Protein–RNA interactions for Protein: Q99626

CDX2, Homeobox protein CDX-2, humanhuman

Predicted RBP Predictions only

Length 313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX2Q99626 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
CDX2Q99626 AL049838.1-201ENST00000563647 981 ntBASIC2.18□□□□□ -2.06
CDX2Q99626 MIR3199-1-201ENST00000582434 88 ntBASIC2.18□□□□□ -2.06
CDX2Q99626 MIR3670-2-201ENST00000582974 65 ntBASIC2.18□□□□□ -2.06
CDX2Q99626 MIR3670-1-201ENST00000584160 65 ntBASIC2.18□□□□□ -2.06
CDX2Q99626 MIR3670-3-201ENST00000584855 65 ntBASIC2.18□□□□□ -2.06
CDX2Q99626 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC2.18□□□□□ -2.06
CDX2Q99626 AP001429.1-201ENST00000602568 530 ntBASIC2.18□□□□□ -2.06
CDX2Q99626 MTND3P19-201ENST00000603825 345 ntBASIC2.18□□□□□ -2.06
CDX2Q99626 AL160237.3-201ENST00000604114 1013 ntBASIC2.18□□□□□ -2.06
CDX2Q99626 AP000787.2-201ENST00000604432 568 ntBASIC2.18□□□□□ -2.06
CDX2Q99626 AL049779.4-201ENST00000604500 156 ntBASIC2.18□□□□□ -2.06
CDX2Q99626 MIR3670-4-201ENST00000612260 65 ntBASIC2.18□□□□□ -2.06
CDX2Q99626 AC008147.4-201ENST00000617570 1204 ntBASIC2.18□□□□□ -2.06
CDX2Q99626 AC023510.2-201ENST00000622162 746 ntBASIC2.18□□□□□ -2.06
CDX2Q99626 AC090772.4-201ENST00000623599 362 ntBASIC2.18□□□□□ -2.06
CDX2Q99626 SDAD1P2-201ENST00000441308 2028 ntBASIC2.18□□□□□ -2.06
CDX2Q99626 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
CDX2Q99626 AC093536.2-201ENST00000565257 1406 ntBASIC2.17□□□□□ -2.06
CDX2Q99626 RNY1-201ENST00000364228 113 ntBASIC2.17□□□□□ -2.06
CDX2Q99626 SNORD116.1-201ENST00000365628 92 ntBASIC2.17□□□□□ -2.06
CDX2Q99626 OR5H15-201ENST00000383696 930 ntBASIC2.17□□□□□ -2.06
CDX2Q99626 RNU6-413P-201ENST00000384115 107 ntBASIC2.17□□□□□ -2.06
CDX2Q99626 MIR1290-201ENST00000408735 78 ntBASIC2.17□□□□□ -2.06
CDX2Q99626 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC2.17□□□□□ -2.06
CDX2Q99626 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC2.17□□□□□ -2.06
CDX2Q99626 THAP5P1-201ENST00000439089 262 ntBASIC2.17□□□□□ -2.06
CDX2Q99626 MTND5P14-201ENST00000441481 1267 ntBASIC2.17□□□□□ -2.06
CDX2Q99626 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC2.17□□□□□ -2.06
CDX2Q99626 AL121871.1-201ENST00000443413 436 ntBASIC2.17□□□□□ -2.06
CDX2Q99626 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC2.17□□□□□ -2.06
CDX2Q99626 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC2.17□□□□□ -2.06
CDX2Q99626 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC2.17□□□□□ -2.06
CDX2Q99626 SNRPGP6-201ENST00000451124 220 ntBASIC2.17□□□□□ -2.06
CDX2Q99626 AP000705.1-201ENST00000454567 350 ntBASIC2.17□□□□□ -2.06
CDX2Q99626 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
CDX2Q99626 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC2.17□□□□□ -2.06
CDX2Q99626 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC2.17□□□□□ -2.06
CDX2Q99626 TPT1P8-201ENST00000510120 555 ntBASIC2.17□□□□□ -2.06
CDX2Q99626 MTATP6P9-201ENST00000515039 680 ntBASIC2.17□□□□□ -2.06
CDX2Q99626 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
CDX2Q99626 DNAJC19P9-201ENST00000555084 351 ntBASIC2.17□□□□□ -2.06
CDX2Q99626 HMGB1P14-201ENST00000557424 591 ntBASIC2.17□□□□□ -2.06
CDX2Q99626 AC103810.1-201ENST00000579873 453 ntBASIC2.17□□□□□ -2.06
CDX2Q99626 MIR3609-201ENST00000582661 80 ntBASIC2.17□□□□□ -2.06
CDX2Q99626 BX664608.1-201ENST00000610519 487 ntBASIC2.17□□□□□ -2.06
CDX2Q99626 AL590099.1-201ENST00000615276 138 ntBASIC2.17□□□□□ -2.06
CDX2Q99626 RMST_2.1-201ENST00000617263 136 ntBASIC2.17□□□□□ -2.06
CDX2Q99626 AC006386.1-201ENST00000619436 415 ntBASIC2.17□□□□□ -2.06
CDX2Q99626 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC2.17□□□□□ -2.06
CDX2Q99626 AL078595.3-201ENST00000623815 1166 ntBASIC2.17□□□□□ -2.06
CDX2Q99626 AC008993.2-201ENST00000631744 806 ntBASIC2.17□□□□□ -2.06
CDX2Q99626 AL445984.1-201ENST00000637834 659 ntBASIC2.17□□□□□ -2.06
CDX2Q99626 RNU5E-8P-201ENST00000363502 116 ntBASIC2.16□□□□□ -2.06
CDX2Q99626 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC2.16□□□□□ -2.06
CDX2Q99626 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC2.16□□□□□ -2.06
CDX2Q99626 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC2.16□□□□□ -2.06
CDX2Q99626 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC2.16□□□□□ -2.06
CDX2Q99626 Z80107.1-201ENST00000436830 412 ntBASIC2.16□□□□□ -2.06
CDX2Q99626 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC2.16□□□□□ -2.06
CDX2Q99626 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.16□□□□□ -2.06
CDX2Q99626 AC002381.1-201ENST00000447049 280 ntBASIC2.16□□□□□ -2.06
CDX2Q99626 AC007327.1-201ENST00000447461 264 ntBASIC2.16□□□□□ -2.06
CDX2Q99626 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC2.16□□□□□ -2.06
CDX2Q99626 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC2.16□□□□□ -2.06
CDX2Q99626 AL049714.1-201ENST00000466686 347 ntBASIC2.16□□□□□ -2.06
CDX2Q99626 AC134050.1-201ENST00000495088 933 ntBASIC2.16□□□□□ -2.06
CDX2Q99626 TBCAP3-201ENST00000512475 312 ntBASIC2.16□□□□□ -2.06
CDX2Q99626 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC2.16□□□□□ -2.06
CDX2Q99626 SCARNA15.2-201ENST00000516409 127 ntBASIC2.16□□□□□ -2.06
CDX2Q99626 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC2.16□□□□□ -2.06
CDX2Q99626 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC2.16□□□□□ -2.06
CDX2Q99626 OR4R1P-201ENST00000529879 463 ntBASIC2.16□□□□□ -2.06
CDX2Q99626 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.16□□□□□ -2.06
CDX2Q99626 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC2.16□□□□□ -2.06
CDX2Q99626 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC2.16□□□□□ -2.06
CDX2Q99626 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC2.16□□□□□ -2.06
CDX2Q99626 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
CDX2Q99626 ACTR3BP3-201ENST00000565577 979 ntBASIC2.16□□□□□ -2.06
CDX2Q99626 AGGF1P5-201ENST00000567900 919 ntBASIC2.16□□□□□ -2.06
CDX2Q99626 ANKRD36BP2-206ENST00000575193 1245 ntBASIC2.16□□□□□ -2.06
CDX2Q99626 AC007336.1-201ENST00000576365 3828 ntBASIC2.16□□□□□ -2.06
CDX2Q99626 AP001269.3-201ENST00000588718 329 ntBASIC2.16□□□□□ -2.06
CDX2Q99626 DUXAP3-201ENST00000603616 594 ntBASIC2.16□□□□□ -2.06
CDX2Q99626 AC022960.3-201ENST00000619794 441 ntBASIC2.16□□□□□ -2.06
CDX2Q99626 AL589994.2-201ENST00000621124 579 ntBASIC2.16□□□□□ -2.06
CDX2Q99626 AC091953.2-201ENST00000623979 160 ntBASIC2.16□□□□□ -2.06
CDX2Q99626 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC2.16□□□□□ -2.06
CDX2Q99626 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.15□□□□□ -2.06
CDX2Q99626 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.15□□□□□ -2.07
CDX2Q99626 ZNF29P-201ENST00000225587 168 ntBASIC2.15□□□□□ -2.07
CDX2Q99626 SNORD114-26-201ENST00000363543 72 ntBASIC2.15□□□□□ -2.07
CDX2Q99626 Y_RNA.192-201ENST00000363977 102 ntBASIC2.15□□□□□ -2.07
CDX2Q99626 Y_RNA.311-201ENST00000365068 96 ntBASIC2.15□□□□□ -2.07
CDX2Q99626 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
CDX2Q99626 SET-203ENST00000372688 801 ntTSL 2 BASIC2.15□□□□□ -2.07
CDX2Q99626 MIR514A1-201ENST00000385133 98 ntBASIC2.15□□□□□ -2.07
CDX2Q99626 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
CDX2Q99626 SNORA48.3-201ENST00000391081 134 ntBASIC2.15□□□□□ -2.07
CDX2Q99626 AL139156.1-201ENST00000412785 841 ntBASIC2.15□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 104.1 ms