Protein–RNA interactions for Protein: Q9C0I3

CCSER1, Serine-rich coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1Q9C0I3 RNA5SP290-201ENST00000517133 127 ntBASIC2.73□□□□□ -1.97
CCSER1Q9C0I3 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC2.73□□□□□ -1.97
CCSER1Q9C0I3 ZNF321P-202ENST00000550843 495 ntBASIC2.73□□□□□ -1.97
CCSER1Q9C0I3 MIR5194-201ENST00000582634 120 ntBASIC2.73□□□□□ -1.97
CCSER1Q9C0I3 OR1M4P-201ENST00000589199 287 ntBASIC2.73□□□□□ -1.97
CCSER1Q9C0I3 AC067747.1-201ENST00000608026 250 ntBASIC2.73□□□□□ -1.97
CCSER1Q9C0I3 AC245517.5-201ENST00000611529 162 ntBASIC2.73□□□□□ -1.97
CCSER1Q9C0I3 AL607023.1-201ENST00000620045 248 ntBASIC2.73□□□□□ -1.97
CCSER1Q9C0I3 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.73□□□□□ -1.97
CCSER1Q9C0I3 AC017037.3-201ENST00000625016 472 ntBASIC2.73□□□□□ -1.97
CCSER1Q9C0I3 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC2.73□□□□□ -1.97
CCSER1Q9C0I3 AC097655.1-201ENST00000635075 318 ntBASIC2.73□□□□□ -1.97
CCSER1Q9C0I3 AC103706.2-201ENST00000638080 240 ntBASIC2.73□□□□□ -1.97
CCSER1Q9C0I3 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.73□□□□□ -1.97
CCSER1Q9C0I3 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC2.73□□□□□ -1.97
CCSER1Q9C0I3 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
CCSER1Q9C0I3 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
CCSER1Q9C0I3 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.72□□□□□ -1.97
CCSER1Q9C0I3 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.72□□□□□ -1.97
CCSER1Q9C0I3 MIR21-201ENST00000362134 72 ntBASIC2.72□□□□□ -1.97
CCSER1Q9C0I3 RNU6-1200P-201ENST00000384162 107 ntBASIC2.72□□□□□ -1.97
CCSER1Q9C0I3 AC098592.1-201ENST00000419352 333 ntBASIC2.72□□□□□ -1.97
CCSER1Q9C0I3 SUMO1P4-201ENST00000429430 302 ntBASIC2.72□□□□□ -1.97
CCSER1Q9C0I3 HMGB1P9-201ENST00000429856 646 ntBASIC2.72□□□□□ -1.97
CCSER1Q9C0I3 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC2.72□□□□□ -1.97
CCSER1Q9C0I3 AC020550.1-201ENST00000447385 163 ntBASIC2.72□□□□□ -1.97
CCSER1Q9C0I3 AC098826.2-201ENST00000452011 651 ntBASIC2.72□□□□□ -1.97
CCSER1Q9C0I3 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC2.72□□□□□ -1.97
CCSER1Q9C0I3 AC027673.1-201ENST00000456245 405 ntBASIC2.72□□□□□ -1.97
CCSER1Q9C0I3 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC2.72□□□□□ -1.97
CCSER1Q9C0I3 RPL23AP41-201ENST00000484754 458 ntBASIC2.72□□□□□ -1.97
CCSER1Q9C0I3 AC104685.1-201ENST00000502445 371 ntBASIC2.72□□□□□ -1.97
CCSER1Q9C0I3 SUMO2P6-201ENST00000505273 288 ntBASIC2.72□□□□□ -1.97
CCSER1Q9C0I3 HSPE1P23-201ENST00000509838 286 ntBASIC2.72□□□□□ -1.97
CCSER1Q9C0I3 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC2.72□□□□□ -1.97
CCSER1Q9C0I3 MTCYBP43-201ENST00000513621 740 ntBASIC2.72□□□□□ -1.97
CCSER1Q9C0I3 AC109329.2-201ENST00000519658 482 ntBASIC2.72□□□□□ -1.97
CCSER1Q9C0I3 COX6CP5-201ENST00000527162 228 ntBASIC2.72□□□□□ -1.97
CCSER1Q9C0I3 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC2.72□□□□□ -1.97
CCSER1Q9C0I3 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC2.72□□□□□ -1.97
CCSER1Q9C0I3 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC2.72□□□□□ -1.97
CCSER1Q9C0I3 ELOCP32-201ENST00000548625 324 ntBASIC2.72□□□□□ -1.97
CCSER1Q9C0I3 NACAP3-201ENST00000552100 481 ntBASIC2.72□□□□□ -1.97
CCSER1Q9C0I3 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC2.72□□□□□ -1.97
CCSER1Q9C0I3 AL133153.1-201ENST00000557756 303 ntBASIC2.72□□□□□ -1.97
CCSER1Q9C0I3 AC090888.2-201ENST00000559765 1144 ntBASIC2.72□□□□□ -1.97
CCSER1Q9C0I3 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC2.72□□□□□ -1.97
CCSER1Q9C0I3 MIR3616-201ENST00000584070 92 ntBASIC2.72□□□□□ -1.97
CCSER1Q9C0I3 HMGN2P15-201ENST00000585707 270 ntBASIC2.72□□□□□ -1.97
CCSER1Q9C0I3 UBE2L4-201ENST00000587688 464 ntBASIC2.72□□□□□ -1.97
CCSER1Q9C0I3 AC007038.2-201ENST00000608095 740 ntBASIC2.72□□□□□ -1.97
CCSER1Q9C0I3 AC024560.3-201ENST00000608482 349 ntBASIC2.72□□□□□ -1.97
CCSER1Q9C0I3 SNHG22-203ENST00000617833 660 ntBASIC2.72□□□□□ -1.97
CCSER1Q9C0I3 AL158801.5-201ENST00000623123 465 ntBASIC2.72□□□□□ -1.97
CCSER1Q9C0I3 MIR1291-201ENST00000627649 87 ntBASIC2.72□□□□□ -1.97
CCSER1Q9C0I3 MTND5P29-201ENST00000458676 1807 ntBASIC2.72□□□□□ -1.97
CCSER1Q9C0I3 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
CCSER1Q9C0I3 RNU4-82P-201ENST00000362443 140 ntBASIC2.71□□□□□ -1.98
CCSER1Q9C0I3 RNU6-884P-201ENST00000363889 107 ntBASIC2.71□□□□□ -1.98
CCSER1Q9C0I3 Y_RNA.245-201ENST00000364493 95 ntBASIC2.71□□□□□ -1.98
CCSER1Q9C0I3 SNORA68.1-201ENST00000364537 132 ntBASIC2.71□□□□□ -1.98
CCSER1Q9C0I3 RNU6-723P-201ENST00000383973 107 ntBASIC2.71□□□□□ -1.98
CCSER1Q9C0I3 RNA5SP181-201ENST00000410246 98 ntBASIC2.71□□□□□ -1.98
CCSER1Q9C0I3 AC096649.2-201ENST00000416186 393 ntBASIC2.71□□□□□ -1.98
CCSER1Q9C0I3 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC2.71□□□□□ -1.98
CCSER1Q9C0I3 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC2.71□□□□□ -1.98
CCSER1Q9C0I3 AC092447.3-201ENST00000426027 686 ntBASIC2.71□□□□□ -1.98
CCSER1Q9C0I3 RPS15AP5-201ENST00000436276 388 ntBASIC2.71□□□□□ -1.98
CCSER1Q9C0I3 RSU1P2-202ENST00000437884 485 ntBASIC2.71□□□□□ -1.98
CCSER1Q9C0I3 AC104389.3-201ENST00000445629 235 ntBASIC2.71□□□□□ -1.98
CCSER1Q9C0I3 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC2.71□□□□□ -1.98
CCSER1Q9C0I3 AP000852.1-201ENST00000472460 573 ntBASIC2.71□□□□□ -1.98
CCSER1Q9C0I3 MRPS36P2-201ENST00000512569 299 ntBASIC2.71□□□□□ -1.98
CCSER1Q9C0I3 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC2.71□□□□□ -1.98
CCSER1Q9C0I3 RNU6-1129P-201ENST00000515964 104 ntBASIC2.71□□□□□ -1.98
CCSER1Q9C0I3 AC026407.1-201ENST00000518369 204 ntBASIC2.71□□□□□ -1.98
CCSER1Q9C0I3 AP003467.2-201ENST00000520175 319 ntBASIC2.71□□□□□ -1.98
CCSER1Q9C0I3 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC2.71□□□□□ -1.98
CCSER1Q9C0I3 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
CCSER1Q9C0I3 GLYCAM1-201ENST00000546596 285 ntBASIC2.71□□□□□ -1.98
CCSER1Q9C0I3 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC2.71□□□□□ -1.98
CCSER1Q9C0I3 AL512310.1-201ENST00000548639 172 ntBASIC2.71□□□□□ -1.98
CCSER1Q9C0I3 MRPS36P5-201ENST00000551909 298 ntBASIC2.71□□□□□ -1.98
CCSER1Q9C0I3 AC136618.2-201ENST00000575091 400 ntBASIC2.71□□□□□ -1.98
CCSER1Q9C0I3 ISCA1P3-201ENST00000577104 373 ntBASIC2.71□□□□□ -1.98
CCSER1Q9C0I3 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC2.71□□□□□ -1.98
CCSER1Q9C0I3 AC068790.3-201ENST00000602988 553 ntBASIC2.71□□□□□ -1.98
CCSER1Q9C0I3 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC2.71□□□□□ -1.98
CCSER1Q9C0I3 CTSLP2-204ENST00000629029 392 ntBASIC2.71□□□□□ -1.98
CCSER1Q9C0I3 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
CCSER1Q9C0I3 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.71□□□□□ -1.98
CCSER1Q9C0I3 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.71□□□□□ -1.98
CCSER1Q9C0I3 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.7□□□□□ -1.98
CCSER1Q9C0I3 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
CCSER1Q9C0I3 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.7□□□□□ -1.98
CCSER1Q9C0I3 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.7□□□□□ -1.98
CCSER1Q9C0I3 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC2.7□□□□□ -1.98
CCSER1Q9C0I3 RN7SKP226-201ENST00000364912 300 ntBASIC2.7□□□□□ -1.98
CCSER1Q9C0I3 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
CCSER1Q9C0I3 RNU6-278P-201ENST00000390945 109 ntBASIC2.7□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 85.4 ms