Protein–RNA interactions for Protein: Q9H6U6

BCAS3, Breast carcinoma-amplified sequence 3, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BCAS3Q9H6U6 RNU6-475P-201ENST00000516073 104 ntBASIC4.42□□□□□ -1.7
BCAS3Q9H6U6 RN7SKP277-201ENST00000516895 283 ntBASIC4.42□□□□□ -1.7
BCAS3Q9H6U6 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
BCAS3Q9H6U6 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC4.42□□□□□ -1.7
BCAS3Q9H6U6 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC4.42□□□□□ -1.7
BCAS3Q9H6U6 AC244505.7-201ENST00000599675 272 ntBASIC4.42□□□□□ -1.7
BCAS3Q9H6U6 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC4.42□□□□□ -1.7
BCAS3Q9H6U6 ATP5A1P2-202ENST00000616464 443 ntBASIC4.42□□□□□ -1.7
BCAS3Q9H6U6 PISRT1.1-201ENST00000616930 107 ntBASIC4.42□□□□□ -1.7
BCAS3Q9H6U6 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC4.42□□□□□ -1.7
BCAS3Q9H6U6 AC110801.1-201ENST00000623590 212 ntBASIC4.42□□□□□ -1.7
BCAS3Q9H6U6 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
BCAS3Q9H6U6 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
BCAS3Q9H6U6 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
BCAS3Q9H6U6 AL451142.2-201ENST00000429076 2090 ntBASIC4.42□□□□□ -1.7
BCAS3Q9H6U6 DDX10P1-201ENST00000448545 1933 ntBASIC4.42□□□□□ -1.7
BCAS3Q9H6U6 AC011266.1-201ENST00000624119 3569 ntBASIC4.42□□□□□ -1.7
BCAS3Q9H6U6 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC4.41□□□□□ -1.7
BCAS3Q9H6U6 NEAT1-202ENST00000501122 22743 ntBASIC4.41□□□□□ -1.7
BCAS3Q9H6U6 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
BCAS3Q9H6U6 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
BCAS3Q9H6U6 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
BCAS3Q9H6U6 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
BCAS3Q9H6U6 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC4.41□□□□□ -1.7
BCAS3Q9H6U6 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
BCAS3Q9H6U6 Y_RNA.574-201ENST00000384766 95 ntBASIC4.41□□□□□ -1.7
BCAS3Q9H6U6 PVALB-202ENST00000404171 422 ntTSL 2 BASIC4.41□□□□□ -1.7
BCAS3Q9H6U6 AC008267.5-201ENST00000424928 265 ntBASIC4.41□□□□□ -1.7
BCAS3Q9H6U6 AC093106.2-201ENST00000428212 385 ntBASIC4.41□□□□□ -1.7
BCAS3Q9H6U6 ELOCP18-201ENST00000434209 337 ntBASIC4.41□□□□□ -1.7
BCAS3Q9H6U6 CECR9-201ENST00000453421 199 ntBASIC4.41□□□□□ -1.7
BCAS3Q9H6U6 RPL5P30-201ENST00000465511 891 ntBASIC4.41□□□□□ -1.7
BCAS3Q9H6U6 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC4.41□□□□□ -1.7
BCAS3Q9H6U6 IL7R-208ENST00000511982 612 ntTSL 2 BASIC4.41□□□□□ -1.7
BCAS3Q9H6U6 RNU6-470P-201ENST00000515954 104 ntBASIC4.41□□□□□ -1.7
BCAS3Q9H6U6 RNU4ATAC7P-201ENST00000516280 125 ntBASIC4.41□□□□□ -1.7
BCAS3Q9H6U6 IGKV2D-36-201ENST00000518643 226 ntBASIC4.41□□□□□ -1.7
BCAS3Q9H6U6 PTP4A1P6-201ENST00000531034 478 ntBASIC4.41□□□□□ -1.7
BCAS3Q9H6U6 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC4.41□□□□□ -1.7
BCAS3Q9H6U6 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.41□□□□□ -1.7
BCAS3Q9H6U6 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC4.41□□□□□ -1.7
BCAS3Q9H6U6 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC4.41□□□□□ -1.7
BCAS3Q9H6U6 AC087499.8-201ENST00000578406 226 ntBASIC4.41□□□□□ -1.7
BCAS3Q9H6U6 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC4.41□□□□□ -1.7
BCAS3Q9H6U6 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC4.41□□□□□ -1.7
BCAS3Q9H6U6 AC073539.2-201ENST00000597113 165 ntBASIC4.41□□□□□ -1.7
BCAS3Q9H6U6 MIR6128-201ENST00000615528 109 ntBASIC4.41□□□□□ -1.7
BCAS3Q9H6U6 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC4.41□□□□□ -1.7
BCAS3Q9H6U6 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
BCAS3Q9H6U6 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC4.41□□□□□ -1.7
BCAS3Q9H6U6 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
BCAS3Q9H6U6 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
BCAS3Q9H6U6 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
BCAS3Q9H6U6 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC4.41□□□□□ -1.7
BCAS3Q9H6U6 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC4.4□□□□□ -1.7
BCAS3Q9H6U6 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.7
BCAS3Q9H6U6 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC4.4□□□□□ -1.7
BCAS3Q9H6U6 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
BCAS3Q9H6U6 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
BCAS3Q9H6U6 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
BCAS3Q9H6U6 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.4□□□□□ -1.7
BCAS3Q9H6U6 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC4.4□□□□□ -1.71
BCAS3Q9H6U6 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
BCAS3Q9H6U6 Y_RNA.153-201ENST00000363615 91 ntBASIC4.4□□□□□ -1.71
BCAS3Q9H6U6 SET-203ENST00000372688 801 ntTSL 2 BASIC4.4□□□□□ -1.71
BCAS3Q9H6U6 Y_RNA.404-201ENST00000383978 102 ntBASIC4.4□□□□□ -1.71
BCAS3Q9H6U6 Y_RNA.527-201ENST00000384573 102 ntBASIC4.4□□□□□ -1.71
BCAS3Q9H6U6 MIR449B-201ENST00000384995 97 ntBASIC4.4□□□□□ -1.71
BCAS3Q9H6U6 Y_RNA.594-201ENST00000410373 140 ntBASIC4.4□□□□□ -1.71
BCAS3Q9H6U6 RNA5SP306-201ENST00000411087 107 ntBASIC4.4□□□□□ -1.71
BCAS3Q9H6U6 AC093578.1-201ENST00000415219 368 ntBASIC4.4□□□□□ -1.71
BCAS3Q9H6U6 TRAPPC2P10-201ENST00000415662 323 ntBASIC4.4□□□□□ -1.71
BCAS3Q9H6U6 UBE2FP1-201ENST00000416536 447 ntBASIC4.4□□□□□ -1.71
BCAS3Q9H6U6 AC096644.2-201ENST00000429278 159 ntBASIC4.4□□□□□ -1.71
BCAS3Q9H6U6 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC4.4□□□□□ -1.71
BCAS3Q9H6U6 AL133547.1-201ENST00000448546 220 ntBASIC4.4□□□□□ -1.71
BCAS3Q9H6U6 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC4.4□□□□□ -1.71
BCAS3Q9H6U6 AP001086.1-201ENST00000494882 321 ntBASIC4.4□□□□□ -1.71
BCAS3Q9H6U6 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC4.4□□□□□ -1.71
BCAS3Q9H6U6 AC005798.1-201ENST00000513715 387 ntBASIC4.4□□□□□ -1.71
BCAS3Q9H6U6 Y_RNA.670-201ENST00000516255 105 ntBASIC4.4□□□□□ -1.71
BCAS3Q9H6U6 AC009812.2-201ENST00000517657 457 ntBASIC4.4□□□□□ -1.71
BCAS3Q9H6U6 IL7-206ENST00000520269 456 ntTSL 3 BASIC4.4□□□□□ -1.71
BCAS3Q9H6U6 STX3-204ENST00000530221 534 ntTSL 5 BASIC4.4□□□□□ -1.71
BCAS3Q9H6U6 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.71
BCAS3Q9H6U6 MYL12BP1-201ENST00000569826 507 ntBASIC4.4□□□□□ -1.71
BCAS3Q9H6U6 AC113195.1-201ENST00000579952 141 ntBASIC4.4□□□□□ -1.71
BCAS3Q9H6U6 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC4.4□□□□□ -1.71
BCAS3Q9H6U6 ATP1B3P1-201ENST00000605365 821 ntBASIC4.4□□□□□ -1.71
BCAS3Q9H6U6 AC009229.3-201ENST00000608056 282 ntBASIC4.4□□□□□ -1.71
BCAS3Q9H6U6 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC4.4□□□□□ -1.71
BCAS3Q9H6U6 AC092608.2-201ENST00000624427 218 ntBASIC4.4□□□□□ -1.71
BCAS3Q9H6U6 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC4.4□□□□□ -1.71
BCAS3Q9H6U6 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.71
BCAS3Q9H6U6 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
BCAS3Q9H6U6 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.71
BCAS3Q9H6U6 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC4.4□□□□□ -1.71
BCAS3Q9H6U6 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
BCAS3Q9H6U6 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
BCAS3Q9H6U6 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 90.6 ms