Protein–RNA interactions for Protein: Q9BXA9

SALL3, Sal-like protein 3, humanhuman

Predictions only

Length 1,300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SALL3Q9BXA9 RNA5SP72-201ENST00000364442 117 ntBASIC4.03□□□□□ -1.76
SALL3Q9BXA9 SNORA32.2-201ENST00000384049 122 ntBASIC4.03□□□□□ -1.76
SALL3Q9BXA9 MIR514A2-201ENST00000385131 88 ntBASIC4.03□□□□□ -1.76
SALL3Q9BXA9 MIR514A3-201ENST00000385132 88 ntBASIC4.03□□□□□ -1.76
SALL3Q9BXA9 MIR454-201ENST00000390180 115 ntBASIC4.03□□□□□ -1.76
SALL3Q9BXA9 CD3D-202ENST00000392884 476 ntTSL 2 BASIC4.03□□□□□ -1.76
SALL3Q9BXA9 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
SALL3Q9BXA9 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC4.03□□□□□ -1.76
SALL3Q9BXA9 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC4.03□□□□□ -1.76
SALL3Q9BXA9 Z75741.1-201ENST00000446793 314 ntBASIC4.03□□□□□ -1.76
SALL3Q9BXA9 MTND3P16-201ENST00000452205 344 ntBASIC4.03□□□□□ -1.76
SALL3Q9BXA9 MTND1P9-201ENST00000453775 944 ntBASIC4.03□□□□□ -1.76
SALL3Q9BXA9 AL136126.1-201ENST00000473603 402 ntBASIC4.03□□□□□ -1.76
SALL3Q9BXA9 RNU4-49P-201ENST00000516080 140 ntBASIC4.03□□□□□ -1.76
SALL3Q9BXA9 RN7SKP116-201ENST00000516902 319 ntBASIC4.03□□□□□ -1.76
SALL3Q9BXA9 RNU4-60P-201ENST00000517239 135 ntBASIC4.03□□□□□ -1.76
SALL3Q9BXA9 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC4.03□□□□□ -1.76
SALL3Q9BXA9 AC020661.2-201ENST00000560114 134 ntBASIC4.03□□□□□ -1.76
SALL3Q9BXA9 MIR2682-201ENST00000580305 110 ntBASIC4.03□□□□□ -1.76
SALL3Q9BXA9 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC4.03□□□□□ -1.76
SALL3Q9BXA9 RNU6-89P-201ENST00000606519 100 ntBASIC4.03□□□□□ -1.76
SALL3Q9BXA9 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC4.03□□□□□ -1.76
SALL3Q9BXA9 AL133215.3-201ENST00000609801 448 ntBASIC4.03□□□□□ -1.76
SALL3Q9BXA9 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC4.03□□□□□ -1.76
SALL3Q9BXA9 AC073476.4-201ENST00000628409 72 ntBASIC4.03□□□□□ -1.76
SALL3Q9BXA9 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC4.03□□□□□ -1.76
SALL3Q9BXA9 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.03□□□□□ -1.76
SALL3Q9BXA9 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
SALL3Q9BXA9 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC4.03□□□□□ -1.76
SALL3Q9BXA9 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
SALL3Q9BXA9 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
SALL3Q9BXA9 TNPO1P3-201ENST00000436471 2662 ntBASIC4.03□□□□□ -1.76
SALL3Q9BXA9 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC4.03□□□□□ -1.76
SALL3Q9BXA9 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
SALL3Q9BXA9 AL138713.1-201ENST00000624026 2130 ntBASIC4.02□□□□□ -1.77
SALL3Q9BXA9 OR1S2-201ENST00000302592 978 ntBASIC4.02□□□□□ -1.77
SALL3Q9BXA9 AL139276.1-201ENST00000311910 1001 ntBASIC4.02□□□□□ -1.77
SALL3Q9BXA9 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC4.02□□□□□ -1.77
SALL3Q9BXA9 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
SALL3Q9BXA9 Y_RNA.231-201ENST00000364358 102 ntBASIC4.02□□□□□ -1.77
SALL3Q9BXA9 U3.11-201ENST00000364476 212 ntBASIC4.02□□□□□ -1.77
SALL3Q9BXA9 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC4.02□□□□□ -1.77
SALL3Q9BXA9 RNU6-738P-201ENST00000384531 106 ntBASIC4.02□□□□□ -1.77
SALL3Q9BXA9 HMGN1P24-201ENST00000412282 298 ntBASIC4.02□□□□□ -1.77
SALL3Q9BXA9 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC4.02□□□□□ -1.77
SALL3Q9BXA9 AC063979.1-201ENST00000415539 377 ntBASIC4.02□□□□□ -1.77
SALL3Q9BXA9 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC4.02□□□□□ -1.77
SALL3Q9BXA9 ATP6V0E1P4-201ENST00000427294 242 ntBASIC4.02□□□□□ -1.77
SALL3Q9BXA9 AC005300.1-201ENST00000428401 373 ntBASIC4.02□□□□□ -1.77
SALL3Q9BXA9 AC005019.1-201ENST00000436455 431 ntBASIC4.02□□□□□ -1.77
SALL3Q9BXA9 SNORD121B-201ENST00000458838 81 ntBASIC4.02□□□□□ -1.77
SALL3Q9BXA9 AL049714.1-201ENST00000466686 347 ntBASIC4.02□□□□□ -1.77
SALL3Q9BXA9 AC126389.1-201ENST00000477436 290 ntBASIC4.02□□□□□ -1.77
SALL3Q9BXA9 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC4.02□□□□□ -1.77
SALL3Q9BXA9 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
SALL3Q9BXA9 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC4.02□□□□□ -1.77
SALL3Q9BXA9 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC4.02□□□□□ -1.77
SALL3Q9BXA9 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC4.02□□□□□ -1.77
SALL3Q9BXA9 MIR4276-201ENST00000584832 70 ntBASIC4.02□□□□□ -1.77
SALL3Q9BXA9 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC4.02□□□□□ -1.77
SALL3Q9BXA9 IGKV1OR2-6-201ENST00000603485 277 ntBASIC4.02□□□□□ -1.77
SALL3Q9BXA9 AC012468.1-201ENST00000604888 430 ntBASIC4.02□□□□□ -1.77
SALL3Q9BXA9 AC245517.5-201ENST00000611529 162 ntBASIC4.02□□□□□ -1.77
SALL3Q9BXA9 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC4.02□□□□□ -1.77
SALL3Q9BXA9 MIR7975-201ENST00000619350 68 ntBASIC4.02□□□□□ -1.77
SALL3Q9BXA9 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC4.02□□□□□ -1.77
SALL3Q9BXA9 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC4.02□□□□□ -1.77
SALL3Q9BXA9 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
SALL3Q9BXA9 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
SALL3Q9BXA9 ASNSP3-201ENST00000451989 1306 ntBASIC4.02□□□□□ -1.77
SALL3Q9BXA9 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC4.02□□□□□ -1.77
SALL3Q9BXA9 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC4.02□□□□□ -1.77
SALL3Q9BXA9 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC4.02□□□□□ -1.77
SALL3Q9BXA9 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC4.02□□□□□ -1.77
SALL3Q9BXA9 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
SALL3Q9BXA9 HSPE1P11-201ENST00000339579 310 ntBASIC4.01□□□□□ -1.77
SALL3Q9BXA9 Y_RNA.184-201ENST00000363884 108 ntBASIC4.01□□□□□ -1.77
SALL3Q9BXA9 RNU5A-8P-201ENST00000364102 114 ntBASIC4.01□□□□□ -1.77
SALL3Q9BXA9 RNY3P13-201ENST00000365542 102 ntBASIC4.01□□□□□ -1.77
SALL3Q9BXA9 IARS-201ENST00000375627 697 ntTSL 3 BASIC4.01□□□□□ -1.77
SALL3Q9BXA9 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC4.01□□□□□ -1.77
SALL3Q9BXA9 MIR558-201ENST00000384920 94 ntBASIC4.01□□□□□ -1.77
SALL3Q9BXA9 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
SALL3Q9BXA9 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
SALL3Q9BXA9 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC4.01□□□□□ -1.77
SALL3Q9BXA9 AC017083.1-201ENST00000428093 483 ntBASIC4.01□□□□□ -1.77
SALL3Q9BXA9 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC4.01□□□□□ -1.77
SALL3Q9BXA9 GTF2IP13-201ENST00000438487 386 ntBASIC4.01□□□□□ -1.77
SALL3Q9BXA9 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC4.01□□□□□ -1.77
SALL3Q9BXA9 AC104308.1-201ENST00000454621 333 ntBASIC4.01□□□□□ -1.77
SALL3Q9BXA9 AC108059.3-201ENST00000456388 214 ntBASIC4.01□□□□□ -1.77
SALL3Q9BXA9 SNORD19B-201ENST00000459623 84 ntBASIC4.01□□□□□ -1.77
SALL3Q9BXA9 AP000873.1-201ENST00000463987 400 ntBASIC4.01□□□□□ -1.77
SALL3Q9BXA9 AC006512.1-201ENST00000468816 291 ntBASIC4.01□□□□□ -1.77
SALL3Q9BXA9 RPL23AP11-201ENST00000475260 469 ntBASIC4.01□□□□□ -1.77
SALL3Q9BXA9 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC4.01□□□□□ -1.77
SALL3Q9BXA9 RNU4-29P-201ENST00000515943 174 ntBASIC4.01□□□□□ -1.77
SALL3Q9BXA9 RNU4ATAC10P-201ENST00000516967 122 ntBASIC4.01□□□□□ -1.77
SALL3Q9BXA9 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC4.01□□□□□ -1.77
SALL3Q9BXA9 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC4.01□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 99 ms