1048 ntBASIC3.28□□□□□ -1.88
UPF2Q9HAU5 AL359999.1-201ENST00000604513 294 ntBASIC3.28□□□□□ -1.88
UPF2Q9HAU5 AC012468.1-201ENST00000604888 430 ntBASIC3.28□□□□□ -1.88
UPF2Q9HAU5 AC103710.1-201ENST00000610003 901 ntBASIC3.28□□□□□ -1.88
UPF2Q9HAU5 AL355810.1-201ENST00000614629 552 ntBASIC3.28□□□□□ -1.88
UPF2Q9HAU5 AC090517.2-201ENST00000614966 680 ntBASIC3.28□□□□□ -1.88
UPF2Q9HAU5 AC010149.2-201ENST00000637608 315 ntBASIC3.28□□□□□ -1.88
UPF2Q9HAU5 AL138713.1-201ENST00000624026 2130 ntBASIC3.28□□□□□ -1.89
UPF2Q9HAU5 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC3.27□□□□□ -1.89
UPF2Q9HAU5 MTND5P1-201ENST00000445440 1375 ntBASIC3.27□□□□□ -1.89
UPF2Q9HAU5 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
UPF2Q9HAU5 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC3.27□□□□□ -1.89
UPF2Q9HAU5 AC092435.3-201ENST00000565538 3654 ntBASIC3.27□□□□□ -1.89
UPF2Q9HAU5 OR4G2P-201ENST00000328113 903 ntBASIC3.27□□□□□ -1.89
UPF2Q9HAU5 RNU5A-6P-201ENST00000384136 116 ntBASIC3.27□□□□□ -1.89
UPF2Q9HAU5 RNU6-1042P-201ENST00000384204 107 ntBASIC3.27□□□□□ -1.89
UPF2Q9HAU5 MIR135A2-201ENST00000384854 100 ntBASIC3.27□□□□□ -1.89
UPF2Q9HAU5 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
UPF2Q9HAU5 RNU6-780P-201ENST00000391030 104 ntBASIC3.27□□□□□ -1.89
UPF2Q9HAU5 CD3D-202ENST00000392884 476 ntTSL 2 BASIC3.27□□□□□ -1.89
UPF2Q9HAU5 RPL23AP32-201ENST00000395315 459 ntBASIC3.27□□□□□ -1.89
UPF2Q9HAU5 RPL17P50-201ENST00000396131 546 ntBASIC3.27□□□□□ -1.89
UPF2Q9HAU5 CALM2P3-201ENST00000400429 449 ntBASIC3.27□□□□□ -1.89
UPF2Q9HAU5 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC3.27□□□□□ -1.89
UPF2Q9HAU5 MTCO2P11-201ENST00000431069 680 ntBASIC3.27□□□□□ -1.89
UPF2Q9HAU5 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC3.27□□□□□ -1.89
UPF2Q9HAU5 RAC1P7-201ENST00000445367 377 ntBASIC3.27□□□□□ -1.89
UPF2Q9HAU5 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC3.27□□□□□ -1.89
UPF2Q9HAU5 AC126182.1-201ENST00000478134 357 ntBASIC3.27□□□□□ -1.89
UPF2Q9HAU5 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC3.27□□□□□ -1.89
UPF2Q9HAU5 UBE2Q2P9-201ENST00000490086 202 ntBASIC3.27□□□□□ -1.89
UPF2Q9HAU5 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC3.27□□□□□ -1.89
UPF2Q9HAU5 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC3.27□□□□□ -1.89
UPF2Q9HAU5 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
UPF2Q9HAU5 AP000907.2-201ENST00000530827 353 ntBASIC3.27□□□□□ -1.89
UPF2Q9HAU5 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC3.27□□□□□ -1.89
UPF2Q9HAU5 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC3.27□□□□□ -1.89
UPF2Q9HAU5 NTS-203ENST00000551529 801 ntTSL 3 BASIC3.27□□□□□ -1.89
UPF2Q9HAU5 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC3.27□□□□□ -1.89
UPF2Q9HAU5 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC3.27□□□□□ -1.89
UPF2Q9HAU5 MIR3167-201ENST00000579623 85 ntBASIC3.27□□□□□ -1.89
UPF2Q9HAU5 MIR3146-201ENST00000580367 79 ntBASIC3.27□□□□□ -1.89
UPF2Q9HAU5 MTATP6P3-201ENST00000581686 676 ntBASIC3.27□□□□□ -1.89
UPF2Q9HAU5 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC3.27□□□□□ -1.89
UPF2Q9HAU5 DUXAP4-201ENST00000603046 613 ntBASIC3.27□□□□□ -1.89
UPF2Q9HAU5 AL391646.1-201ENST00000603860 190 ntBASIC3.27□□□□□ -1.89
UPF2Q9HAU5 YPEL5P2-201ENST00000605553 359 ntBASIC3.27□□□□□ -1.89
UPF2Q9HAU5 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC3.27□□□□□ -1.89
UPF2Q9HAU5 AL159972.1-201ENST00000625150 448 ntBASIC3.27□□□□□ -1.89
UPF2Q9HAU5 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.27□□□□□ -1.89
UPF2Q9HAU5 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
UPF2Q9HAU5 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC3.26□□□□□ -1.89
UPF2Q9HAU5 RNU6-1155P-201ENST00000363554 107 ntBASIC3.26□□□□□ -1.89
UPF2Q9HAU5 RNA5SP387-201ENST00000364226 106 ntBASIC3.26□□□□□ -1.89
UPF2Q9HAU5 RNU6-1283P-201ENST00000365314 105 ntBASIC3.26□□□□□ -1.89
UPF2Q9HAU5 RNA5SP210-201ENST00000391034 120 ntBASIC3.26□□□□□ -1.89
UPF2Q9HAU5 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC3.26□□□□□ -1.89
UPF2Q9HAU5 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC3.26□□□□□ -1.89
UPF2Q9HAU5 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC3.26□□□□□ -1.89
UPF2Q9HAU5 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC3.26□□□□□ -1.89
UPF2Q9HAU5 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC3.26□□□□□ -1.89
UPF2Q9HAU5 OR4K11P-201ENST00000431829 904 ntBASIC3.26□□□□□ -1.89
UPF2Q9HAU5 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC3.26□□□□□ -1.89
UPF2Q9HAU5 TIMM9P1-201ENST00000436122 256 ntBASIC3.26□□□□□ -1.89
UPF2Q9HAU5 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC3.26□□□□□ -1.89
UPF2Q9HAU5 DCLRE1CP1-201ENST00000454630 470 ntBASIC3.26□□□□□ -1.89
UPF2Q9HAU5 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC3.26□□□□□ -1.89
UPF2Q9HAU5 RPS3AP14-201ENST00000483907 780 ntBASIC3.26□□□□□ -1.89
UPF2Q9HAU5 AC010587.1-201ENST00000505809 469 ntBASIC3.26□□□□□ -1.89
UPF2Q9HAU5 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC3.26□□□□□ -1.89
UPF2Q9HAU5 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC3.26□□□□□ -1.89
UPF2Q9HAU5 RNU6-1095P-201ENST00000516148 108 ntBASIC3.26□□□□□ -1.89
UPF2Q9HAU5 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC3.26□□□□□ -1.89
UPF2Q9HAU5 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC3.26□□□□□ -1.89
UPF2Q9HAU5 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC3.26□□□□□ -1.89
UPF2Q9HAU5 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC3.26□□□□□ -1.89
UPF2Q9HAU5 CR383656.7-201ENST00000548164 174 ntBASIC3.26□□□□□ -1.89
UPF2Q9HAU5 AP001094.1-201ENST00000579805 193 ntBASIC3.26□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 132.2 ms