Protein–RNA interactions for Protein: Q99958

FOXC2, Forkhead box protein C2, humanhuman

Predictions only

Length 501 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXC2Q99958 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC2.17□□□□□ -2.06
FOXC2Q99958 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC2.17□□□□□ -2.06
FOXC2Q99958 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC2.17□□□□□ -2.06
FOXC2Q99958 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC2.17□□□□□ -2.06
FOXC2Q99958 AL133271.1-201ENST00000538229 291 ntBASIC2.17□□□□□ -2.06
FOXC2Q99958 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
FOXC2Q99958 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC2.17□□□□□ -2.06
FOXC2Q99958 MIR3616-201ENST00000584070 92 ntBASIC2.17□□□□□ -2.06
FOXC2Q99958 AL391001.1-201ENST00000602747 715 ntBASIC2.17□□□□□ -2.06
FOXC2Q99958 AC034229.4-201ENST00000607861 441 ntBASIC2.17□□□□□ -2.06
FOXC2Q99958 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC2.17□□□□□ -2.06
FOXC2Q99958 AL139418.1-201ENST00000613613 177 ntBASIC2.17□□□□□ -2.06
FOXC2Q99958 AC008993.2-201ENST00000631744 806 ntBASIC2.17□□□□□ -2.06
FOXC2Q99958 HSPA8P4-201ENST00000511877 1920 ntBASIC2.17□□□□□ -2.06
FOXC2Q99958 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC2.17□□□□□ -2.06
FOXC2Q99958 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
FOXC2Q99958 AC009902.3-201ENST00000606235 2172 ntBASIC2.16□□□□□ -2.06
FOXC2Q99958 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.16□□□□□ -2.06
FOXC2Q99958 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC2.16□□□□□ -2.06
FOXC2Q99958 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC2.16□□□□□ -2.06
FOXC2Q99958 RNU6-931P-201ENST00000363850 107 ntBASIC2.16□□□□□ -2.06
FOXC2Q99958 RNU6-289P-201ENST00000364093 107 ntBASIC2.16□□□□□ -2.06
FOXC2Q99958 MTND4P13-201ENST00000402078 1023 ntBASIC2.16□□□□□ -2.06
FOXC2Q99958 AL590004.2-201ENST00000404787 371 ntBASIC2.16□□□□□ -2.06
FOXC2Q99958 XKRYP1-201ENST00000423438 492 ntBASIC2.16□□□□□ -2.06
FOXC2Q99958 XKRYP2-201ENST00000432915 492 ntBASIC2.16□□□□□ -2.06
FOXC2Q99958 RPS15AP5-201ENST00000436276 388 ntBASIC2.16□□□□□ -2.06
FOXC2Q99958 RPS12P2-201ENST00000439728 269 ntBASIC2.16□□□□□ -2.06
FOXC2Q99958 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
FOXC2Q99958 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.16□□□□□ -2.06
FOXC2Q99958 AL606662.1-201ENST00000445763 553 ntBASIC2.16□□□□□ -2.06
FOXC2Q99958 EEF1E1P1-201ENST00000446998 430 ntBASIC2.16□□□□□ -2.06
FOXC2Q99958 RPL26P9-201ENST00000457466 433 ntBASIC2.16□□□□□ -2.06
FOXC2Q99958 AC003982.1-202ENST00000469928 248 ntBASIC2.16□□□□□ -2.06
FOXC2Q99958 RPL9P33-201ENST00000484311 566 ntBASIC2.16□□□□□ -2.06
FOXC2Q99958 RPS29P20-201ENST00000489592 171 ntBASIC2.16□□□□□ -2.06
FOXC2Q99958 RPS15AP36-201ENST00000492022 382 ntBASIC2.16□□□□□ -2.06
FOXC2Q99958 AC034244.1-201ENST00000507687 207 ntBASIC2.16□□□□□ -2.06
FOXC2Q99958 HSPE1P23-201ENST00000509838 286 ntBASIC2.16□□□□□ -2.06
FOXC2Q99958 RNA5SP471-201ENST00000516971 106 ntBASIC2.16□□□□□ -2.06
FOXC2Q99958 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC2.16□□□□□ -2.06
FOXC2Q99958 AC243972.3-201ENST00000539655 198 ntBASIC2.16□□□□□ -2.06
FOXC2Q99958 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC2.16□□□□□ -2.06
FOXC2Q99958 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC2.16□□□□□ -2.06
FOXC2Q99958 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC2.16□□□□□ -2.06
FOXC2Q99958 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC2.16□□□□□ -2.06
FOXC2Q99958 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.16□□□□□ -2.06
FOXC2Q99958 MIR3605-201ENST00000583214 100 ntBASIC2.16□□□□□ -2.06
FOXC2Q99958 ABBA01006766.1-201ENST00000584728 294 ntBASIC2.16□□□□□ -2.06
FOXC2Q99958 AF038458.1-201ENST00000588406 262 ntBASIC2.16□□□□□ -2.06
FOXC2Q99958 VN1R82P-201ENST00000601481 356 ntBASIC2.16□□□□□ -2.06
FOXC2Q99958 AC013244.3-201ENST00000605614 388 ntBASIC2.16□□□□□ -2.06
FOXC2Q99958 AC006270.3-201ENST00000605967 1036 ntBASIC2.16□□□□□ -2.06
FOXC2Q99958 AC135507.1-201ENST00000607214 561 ntBASIC2.16□□□□□ -2.06
FOXC2Q99958 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
FOXC2Q99958 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC2.15□□□□□ -2.06
FOXC2Q99958 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.15□□□□□ -2.06
FOXC2Q99958 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.15□□□□□ -2.06
FOXC2Q99958 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
FOXC2Q99958 AL391994.1-201ENST00000254724 282 ntBASIC2.15□□□□□ -2.07
FOXC2Q99958 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
FOXC2Q99958 RNU6-1072P-201ENST00000384703 107 ntBASIC2.15□□□□□ -2.07
FOXC2Q99958 RNU6-443P-201ENST00000384780 107 ntBASIC2.15□□□□□ -2.07
FOXC2Q99958 MIR518C-201ENST00000384822 101 ntBASIC2.15□□□□□ -2.07
FOXC2Q99958 RNU6-750P-201ENST00000390946 107 ntBASIC2.15□□□□□ -2.07
FOXC2Q99958 HMGN2P35-201ENST00000412164 270 ntBASIC2.15□□□□□ -2.07
FOXC2Q99958 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.15□□□□□ -2.07
FOXC2Q99958 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC2.15□□□□□ -2.07
FOXC2Q99958 UBE2FP1-201ENST00000416536 447 ntBASIC2.15□□□□□ -2.07
FOXC2Q99958 ACTR3BP6-201ENST00000422332 1241 ntBASIC2.15□□□□□ -2.07
FOXC2Q99958 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
FOXC2Q99958 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.15□□□□□ -2.07
FOXC2Q99958 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC2.15□□□□□ -2.07
FOXC2Q99958 RPL36AP6-201ENST00000435770 321 ntBASIC2.15□□□□□ -2.07
FOXC2Q99958 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC2.15□□□□□ -2.07
FOXC2Q99958 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC2.15□□□□□ -2.07
FOXC2Q99958 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC2.15□□□□□ -2.07
FOXC2Q99958 MTCO1P27-201ENST00000448269 226 ntBASIC2.15□□□□□ -2.07
FOXC2Q99958 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
FOXC2Q99958 CKS1BP2-201ENST00000497342 240 ntBASIC2.15□□□□□ -2.07
FOXC2Q99958 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC2.15□□□□□ -2.07
FOXC2Q99958 MEPE-206ENST00000511670 550 ntTSL 4 BASIC2.15□□□□□ -2.07
FOXC2Q99958 RNU6ATAC13P-201ENST00000516152 131 ntBASIC2.15□□□□□ -2.07
FOXC2Q99958 SCARNA17.1-201ENST00000516211 143 ntBASIC2.15□□□□□ -2.07
FOXC2Q99958 SCARNA17.2-201ENST00000516334 143 ntBASIC2.15□□□□□ -2.07
FOXC2Q99958 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC2.15□□□□□ -2.07
FOXC2Q99958 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.15□□□□□ -2.07
FOXC2Q99958 OR11H5P-201ENST00000554039 926 ntBASIC2.15□□□□□ -2.07
FOXC2Q99958 AL359212.1-201ENST00000556608 614 ntBASIC2.15□□□□□ -2.07
FOXC2Q99958 AC136618.2-201ENST00000575091 400 ntBASIC2.15□□□□□ -2.07
FOXC2Q99958 NRBF2P1-201ENST00000587407 859 ntBASIC2.15□□□□□ -2.07
FOXC2Q99958 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC2.15□□□□□ -2.07
FOXC2Q99958 TPMTP1-201ENST00000592307 737 ntBASIC2.15□□□□□ -2.07
FOXC2Q99958 AC234772.3-201ENST00000602277 528 ntBASIC2.15□□□□□ -2.07
FOXC2Q99958 AL356280.1-201ENST00000603614 379 ntBASIC2.15□□□□□ -2.07
FOXC2Q99958 AL596327.1-201ENST00000603629 213 ntBASIC2.15□□□□□ -2.07
FOXC2Q99958 AL158042.1-201ENST00000605338 460 ntBASIC2.15□□□□□ -2.07
FOXC2Q99958 AC013562.2-201ENST00000611632 603 ntBASIC2.15□□□□□ -2.07
FOXC2Q99958 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC2.15□□□□□ -2.07
FOXC2Q99958 SCARNA17.4-201ENST00000614296 143 ntBASIC2.15□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 103.3 ms