Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 AC005592.1-201ENST00000566527 1640 ntBASIC4.17□□□□□ -1.74
CDK5RAP1Q96SZ6 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC4.16□□□□□ -1.74
CDK5RAP1Q96SZ6 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC4.16□□□□□ -1.74
CDK5RAP1Q96SZ6 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC4.16□□□□□ -1.74
CDK5RAP1Q96SZ6 MARK2P15-201ENST00000432204 2186 ntBASIC4.16□□□□□ -1.74
CDK5RAP1Q96SZ6 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
CDK5RAP1Q96SZ6 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC4.16□□□□□ -1.74
CDK5RAP1Q96SZ6 Y_RNA.126-201ENST00000363382 111 ntBASIC4.16□□□□□ -1.74
CDK5RAP1Q96SZ6 RN7SKP280-201ENST00000364196 304 ntBASIC4.16□□□□□ -1.74
CDK5RAP1Q96SZ6 RNU6-266P-201ENST00000364225 107 ntBASIC4.16□□□□□ -1.74
CDK5RAP1Q96SZ6 RNA5SP97-201ENST00000365006 84 ntBASIC4.16□□□□□ -1.74
CDK5RAP1Q96SZ6 RNU6-61P-201ENST00000365528 109 ntBASIC4.16□□□□□ -1.74
CDK5RAP1Q96SZ6 Y_RNA.489-201ENST00000384410 101 ntBASIC4.16□□□□□ -1.74
CDK5RAP1Q96SZ6 RNU6-306P-201ENST00000384617 107 ntBASIC4.16□□□□□ -1.74
CDK5RAP1Q96SZ6 RNU6-823P-201ENST00000391042 103 ntBASIC4.16□□□□□ -1.74
CDK5RAP1Q96SZ6 MIR450B-201ENST00000401182 78 ntBASIC4.16□□□□□ -1.74
CDK5RAP1Q96SZ6 AL024474.1-201ENST00000404655 591 ntBASIC4.16□□□□□ -1.74
CDK5RAP1Q96SZ6 Y_RNA.594-201ENST00000410373 140 ntBASIC4.16□□□□□ -1.74
CDK5RAP1Q96SZ6 RNU2-64P-201ENST00000411315 191 ntBASIC4.16□□□□□ -1.74
CDK5RAP1Q96SZ6 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC4.16□□□□□ -1.74
CDK5RAP1Q96SZ6 MRPS18CP6-201ENST00000423587 223 ntBASIC4.16□□□□□ -1.74
CDK5RAP1Q96SZ6 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC4.16□□□□□ -1.74
CDK5RAP1Q96SZ6 DYNLT3P2-201ENST00000442517 295 ntBASIC4.16□□□□□ -1.74
CDK5RAP1Q96SZ6 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC4.16□□□□□ -1.74
CDK5RAP1Q96SZ6 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC4.16□□□□□ -1.74
CDK5RAP1Q96SZ6 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC4.16□□□□□ -1.74
CDK5RAP1Q96SZ6 snoU13.8-201ENST00000458890 104 ntBASIC4.16□□□□□ -1.74
CDK5RAP1Q96SZ6 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC4.16□□□□□ -1.74
CDK5RAP1Q96SZ6 AC022447.4-201ENST00000504053 364 ntBASIC4.16□□□□□ -1.74
CDK5RAP1Q96SZ6 RNU6-470P-201ENST00000515954 104 ntBASIC4.16□□□□□ -1.74
CDK5RAP1Q96SZ6 RNU7-51P-201ENST00000516560 62 ntBASIC4.16□□□□□ -1.74
CDK5RAP1Q96SZ6 RNA5SP384-201ENST00000516615 116 ntBASIC4.16□□□□□ -1.74
CDK5RAP1Q96SZ6 IGKV2-38-201ENST00000517443 247 ntBASIC4.16□□□□□ -1.74
CDK5RAP1Q96SZ6 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC4.16□□□□□ -1.74
CDK5RAP1Q96SZ6 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC4.16□□□□□ -1.74
CDK5RAP1Q96SZ6 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC4.16□□□□□ -1.74
CDK5RAP1Q96SZ6 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC4.16□□□□□ -1.74
CDK5RAP1Q96SZ6 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC4.16□□□□□ -1.74
CDK5RAP1Q96SZ6 AC092447.9-201ENST00000603395 144 ntBASIC4.16□□□□□ -1.74
CDK5RAP1Q96SZ6 SNORD58B-201ENST00000607313 66 ntBASIC4.16□□□□□ -1.74
CDK5RAP1Q96SZ6 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC4.16□□□□□ -1.74
CDK5RAP1Q96SZ6 AC010378.1-201ENST00000619270 362 ntBASIC4.16□□□□□ -1.74
CDK5RAP1Q96SZ6 AC025034.2-201ENST00000623264 286 ntBASIC4.16□□□□□ -1.74
CDK5RAP1Q96SZ6 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC4.16□□□□□ -1.74
CDK5RAP1Q96SZ6 U6.114-201ENST00000636407 96 ntBASIC4.16□□□□□ -1.74
CDK5RAP1Q96SZ6 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.16□□□□□ -1.74
CDK5RAP1Q96SZ6 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC4.16□□□□□ -1.74
CDK5RAP1Q96SZ6 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.16□□□□□ -1.74
CDK5RAP1Q96SZ6 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC4.16□□□□□ -1.74
CDK5RAP1Q96SZ6 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC4.16□□□□□ -1.74
CDK5RAP1Q96SZ6 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.15□□□□□ -1.74
CDK5RAP1Q96SZ6 PTER-201ENST00000298942 3448 ntTSL 5 BASIC4.15□□□□□ -1.74
CDK5RAP1Q96SZ6 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC4.15□□□□□ -1.74
CDK5RAP1Q96SZ6 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
CDK5RAP1Q96SZ6 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
CDK5RAP1Q96SZ6 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC4.15□□□□□ -1.74
CDK5RAP1Q96SZ6 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.75
CDK5RAP1Q96SZ6 AC007685.1-201ENST00000329806 452 ntBASIC4.15□□□□□ -1.75
CDK5RAP1Q96SZ6 RNA5SP258-201ENST00000362750 119 ntBASIC4.15□□□□□ -1.75
CDK5RAP1Q96SZ6 RNU6-179P-201ENST00000363350 107 ntBASIC4.15□□□□□ -1.75
CDK5RAP1Q96SZ6 Y_RNA.222-201ENST00000364264 102 ntBASIC4.15□□□□□ -1.75
CDK5RAP1Q96SZ6 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
CDK5RAP1Q96SZ6 RNU6-1062P-201ENST00000383908 107 ntBASIC4.15□□□□□ -1.75
CDK5RAP1Q96SZ6 RNU6-1293P-201ENST00000384077 107 ntBASIC4.15□□□□□ -1.75
CDK5RAP1Q96SZ6 SNORA75.6-201ENST00000391318 127 ntBASIC4.15□□□□□ -1.75
CDK5RAP1Q96SZ6 EIF4E2P1-201ENST00000393781 255 ntBASIC4.15□□□□□ -1.75
CDK5RAP1Q96SZ6 RNU6-1050P-201ENST00000410388 107 ntBASIC4.15□□□□□ -1.75
CDK5RAP1Q96SZ6 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC4.15□□□□□ -1.75
CDK5RAP1Q96SZ6 AC236972.1-201ENST00000433225 199 ntBASIC4.15□□□□□ -1.75
CDK5RAP1Q96SZ6 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC4.15□□□□□ -1.75
CDK5RAP1Q96SZ6 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC4.15□□□□□ -1.75
CDK5RAP1Q96SZ6 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC4.15□□□□□ -1.75
CDK5RAP1Q96SZ6 RPS11P1-201ENST00000451072 473 ntBASIC4.15□□□□□ -1.75
CDK5RAP1Q96SZ6 TRBV26-201ENST00000456572 344 ntBASIC4.15□□□□□ -1.75
CDK5RAP1Q96SZ6 RPL21P103-201ENST00000479921 488 ntBASIC4.15□□□□□ -1.75
CDK5RAP1Q96SZ6 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC4.15□□□□□ -1.75
CDK5RAP1Q96SZ6 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC4.15□□□□□ -1.75
CDK5RAP1Q96SZ6 AC079140.5-201ENST00000507882 310 ntBASIC4.15□□□□□ -1.75
CDK5RAP1Q96SZ6 AC093853.1-201ENST00000515689 483 ntBASIC4.15□□□□□ -1.75
CDK5RAP1Q96SZ6 RNU6-798P-201ENST00000516912 103 ntBASIC4.15□□□□□ -1.75
CDK5RAP1Q96SZ6 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC4.15□□□□□ -1.75
CDK5RAP1Q96SZ6 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC4.15□□□□□ -1.75
CDK5RAP1Q96SZ6 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC4.15□□□□□ -1.75
CDK5RAP1Q96SZ6 AC023157.2-201ENST00000540596 141 ntBASIC4.15□□□□□ -1.75
CDK5RAP1Q96SZ6 AC007375.1-201ENST00000554513 578 ntBASIC4.15□□□□□ -1.75
CDK5RAP1Q96SZ6 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC4.15□□□□□ -1.75
CDK5RAP1Q96SZ6 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC4.15□□□□□ -1.75
CDK5RAP1Q96SZ6 AC078899.3-201ENST00000599065 212 ntBASIC4.15□□□□□ -1.75
CDK5RAP1Q96SZ6 RNU6-156P-201ENST00000621869 107 ntBASIC4.15□□□□□ -1.75
CDK5RAP1Q96SZ6 AL357559.1-201ENST00000622228 274 ntBASIC4.15□□□□□ -1.75
CDK5RAP1Q96SZ6 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC4.15□□□□□ -1.75
CDK5RAP1Q96SZ6 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC4.15□□□□□ -1.75
CDK5RAP1Q96SZ6 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC4.15□□□□□ -1.75
CDK5RAP1Q96SZ6 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC4.15□□□□□ -1.75
CDK5RAP1Q96SZ6 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC4.15□□□□□ -1.75
CDK5RAP1Q96SZ6 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC4.15□□□□□ -1.75
CDK5RAP1Q96SZ6 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
CDK5RAP1Q96SZ6 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC4.14□□□□□ -1.75
CDK5RAP1Q96SZ6 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC4.14□□□□□ -1.75
CDK5RAP1Q96SZ6 AL161912.2-201ENST00000565707 3007 ntBASIC4.14□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 163.2 ms