Protein–RNA interactions for Protein: Q9H4P4

RNF41, E3 ubiquitin-protein ligase NRDP1, humanhuman

Predicted RBP Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41Q9H4P4 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC2.74□□□□□ -1.97
RNF41Q9H4P4 MIR514A1-201ENST00000385133 98 ntBASIC2.74□□□□□ -1.97
RNF41Q9H4P4 CD3D-202ENST00000392884 476 ntTSL 2 BASIC2.74□□□□□ -1.97
RNF41Q9H4P4 RNA5SP38-201ENST00000410750 119 ntBASIC2.74□□□□□ -1.97
RNF41Q9H4P4 RNU4-53P-201ENST00000410828 140 ntBASIC2.74□□□□□ -1.97
RNF41Q9H4P4 RPL19P1-201ENST00000411635 428 ntBASIC2.74□□□□□ -1.97
RNF41Q9H4P4 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC2.74□□□□□ -1.97
RNF41Q9H4P4 AL096701.2-201ENST00000416920 238 ntBASIC2.74□□□□□ -1.97
RNF41Q9H4P4 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC2.74□□□□□ -1.97
RNF41Q9H4P4 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC2.74□□□□□ -1.97
RNF41Q9H4P4 NDUFB4P6-201ENST00000436819 366 ntBASIC2.74□□□□□ -1.97
RNF41Q9H4P4 BMI1P1-201ENST00000445879 941 ntBASIC2.74□□□□□ -1.97
RNF41Q9H4P4 RPS27AP8-201ENST00000452665 445 ntBASIC2.74□□□□□ -1.97
RNF41Q9H4P4 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC2.74□□□□□ -1.97
RNF41Q9H4P4 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC2.74□□□□□ -1.97
RNF41Q9H4P4 AC104472.2-201ENST00000469035 601 ntBASIC2.74□□□□□ -1.97
RNF41Q9H4P4 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC2.74□□□□□ -1.97
RNF41Q9H4P4 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC2.74□□□□□ -1.97
RNF41Q9H4P4 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.74□□□□□ -1.97
RNF41Q9H4P4 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC2.74□□□□□ -1.97
RNF41Q9H4P4 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC2.74□□□□□ -1.97
RNF41Q9H4P4 AC123904.2-201ENST00000548059 300 ntBASIC2.74□□□□□ -1.97
RNF41Q9H4P4 ZNF519P3-201ENST00000557158 1032 ntBASIC2.74□□□□□ -1.97
RNF41Q9H4P4 TPMTP1-201ENST00000592307 737 ntBASIC2.74□□□□□ -1.97
RNF41Q9H4P4 AL645944.1-201ENST00000603857 493 ntBASIC2.74□□□□□ -1.97
RNF41Q9H4P4 AC013553.2-201ENST00000604244 589 ntBASIC2.74□□□□□ -1.97
RNF41Q9H4P4 AC108747.1-201ENST00000609508 535 ntBASIC2.74□□□□□ -1.97
RNF41Q9H4P4 OR10AB1P-201ENST00000609613 938 ntBASIC2.74□□□□□ -1.97
RNF41Q9H4P4 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC2.74□□□□□ -1.97
RNF41Q9H4P4 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC2.74□□□□□ -1.97
RNF41Q9H4P4 AC027807.2-201ENST00000616099 408 ntBASIC2.74□□□□□ -1.97
RNF41Q9H4P4 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC2.74□□□□□ -1.97
RNF41Q9H4P4 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC2.74□□□□□ -1.97
RNF41Q9H4P4 AL159972.1-201ENST00000625150 448 ntBASIC2.74□□□□□ -1.97
RNF41Q9H4P4 AC093591.3-201ENST00000634516 308 ntBASIC2.74□□□□□ -1.97
RNF41Q9H4P4 DDX10P1-201ENST00000448545 1933 ntBASIC2.74□□□□□ -1.97
RNF41Q9H4P4 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC2.73□□□□□ -1.97
RNF41Q9H4P4 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
RNF41Q9H4P4 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC2.73□□□□□ -1.97
RNF41Q9H4P4 SDAD1P2-201ENST00000441308 2028 ntBASIC2.73□□□□□ -1.97
RNF41Q9H4P4 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.73□□□□□ -1.97
RNF41Q9H4P4 AC008568.2-201ENST00000623862 2313 ntBASIC2.73□□□□□ -1.97
RNF41Q9H4P4 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
RNF41Q9H4P4 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
RNF41Q9H4P4 RNU5A-1-201ENST00000362698 116 ntBASIC2.73□□□□□ -1.97
RNF41Q9H4P4 RNU6-223P-201ENST00000362830 107 ntBASIC2.73□□□□□ -1.97
RNF41Q9H4P4 CD24P4-201ENST00000382840 243 ntBASIC2.73□□□□□ -1.97
RNF41Q9H4P4 RNU6-432P-201ENST00000384196 109 ntBASIC2.73□□□□□ -1.97
RNF41Q9H4P4 RNU6-809P-201ENST00000384461 107 ntBASIC2.73□□□□□ -1.97
RNF41Q9H4P4 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC2.73□□□□□ -1.97
RNF41Q9H4P4 USP9YP13-201ENST00000417797 480 ntBASIC2.73□□□□□ -1.97
RNF41Q9H4P4 CYCSP46-201ENST00000423569 204 ntBASIC2.73□□□□□ -1.97
RNF41Q9H4P4 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC2.73□□□□□ -1.97
RNF41Q9H4P4 RPS15AP28-201ENST00000435088 386 ntBASIC2.73□□□□□ -1.97
RNF41Q9H4P4 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC2.73□□□□□ -1.97
RNF41Q9H4P4 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC2.73□□□□□ -1.97
RNF41Q9H4P4 RNA5SP281-201ENST00000516504 135 ntBASIC2.73□□□□□ -1.97
RNF41Q9H4P4 NRON-201ENST00000517270 370 ntBASIC2.73□□□□□ -1.97
RNF41Q9H4P4 HSPE1P20-201ENST00000538133 289 ntBASIC2.73□□□□□ -1.97
RNF41Q9H4P4 AL356432.3-201ENST00000568952 465 ntBASIC2.73□□□□□ -1.97
RNF41Q9H4P4 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC2.73□□□□□ -1.97
RNF41Q9H4P4 MIR4293-201ENST00000584305 78 ntBASIC2.73□□□□□ -1.97
RNF41Q9H4P4 CLIC4P2-201ENST00000601934 717 ntBASIC2.73□□□□□ -1.97
RNF41Q9H4P4 AC012065.4-201ENST00000602445 679 ntBASIC2.73□□□□□ -1.97
RNF41Q9H4P4 AC105129.3-201ENST00000605455 485 ntBASIC2.73□□□□□ -1.97
RNF41Q9H4P4 AL031775.1-201ENST00000607014 887 ntBASIC2.73□□□□□ -1.97
RNF41Q9H4P4 AC007038.2-201ENST00000608095 740 ntBASIC2.73□□□□□ -1.97
RNF41Q9H4P4 AC092140.2-201ENST00000618027 521 ntBASIC2.73□□□□□ -1.97
RNF41Q9H4P4 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
RNF41Q9H4P4 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC2.73□□□□□ -1.97
RNF41Q9H4P4 MIR4275-201ENST00000636486 87 ntBASIC2.73□□□□□ -1.97
RNF41Q9H4P4 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
RNF41Q9H4P4 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
RNF41Q9H4P4 SNORA14A-201ENST00000364773 135 ntBASIC2.72□□□□□ -1.97
RNF41Q9H4P4 AL109755.1-201ENST00000401791 649 ntBASIC2.72□□□□□ -1.97
RNF41Q9H4P4 UBE2FP1-201ENST00000416536 447 ntBASIC2.72□□□□□ -1.97
RNF41Q9H4P4 AC009518.2-201ENST00000418056 731 ntBASIC2.72□□□□□ -1.97
RNF41Q9H4P4 AL139413.1-201ENST00000421309 217 ntBASIC2.72□□□□□ -1.97
RNF41Q9H4P4 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC2.72□□□□□ -1.97
RNF41Q9H4P4 AL353777.1-201ENST00000425552 326 ntBASIC2.72□□□□□ -1.97
RNF41Q9H4P4 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC2.72□□□□□ -1.97
RNF41Q9H4P4 AC008850.1-201ENST00000427546 362 ntBASIC2.72□□□□□ -1.97
RNF41Q9H4P4 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC2.72□□□□□ -1.97
RNF41Q9H4P4 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC2.72□□□□□ -1.97
RNF41Q9H4P4 AC005094.1-201ENST00000440420 368 ntBASIC2.72□□□□□ -1.97
RNF41Q9H4P4 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC2.72□□□□□ -1.97
RNF41Q9H4P4 UBE2D3P4-201ENST00000441973 436 ntBASIC2.72□□□□□ -1.97
RNF41Q9H4P4 MTCO3P45-201ENST00000443036 613 ntBASIC2.72□□□□□ -1.97
RNF41Q9H4P4 ANKRD26P2-201ENST00000445530 1710 ntBASIC2.72□□□□□ -1.97
RNF41Q9H4P4 COX6CP12-201ENST00000446748 202 ntBASIC2.72□□□□□ -1.97
RNF41Q9H4P4 AL049714.1-201ENST00000466686 347 ntBASIC2.72□□□□□ -1.97
RNF41Q9H4P4 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC2.72□□□□□ -1.97
RNF41Q9H4P4 AP000797.1-201ENST00000478870 387 ntBASIC2.72□□□□□ -1.97
RNF41Q9H4P4 RPL23AP94-201ENST00000512518 302 ntBASIC2.72□□□□□ -1.97
RNF41Q9H4P4 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC2.72□□□□□ -1.97
RNF41Q9H4P4 SCARNA15.2-201ENST00000516409 127 ntBASIC2.72□□□□□ -1.97
RNF41Q9H4P4 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC2.72□□□□□ -1.97
RNF41Q9H4P4 AP000907.2-201ENST00000530827 353 ntBASIC2.72□□□□□ -1.97
RNF41Q9H4P4 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC2.72□□□□□ -1.97
RNF41Q9H4P4 AC009063.1-201ENST00000563342 702 ntBASIC2.72□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 125.1 ms