Protein–RNA interactions for Protein: Q9BRP4

PAAF1, Proteasomal ATPase-associated factor 1, humanhuman

Predictions only

Length 392 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1Q9BRP4 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC3.58□□□□□ -1.84
PAAF1Q9BRP4 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC3.58□□□□□ -1.84
PAAF1Q9BRP4 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC3.58□□□□□ -1.84
PAAF1Q9BRP4 SNRPFP3-201ENST00000457792 225 ntBASIC3.58□□□□□ -1.84
PAAF1Q9BRP4 RPS29P2-201ENST00000479278 136 ntBASIC3.58□□□□□ -1.84
PAAF1Q9BRP4 FCF1P3-201ENST00000496394 590 ntBASIC3.58□□□□□ -1.84
PAAF1Q9BRP4 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC3.58□□□□□ -1.84
PAAF1Q9BRP4 PCBP2P3-201ENST00000509726 843 ntBASIC3.58□□□□□ -1.84
PAAF1Q9BRP4 RNU6-927P-201ENST00000516199 100 ntBASIC3.58□□□□□ -1.84
PAAF1Q9BRP4 RNA5SP309-201ENST00000516670 106 ntBASIC3.58□□□□□ -1.84
PAAF1Q9BRP4 RNA5SP291-201ENST00000517222 105 ntBASIC3.58□□□□□ -1.84
PAAF1Q9BRP4 NARSP2-201ENST00000518524 679 ntBASIC3.58□□□□□ -1.84
PAAF1Q9BRP4 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC3.58□□□□□ -1.84
PAAF1Q9BRP4 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC3.58□□□□□ -1.84
PAAF1Q9BRP4 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC3.58□□□□□ -1.84
PAAF1Q9BRP4 MIR4703-201ENST00000577728 79 ntBASIC3.58□□□□□ -1.84
PAAF1Q9BRP4 AL020991.1-201ENST00000612314 373 ntBASIC3.58□□□□□ -1.84
PAAF1Q9BRP4 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.58□□□□□ -1.84
PAAF1Q9BRP4 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
PAAF1Q9BRP4 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC3.58□□□□□ -1.84
PAAF1Q9BRP4 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
PAAF1Q9BRP4 RNY3P3-201ENST00000363816 102 ntBASIC3.57□□□□□ -1.84
PAAF1Q9BRP4 RNU6-116P-201ENST00000384042 109 ntBASIC3.57□□□□□ -1.84
PAAF1Q9BRP4 U3.19-201ENST00000390893 196 ntBASIC3.57□□□□□ -1.84
PAAF1Q9BRP4 AL606923.1-201ENST00000406616 190 ntBASIC3.57□□□□□ -1.84
PAAF1Q9BRP4 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC3.57□□□□□ -1.84
PAAF1Q9BRP4 RNU2-37P-201ENST00000410695 177 ntBASIC3.57□□□□□ -1.84
PAAF1Q9BRP4 OR9R1P-201ENST00000412200 877 ntBASIC3.57□□□□□ -1.84
PAAF1Q9BRP4 OR6C66P-201ENST00000414917 930 ntBASIC3.57□□□□□ -1.84
PAAF1Q9BRP4 RAC1P3-201ENST00000416129 580 ntBASIC3.57□□□□□ -1.84
PAAF1Q9BRP4 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC3.57□□□□□ -1.84
PAAF1Q9BRP4 AL109913.1-201ENST00000421173 514 ntBASIC3.57□□□□□ -1.84
PAAF1Q9BRP4 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC3.57□□□□□ -1.84
PAAF1Q9BRP4 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC3.57□□□□□ -1.84
PAAF1Q9BRP4 TNPO1P3-201ENST00000436471 2662 ntBASIC3.57□□□□□ -1.84
PAAF1Q9BRP4 CALM1P1-201ENST00000442082 433 ntBASIC3.57□□□□□ -1.84
PAAF1Q9BRP4 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC3.57□□□□□ -1.84
PAAF1Q9BRP4 AL671855.1-201ENST00000446875 1203 ntBASIC3.57□□□□□ -1.84
PAAF1Q9BRP4 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC3.57□□□□□ -1.84
PAAF1Q9BRP4 AC073415.1-201ENST00000449240 153 ntBASIC3.57□□□□□ -1.84
PAAF1Q9BRP4 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC3.57□□□□□ -1.84
PAAF1Q9BRP4 RPS23P3-201ENST00000470993 430 ntBASIC3.57□□□□□ -1.84
PAAF1Q9BRP4 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
PAAF1Q9BRP4 AC069439.1-201ENST00000494739 167 ntBASIC3.57□□□□□ -1.84
PAAF1Q9BRP4 AC092436.1-201ENST00000506450 503 ntBASIC3.57□□□□□ -1.84
PAAF1Q9BRP4 RBBP4P6-201ENST00000508098 202 ntBASIC3.57□□□□□ -1.84
PAAF1Q9BRP4 RN7SKP219-201ENST00000516825 296 ntBASIC3.57□□□□□ -1.84
PAAF1Q9BRP4 SNORD60.2-201ENST00000516883 86 ntBASIC3.57□□□□□ -1.84
PAAF1Q9BRP4 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
PAAF1Q9BRP4 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC3.57□□□□□ -1.84
PAAF1Q9BRP4 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC3.57□□□□□ -1.84
PAAF1Q9BRP4 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.57□□□□□ -1.84
PAAF1Q9BRP4 MIR4738-201ENST00000579134 87 ntBASIC3.57□□□□□ -1.84
PAAF1Q9BRP4 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC3.57□□□□□ -1.84
PAAF1Q9BRP4 RDM1-219ENST00000615378 542 ntTSL 3 BASIC3.57□□□□□ -1.84
PAAF1Q9BRP4 RMST_9.1-201ENST00000619945 193 ntBASIC3.57□□□□□ -1.84
PAAF1Q9BRP4 AC009033.1-201ENST00000624279 431 ntBASIC3.57□□□□□ -1.84
PAAF1Q9BRP4 MTND5P42-201ENST00000637720 498 ntBASIC3.57□□□□□ -1.84
PAAF1Q9BRP4 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
PAAF1Q9BRP4 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.57□□□□□ -1.84
PAAF1Q9BRP4 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
PAAF1Q9BRP4 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3.56□□□□□ -1.84
PAAF1Q9BRP4 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.56□□□□□ -1.84
PAAF1Q9BRP4 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
PAAF1Q9BRP4 UBE2L2-201ENST00000254302 429 ntBASIC3.56□□□□□ -1.84
PAAF1Q9BRP4 RNU6-552P-201ENST00000362869 119 ntBASIC3.56□□□□□ -1.84
PAAF1Q9BRP4 RNU6-14P-201ENST00000384630 106 ntBASIC3.56□□□□□ -1.84
PAAF1Q9BRP4 RNU6-876P-201ENST00000391295 104 ntBASIC3.56□□□□□ -1.84
PAAF1Q9BRP4 CD3D-202ENST00000392884 476 ntTSL 2 BASIC3.56□□□□□ -1.84
PAAF1Q9BRP4 HSPE1P26-201ENST00000405341 275 ntBASIC3.56□□□□□ -1.84
PAAF1Q9BRP4 AC092809.3-201ENST00000415453 231 ntBASIC3.56□□□□□ -1.84
PAAF1Q9BRP4 SNRPEP10-201ENST00000420249 274 ntBASIC3.56□□□□□ -1.84
PAAF1Q9BRP4 NDUFB4P7-201ENST00000423198 363 ntBASIC3.56□□□□□ -1.84
PAAF1Q9BRP4 HMGB1P31-201ENST00000437242 427 ntBASIC3.56□□□□□ -1.84
PAAF1Q9BRP4 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3.56□□□□□ -1.84
PAAF1Q9BRP4 CBWD4P-201ENST00000445695 655 ntBASIC3.56□□□□□ -1.84
PAAF1Q9BRP4 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC3.56□□□□□ -1.84
PAAF1Q9BRP4 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC3.56□□□□□ -1.84
PAAF1Q9BRP4 RPL21P8-201ENST00000465083 535 ntBASIC3.56□□□□□ -1.84
PAAF1Q9BRP4 TRBV1-201ENST00000476502 284 ntBASIC3.56□□□□□ -1.84
PAAF1Q9BRP4 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC3.56□□□□□ -1.84
PAAF1Q9BRP4 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
PAAF1Q9BRP4 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.56□□□□□ -1.84
PAAF1Q9BRP4 RNU6-143P-201ENST00000516942 93 ntBASIC3.56□□□□□ -1.84
PAAF1Q9BRP4 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC3.56□□□□□ -1.84
PAAF1Q9BRP4 AC134698.4-201ENST00000523451 826 ntBASIC3.56□□□□□ -1.84
PAAF1Q9BRP4 ATP5F1P5-201ENST00000526403 760 ntBASIC3.56□□□□□ -1.84
PAAF1Q9BRP4 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC3.56□□□□□ -1.84
PAAF1Q9BRP4 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC3.56□□□□□ -1.84
PAAF1Q9BRP4 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC3.56□□□□□ -1.84
PAAF1Q9BRP4 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC3.56□□□□□ -1.84
PAAF1Q9BRP4 AL138889.2-201ENST00000603883 242 ntBASIC3.56□□□□□ -1.84
PAAF1Q9BRP4 AC022893.3-201ENST00000607665 437 ntBASIC3.56□□□□□ -1.84
PAAF1Q9BRP4 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC3.56□□□□□ -1.84
PAAF1Q9BRP4 AC034102.8-201ENST00000615146 484 ntBASIC3.56□□□□□ -1.84
PAAF1Q9BRP4 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC3.56□□□□□ -1.84
PAAF1Q9BRP4 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC3.56□□□□□ -1.84
PAAF1Q9BRP4 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
PAAF1Q9BRP4 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC3.56□□□□□ -1.84
PAAF1Q9BRP4 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 132.9 ms