Protein–RNA interactions for Protein: Q9BSE4

HERPUD2, Homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 2 protein, humanhuman

Predictions only

Length 406 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2Q9BSE4 GTF2IP20-201ENST00000431663 360 ntBASIC3.54□□□□□ -1.84
HERPUD2Q9BSE4 RPL21P23-201ENST00000446654 460 ntBASIC3.54□□□□□ -1.84
HERPUD2Q9BSE4 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC3.54□□□□□ -1.84
HERPUD2Q9BSE4 AC132479.1-201ENST00000449160 144 ntBASIC3.54□□□□□ -1.84
HERPUD2Q9BSE4 RPS15AP27-201ENST00000449183 343 ntBASIC3.54□□□□□ -1.84
HERPUD2Q9BSE4 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC3.54□□□□□ -1.84
HERPUD2Q9BSE4 CENPBD1P1-201ENST00000464061 469 ntBASIC3.54□□□□□ -1.84
HERPUD2Q9BSE4 AC025518.1-201ENST00000479856 347 ntBASIC3.54□□□□□ -1.84
HERPUD2Q9BSE4 AC026801.1-201ENST00000497178 464 ntBASIC3.54□□□□□ -1.84
HERPUD2Q9BSE4 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC3.54□□□□□ -1.84
HERPUD2Q9BSE4 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC3.54□□□□□ -1.84
HERPUD2Q9BSE4 RNU6-703P-201ENST00000516946 107 ntBASIC3.54□□□□□ -1.84
HERPUD2Q9BSE4 SCARNA20.6-201ENST00000517251 106 ntBASIC3.54□□□□□ -1.84
HERPUD2Q9BSE4 AL157871.3-201ENST00000557231 293 ntBASIC3.54□□□□□ -1.84
HERPUD2Q9BSE4 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC3.54□□□□□ -1.84
HERPUD2Q9BSE4 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC3.54□□□□□ -1.84
HERPUD2Q9BSE4 MTND1P15-201ENST00000579262 949 ntBASIC3.54□□□□□ -1.84
HERPUD2Q9BSE4 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC3.54□□□□□ -1.84
HERPUD2Q9BSE4 AC087683.1-201ENST00000591187 441 ntBASIC3.54□□□□□ -1.84
HERPUD2Q9BSE4 RPL23AP78-201ENST00000599928 470 ntBASIC3.54□□□□□ -1.84
HERPUD2Q9BSE4 AC025165.5-201ENST00000602802 578 ntBASIC3.54□□□□□ -1.84
HERPUD2Q9BSE4 AL670379.4-201ENST00000605279 254 ntBASIC3.54□□□□□ -1.84
HERPUD2Q9BSE4 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC3.54□□□□□ -1.84
HERPUD2Q9BSE4 AC084757.4-201ENST00000616350 526 ntBASIC3.54□□□□□ -1.84
HERPUD2Q9BSE4 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC3.54□□□□□ -1.84
HERPUD2Q9BSE4 AL356274.2-201ENST00000624379 3752 ntBASIC3.54□□□□□ -1.84
HERPUD2Q9BSE4 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
HERPUD2Q9BSE4 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.54□□□□□ -1.84
HERPUD2Q9BSE4 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.54□□□□□ -1.84
HERPUD2Q9BSE4 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
HERPUD2Q9BSE4 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
HERPUD2Q9BSE4 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.54□□□□□ -1.84
HERPUD2Q9BSE4 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.53□□□□□ -1.84
HERPUD2Q9BSE4 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.53□□□□□ -1.84
HERPUD2Q9BSE4 Y_RNA.33-201ENST00000362591 102 ntBASIC3.53□□□□□ -1.84
HERPUD2Q9BSE4 RNU6-395P-201ENST00000365662 106 ntBASIC3.53□□□□□ -1.84
HERPUD2Q9BSE4 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC3.53□□□□□ -1.84
HERPUD2Q9BSE4 RNU6-74P-201ENST00000384235 107 ntBASIC3.53□□□□□ -1.84
HERPUD2Q9BSE4 Y_RNA.582-201ENST00000391023 95 ntBASIC3.53□□□□□ -1.84
HERPUD2Q9BSE4 RNA5SP44-201ENST00000410446 133 ntBASIC3.53□□□□□ -1.84
HERPUD2Q9BSE4 RNU6-1025P-201ENST00000410629 104 ntBASIC3.53□□□□□ -1.84
HERPUD2Q9BSE4 AC063979.1-201ENST00000415539 377 ntBASIC3.53□□□□□ -1.84
HERPUD2Q9BSE4 AL356968.1-201ENST00000416622 474 ntBASIC3.53□□□□□ -1.84
HERPUD2Q9BSE4 AC016907.1-201ENST00000419483 435 ntBASIC3.53□□□□□ -1.84
HERPUD2Q9BSE4 CALM2P2-201ENST00000428512 440 ntBASIC3.53□□□□□ -1.84
HERPUD2Q9BSE4 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC3.53□□□□□ -1.84
HERPUD2Q9BSE4 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC3.53□□□□□ -1.84
HERPUD2Q9BSE4 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC3.53□□□□□ -1.84
HERPUD2Q9BSE4 AC098831.1-201ENST00000440661 216 ntBASIC3.53□□□□□ -1.84
HERPUD2Q9BSE4 BRK1P2-201ENST00000442875 223 ntBASIC3.53□□□□□ -1.84
HERPUD2Q9BSE4 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC3.53□□□□□ -1.84
HERPUD2Q9BSE4 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC3.53□□□□□ -1.84
HERPUD2Q9BSE4 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC3.53□□□□□ -1.84
HERPUD2Q9BSE4 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC3.53□□□□□ -1.84
HERPUD2Q9BSE4 AC079382.1-201ENST00000493346 557 ntBASIC3.53□□□□□ -1.84
HERPUD2Q9BSE4 AL358832.1-201ENST00000497800 389 ntBASIC3.53□□□□□ -1.84
HERPUD2Q9BSE4 HSPD1P15-201ENST00000505573 1122 ntBASIC3.53□□□□□ -1.84
HERPUD2Q9BSE4 RNU6-405P-201ENST00000516637 110 ntBASIC3.53□□□□□ -1.84
HERPUD2Q9BSE4 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.53□□□□□ -1.84
HERPUD2Q9BSE4 AC025755.1-201ENST00000521306 278 ntBASIC3.53□□□□□ -1.84
HERPUD2Q9BSE4 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC3.53□□□□□ -1.84
HERPUD2Q9BSE4 MIR4782-201ENST00000577987 79 ntBASIC3.53□□□□□ -1.84
HERPUD2Q9BSE4 MIR3922-201ENST00000585192 84 ntBASIC3.53□□□□□ -1.84
HERPUD2Q9BSE4 BNIP3P22-201ENST00000593399 556 ntBASIC3.53□□□□□ -1.84
HERPUD2Q9BSE4 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3.53□□□□□ -1.84
HERPUD2Q9BSE4 AC091805.2-201ENST00000603848 235 ntBASIC3.53□□□□□ -1.84
HERPUD2Q9BSE4 AC002064.3-201ENST00000623448 346 ntBASIC3.53□□□□□ -1.84
HERPUD2Q9BSE4 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.53□□□□□ -1.84
HERPUD2Q9BSE4 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
HERPUD2Q9BSE4 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
HERPUD2Q9BSE4 ADAM3A-203ENST00000461344 2157 ntBASIC3.53□□□□□ -1.84
HERPUD2Q9BSE4 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
HERPUD2Q9BSE4 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.53□□□□□ -1.84
HERPUD2Q9BSE4 AC007496.3-201ENST00000624987 3443 ntBASIC3.53□□□□□ -1.85
HERPUD2Q9BSE4 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.53□□□□□ -1.85
HERPUD2Q9BSE4 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
HERPUD2Q9BSE4 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
HERPUD2Q9BSE4 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.52□□□□□ -1.85
HERPUD2Q9BSE4 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC3.52□□□□□ -1.85
HERPUD2Q9BSE4 RNU1-70P-201ENST00000362618 164 ntBASIC3.52□□□□□ -1.85
HERPUD2Q9BSE4 SNORA62.1-201ENST00000364287 154 ntBASIC3.52□□□□□ -1.85
HERPUD2Q9BSE4 Y_RNA.559-201ENST00000384686 107 ntBASIC3.52□□□□□ -1.85
HERPUD2Q9BSE4 MIR454-201ENST00000390180 115 ntBASIC3.52□□□□□ -1.85
HERPUD2Q9BSE4 GSTA9P-201ENST00000406231 611 ntBASIC3.52□□□□□ -1.85
HERPUD2Q9BSE4 MIR1289-1-201ENST00000408836 144 ntBASIC3.52□□□□□ -1.85
HERPUD2Q9BSE4 RNU2-49P-201ENST00000410666 184 ntBASIC3.52□□□□□ -1.85
HERPUD2Q9BSE4 AL353678.1-201ENST00000422735 741 ntBASIC3.52□□□□□ -1.85
HERPUD2Q9BSE4 AL160275.3-201ENST00000423876 471 ntBASIC3.52□□□□□ -1.85
HERPUD2Q9BSE4 AC098614.2-201ENST00000426040 255 ntBASIC3.52□□□□□ -1.85
HERPUD2Q9BSE4 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC3.52□□□□□ -1.85
HERPUD2Q9BSE4 MTCO2P11-201ENST00000431069 680 ntBASIC3.52□□□□□ -1.85
HERPUD2Q9BSE4 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC3.52□□□□□ -1.85
HERPUD2Q9BSE4 RPL23AP58-201ENST00000440453 469 ntBASIC3.52□□□□□ -1.85
HERPUD2Q9BSE4 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC3.52□□□□□ -1.85
HERPUD2Q9BSE4 WASF1P1-201ENST00000447560 1131 ntBASIC3.52□□□□□ -1.85
HERPUD2Q9BSE4 RBMY2UP-201ENST00000453474 324 ntBASIC3.52□□□□□ -1.85
HERPUD2Q9BSE4 RNU7-182P-201ENST00000459009 62 ntBASIC3.52□□□□□ -1.85
HERPUD2Q9BSE4 RN7SL601P-201ENST00000471221 293 ntBASIC3.52□□□□□ -1.85
HERPUD2Q9BSE4 RN7SL442P-201ENST00000473804 320 ntBASIC3.52□□□□□ -1.85
HERPUD2Q9BSE4 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC3.52□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 117.9 ms