Protein–RNA interactions for Protein: Q96RI1

NR1H4, Bile acid receptor, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4Q96RI1 Y_RNA.576-201ENST00000384781 102 ntBASIC3.2□□□□□ -1.9
NR1H4Q96RI1 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC3.2□□□□□ -1.9
NR1H4Q96RI1 RPL26P27-201ENST00000414397 437 ntBASIC3.2□□□□□ -1.9
NR1H4Q96RI1 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC3.2□□□□□ -1.9
NR1H4Q96RI1 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC3.2□□□□□ -1.9
NR1H4Q96RI1 HSPE1P1-201ENST00000421494 318 ntBASIC3.2□□□□□ -1.9
NR1H4Q96RI1 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.2□□□□□ -1.9
NR1H4Q96RI1 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.2□□□□□ -1.9
NR1H4Q96RI1 MTCO2P19-201ENST00000427513 598 ntBASIC3.2□□□□□ -1.9
NR1H4Q96RI1 HMGB1P9-201ENST00000429856 646 ntBASIC3.2□□□□□ -1.9
NR1H4Q96RI1 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC3.2□□□□□ -1.9
NR1H4Q96RI1 RPL21P2-201ENST00000440049 481 ntBASIC3.2□□□□□ -1.9
NR1H4Q96RI1 DNAJC19P4-201ENST00000440115 345 ntBASIC3.2□□□□□ -1.9
NR1H4Q96RI1 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC3.2□□□□□ -1.9
NR1H4Q96RI1 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.2□□□□□ -1.9
NR1H4Q96RI1 RPS29P15-201ENST00000458329 171 ntBASIC3.2□□□□□ -1.9
NR1H4Q96RI1 RNU7-63P-201ENST00000459054 62 ntBASIC3.2□□□□□ -1.9
NR1H4Q96RI1 RNU7-23P-201ENST00000459465 62 ntBASIC3.2□□□□□ -1.9
NR1H4Q96RI1 AC126182.1-201ENST00000478134 357 ntBASIC3.2□□□□□ -1.9
NR1H4Q96RI1 EIF4EP3-201ENST00000498782 656 ntBASIC3.2□□□□□ -1.9
NR1H4Q96RI1 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC3.2□□□□□ -1.9
NR1H4Q96RI1 AP003122.3-201ENST00000526316 255 ntBASIC3.2□□□□□ -1.9
NR1H4Q96RI1 AC084851.1-201ENST00000529105 249 ntBASIC3.2□□□□□ -1.9
NR1H4Q96RI1 OR5BN1P-201ENST00000532955 829 ntBASIC3.2□□□□□ -1.9
NR1H4Q96RI1 AC022880.1-201ENST00000534017 973 ntBASIC3.2□□□□□ -1.9
NR1H4Q96RI1 NACAP3-201ENST00000552100 481 ntBASIC3.2□□□□□ -1.9
NR1H4Q96RI1 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC3.2□□□□□ -1.9
NR1H4Q96RI1 DNAJC8P1-201ENST00000554535 372 ntBASIC3.2□□□□□ -1.9
NR1H4Q96RI1 AL157871.3-201ENST00000557231 293 ntBASIC3.2□□□□□ -1.9
NR1H4Q96RI1 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC3.2□□□□□ -1.9
NR1H4Q96RI1 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC3.2□□□□□ -1.9
NR1H4Q96RI1 AC008521.1-201ENST00000587471 187 ntBASIC3.2□□□□□ -1.9
NR1H4Q96RI1 AL391646.1-201ENST00000603860 190 ntBASIC3.2□□□□□ -1.9
NR1H4Q96RI1 AL138889.2-201ENST00000603883 242 ntBASIC3.2□□□□□ -1.9
NR1H4Q96RI1 AC069234.5-201ENST00000611056 416 ntBASIC3.2□□□□□ -1.9
NR1H4Q96RI1 AC024940.5-201ENST00000622889 474 ntBASIC3.2□□□□□ -1.9
NR1H4Q96RI1 AC124864.2-201ENST00000624736 186 ntBASIC3.2□□□□□ -1.9
NR1H4Q96RI1 MIR492-201ENST00000638676 116 ntBASIC3.2□□□□□ -1.9
NR1H4Q96RI1 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.2□□□□□ -1.9
NR1H4Q96RI1 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
NR1H4Q96RI1 DPY19L2P2-203ENST00000435536 1858 ntBASIC3.2□□□□□ -1.9
NR1H4Q96RI1 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC3.19□□□□□ -1.9
NR1H4Q96RI1 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC3.19□□□□□ -1.9
NR1H4Q96RI1 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
NR1H4Q96RI1 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.19□□□□□ -1.9
NR1H4Q96RI1 SPRR2C-201ENST00000290702 219 ntBASIC3.19□□□□□ -1.9
NR1H4Q96RI1 AC126755.2-208ENST00000327792 462 ntBASIC3.19□□□□□ -1.9
NR1H4Q96RI1 AC138969.1-213ENST00000331436 462 ntBASIC3.19□□□□□ -1.9
NR1H4Q96RI1 RNU6-799P-201ENST00000363567 107 ntBASIC3.19□□□□□ -1.9
NR1H4Q96RI1 SNORD115-7-201ENST00000365306 82 ntBASIC3.19□□□□□ -1.9
NR1H4Q96RI1 RNU6-395P-201ENST00000365662 106 ntBASIC3.19□□□□□ -1.9
NR1H4Q96RI1 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC3.19□□□□□ -1.9
NR1H4Q96RI1 RNU6-1027P-201ENST00000383998 107 ntBASIC3.19□□□□□ -1.9
NR1H4Q96RI1 RPL7P10-201ENST00000417407 739 ntBASIC3.19□□□□□ -1.9
NR1H4Q96RI1 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC3.19□□□□□ -1.9
NR1H4Q96RI1 TIMM9P3-201ENST00000428659 274 ntBASIC3.19□□□□□ -1.9
NR1H4Q96RI1 AC104332.2-201ENST00000429959 156 ntBASIC3.19□□□□□ -1.9
NR1H4Q96RI1 AC114755.5-201ENST00000447760 831 ntBASIC3.19□□□□□ -1.9
NR1H4Q96RI1 RPL23AP20-201ENST00000447965 421 ntBASIC3.19□□□□□ -1.9
NR1H4Q96RI1 Z99127.3-201ENST00000448158 395 ntBASIC3.19□□□□□ -1.9
NR1H4Q96RI1 MTND1P18-201ENST00000448191 573 ntBASIC3.19□□□□□ -1.9
NR1H4Q96RI1 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC3.19□□□□□ -1.9
NR1H4Q96RI1 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC3.19□□□□□ -1.9
NR1H4Q96RI1 AC027673.1-201ENST00000456245 405 ntBASIC3.19□□□□□ -1.9
NR1H4Q96RI1 AL356010.1-201ENST00000456364 102 ntBASIC3.19□□□□□ -1.9
NR1H4Q96RI1 SRRM1P2-201ENST00000464531 1192 ntBASIC3.19□□□□□ -1.9
NR1H4Q96RI1 FPGT-203ENST00000467578 601 ntTSL 2 BASIC3.19□□□□□ -1.9
NR1H4Q96RI1 RN7SL499P-201ENST00000481141 276 ntBASIC3.19□□□□□ -1.9
NR1H4Q96RI1 RPS3AP14-201ENST00000483907 780 ntBASIC3.19□□□□□ -1.9
NR1H4Q96RI1 RBBP4P6-201ENST00000508098 202 ntBASIC3.19□□□□□ -1.9
NR1H4Q96RI1 AC114786.4-201ENST00000508771 728 ntBASIC3.19□□□□□ -1.9
NR1H4Q96RI1 RNU1-103P-201ENST00000516502 125 ntBASIC3.19□□□□□ -1.9
NR1H4Q96RI1 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC3.19□□□□□ -1.9
NR1H4Q96RI1 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC3.19□□□□□ -1.9
NR1H4Q96RI1 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC3.19□□□□□ -1.9
NR1H4Q96RI1 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC3.19□□□□□ -1.9
NR1H4Q96RI1 MIR1273C-201ENST00000578669 77 ntBASIC3.19□□□□□ -1.9
NR1H4Q96RI1 NUTF2P8-201ENST00000604593 363 ntBASIC3.19□□□□□ -1.9
NR1H4Q96RI1 AL109618.2-201ENST00000605527 211 ntBASIC3.19□□□□□ -1.9
NR1H4Q96RI1 AC008945.2-201ENST00000606056 604 ntBASIC3.19□□□□□ -1.9
NR1H4Q96RI1 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC3.19□□□□□ -1.9
NR1H4Q96RI1 AP001486.3-201ENST00000615334 372 ntBASIC3.19□□□□□ -1.9
NR1H4Q96RI1 SNORD39.4-201ENST00000620099 78 ntBASIC3.19□□□□□ -1.9
NR1H4Q96RI1 AP003355.3-201ENST00000623465 114 ntBASIC3.19□□□□□ -1.9
NR1H4Q96RI1 AC139792.3-201ENST00000623525 224 ntBASIC3.19□□□□□ -1.9
NR1H4Q96RI1 AC098679.4-201ENST00000624241 654 ntBASIC3.19□□□□□ -1.9
NR1H4Q96RI1 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC3.19□□□□□ -1.9
NR1H4Q96RI1 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC3.19□□□□□ -1.9
NR1H4Q96RI1 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
NR1H4Q96RI1 AC092435.3-201ENST00000565538 3654 ntBASIC3.19□□□□□ -1.9
NR1H4Q96RI1 AC032011.1-201ENST00000611703 1549 ntBASIC3.19□□□□□ -1.9
NR1H4Q96RI1 AC093010.3-201ENST00000570269 15214 ntBASIC3.18□□□□□ -1.9
NR1H4Q96RI1 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.18□□□□□ -1.9
NR1H4Q96RI1 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.18□□□□□ -1.9
NR1H4Q96RI1 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
NR1H4Q96RI1 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
NR1H4Q96RI1 Y_RNA.33-201ENST00000362591 102 ntBASIC3.18□□□□□ -1.9
NR1H4Q96RI1 RNU1-105P-201ENST00000363470 161 ntBASIC3.18□□□□□ -1.9
NR1H4Q96RI1 SNORA4.3-201ENST00000365564 137 ntBASIC3.18□□□□□ -1.9
NR1H4Q96RI1 CD24P4-201ENST00000382840 243 ntBASIC3.18□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 103.9 ms