Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 RBM43P1-201ENST00000476891 1081 ntBASIC2.14□□□□□ -2.07
COL21A1Q96P44 RPS15AP34-201ENST00000487776 387 ntBASIC2.14□□□□□ -2.07
COL21A1Q96P44 WDR78-207ENST00000488333 613 ntTSL 3 BASIC2.14□□□□□ -2.07
COL21A1Q96P44 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC2.14□□□□□ -2.07
COL21A1Q96P44 MTND5P13-201ENST00000513046 1079 ntBASIC2.14□□□□□ -2.07
COL21A1Q96P44 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC2.14□□□□□ -2.07
COL21A1Q96P44 AC023538.1-201ENST00000534576 736 ntBASIC2.14□□□□□ -2.07
COL21A1Q96P44 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
COL21A1Q96P44 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC2.14□□□□□ -2.07
COL21A1Q96P44 MIR5694-201ENST00000581190 76 ntBASIC2.14□□□□□ -2.07
COL21A1Q96P44 MIR5007-201ENST00000583098 95 ntBASIC2.14□□□□□ -2.07
COL21A1Q96P44 HMGN2P15-201ENST00000585707 270 ntBASIC2.14□□□□□ -2.07
COL21A1Q96P44 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC2.14□□□□□ -2.07
COL21A1Q96P44 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC2.14□□□□□ -2.07
COL21A1Q96P44 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC2.14□□□□□ -2.07
COL21A1Q96P44 AC011458.1-201ENST00000604034 617 ntBASIC2.14□□□□□ -2.07
COL21A1Q96P44 AC097478.2-201ENST00000610572 514 ntBASIC2.14□□□□□ -2.07
COL21A1Q96P44 AC006386.1-201ENST00000619436 415 ntBASIC2.14□□□□□ -2.07
COL21A1Q96P44 AL160394.1-201ENST00000624765 724 ntBASIC2.14□□□□□ -2.07
COL21A1Q96P44 MIR203B-201ENST00000636080 86 ntBASIC2.14□□□□□ -2.07
COL21A1Q96P44 AC099654.8-201ENST00000637757 681 ntBASIC2.14□□□□□ -2.07
COL21A1Q96P44 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
COL21A1Q96P44 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.14□□□□□ -2.07
COL21A1Q96P44 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
COL21A1Q96P44 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
COL21A1Q96P44 RNU6-289P-201ENST00000364093 107 ntBASIC2.13□□□□□ -2.07
COL21A1Q96P44 Y_RNA.238-201ENST00000364441 102 ntBASIC2.13□□□□□ -2.07
COL21A1Q96P44 RNU1-39P-201ENST00000383897 165 ntBASIC2.13□□□□□ -2.07
COL21A1Q96P44 MIR1305-201ENST00000408300 86 ntBASIC2.13□□□□□ -2.07
COL21A1Q96P44 RNU4-22P-201ENST00000411058 166 ntBASIC2.13□□□□□ -2.07
COL21A1Q96P44 AC007064.1-201ENST00000412238 351 ntBASIC2.13□□□□□ -2.07
COL21A1Q96P44 AC107081.1-201ENST00000414975 361 ntBASIC2.13□□□□□ -2.07
COL21A1Q96P44 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC2.13□□□□□ -2.07
COL21A1Q96P44 AL445687.1-201ENST00000439946 251 ntBASIC2.13□□□□□ -2.07
COL21A1Q96P44 AC009296.1-201ENST00000443146 155 ntBASIC2.13□□□□□ -2.07
COL21A1Q96P44 HIGD1AP2-201ENST00000446367 280 ntBASIC2.13□□□□□ -2.07
COL21A1Q96P44 EEF1E1P1-201ENST00000446998 430 ntBASIC2.13□□□□□ -2.07
COL21A1Q96P44 AC020550.1-201ENST00000447385 163 ntBASIC2.13□□□□□ -2.07
COL21A1Q96P44 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC2.13□□□□□ -2.07
COL21A1Q96P44 AC233279.1-201ENST00000455300 423 ntBASIC2.13□□□□□ -2.07
COL21A1Q96P44 RNU7-59P-201ENST00000459101 61 ntBASIC2.13□□□□□ -2.07
COL21A1Q96P44 AC005410.1-202ENST00000460347 485 ntBASIC2.13□□□□□ -2.07
COL21A1Q96P44 RPL7P18-201ENST00000478965 734 ntBASIC2.13□□□□□ -2.07
COL21A1Q96P44 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC2.13□□□□□ -2.07
COL21A1Q96P44 MRPL42P6-201ENST00000486397 371 ntBASIC2.13□□□□□ -2.07
COL21A1Q96P44 HMGB1P36-201ENST00000487709 576 ntBASIC2.13□□□□□ -2.07
COL21A1Q96P44 RPS15AP36-201ENST00000492022 382 ntBASIC2.13□□□□□ -2.07
COL21A1Q96P44 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC2.13□□□□□ -2.07
COL21A1Q96P44 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC2.13□□□□□ -2.07
COL21A1Q96P44 AC119751.4-201ENST00000507498 357 ntBASIC2.13□□□□□ -2.07
COL21A1Q96P44 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC2.13□□□□□ -2.07
COL21A1Q96P44 RNU6ATAC13P-201ENST00000516152 131 ntBASIC2.13□□□□□ -2.07
COL21A1Q96P44 RNA5SP290-201ENST00000517133 127 ntBASIC2.13□□□□□ -2.07
COL21A1Q96P44 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC2.13□□□□□ -2.07
COL21A1Q96P44 AC068587.4-201ENST00000533893 186 ntBASIC2.13□□□□□ -2.07
COL21A1Q96P44 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC2.13□□□□□ -2.07
COL21A1Q96P44 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC2.13□□□□□ -2.07
COL21A1Q96P44 AP002770.2-201ENST00000543613 532 ntBASIC2.13□□□□□ -2.07
COL21A1Q96P44 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
COL21A1Q96P44 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC2.13□□□□□ -2.07
COL21A1Q96P44 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC2.13□□□□□ -2.07
COL21A1Q96P44 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC2.13□□□□□ -2.07
COL21A1Q96P44 MIR4509-3-201ENST00000578671 94 ntBASIC2.13□□□□□ -2.07
COL21A1Q96P44 AC060771.1-201ENST00000582031 164 ntBASIC2.13□□□□□ -2.07
COL21A1Q96P44 MIR4509-2-201ENST00000583920 94 ntBASIC2.13□□□□□ -2.07
COL21A1Q96P44 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC2.13□□□□□ -2.07
COL21A1Q96P44 AL391001.1-201ENST00000602747 715 ntBASIC2.13□□□□□ -2.07
COL21A1Q96P44 AC098826.3-201ENST00000603823 466 ntBASIC2.13□□□□□ -2.07
COL21A1Q96P44 AC103710.1-201ENST00000610003 901 ntBASIC2.13□□□□□ -2.07
COL21A1Q96P44 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC2.13□□□□□ -2.07
COL21A1Q96P44 MIR4509-1-201ENST00000618224 94 ntBASIC2.13□□□□□ -2.07
COL21A1Q96P44 AL590808.1-201ENST00000618696 141 ntBASIC2.13□□□□□ -2.07
COL21A1Q96P44 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC2.13□□□□□ -2.07
COL21A1Q96P44 MIR6766-201ENST00000622641 72 ntBASIC2.13□□□□□ -2.07
COL21A1Q96P44 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
COL21A1Q96P44 AL445984.1-201ENST00000637834 659 ntBASIC2.13□□□□□ -2.07
COL21A1Q96P44 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.13□□□□□ -2.07
COL21A1Q96P44 AK9-203ENST00000368948 2478 ntTSL 5 BASIC2.13□□□□□ -2.07
COL21A1Q96P44 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC2.13□□□□□ -2.07
COL21A1Q96P44 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC2.13□□□□□ -2.07
COL21A1Q96P44 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC2.12□□□□□ -2.07
COL21A1Q96P44 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.12□□□□□ -2.07
COL21A1Q96P44 AC110491.1-201ENST00000562191 2010 ntBASIC2.12□□□□□ -2.07
COL21A1Q96P44 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.12□□□□□ -2.07
COL21A1Q96P44 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
COL21A1Q96P44 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
COL21A1Q96P44 RNU6-884P-201ENST00000363889 107 ntBASIC2.12□□□□□ -2.07
COL21A1Q96P44 RNU6-853P-201ENST00000364306 107 ntBASIC2.12□□□□□ -2.07
COL21A1Q96P44 Y_RNA.245-201ENST00000364493 95 ntBASIC2.12□□□□□ -2.07
COL21A1Q96P44 RNA5SP37-201ENST00000365420 130 ntBASIC2.12□□□□□ -2.07
COL21A1Q96P44 SNORD116.1-201ENST00000365628 92 ntBASIC2.12□□□□□ -2.07
COL21A1Q96P44 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
COL21A1Q96P44 RNU6-1083P-201ENST00000384022 107 ntBASIC2.12□□□□□ -2.07
COL21A1Q96P44 RNU6-925P-201ENST00000384629 104 ntBASIC2.12□□□□□ -2.07
COL21A1Q96P44 MIR122-201ENST00000385044 85 ntBASIC2.12□□□□□ -2.07
COL21A1Q96P44 RNU4-53P-201ENST00000410828 140 ntBASIC2.12□□□□□ -2.07
COL21A1Q96P44 RPL26P27-201ENST00000414397 437 ntBASIC2.12□□□□□ -2.07
COL21A1Q96P44 USP9YP24-201ENST00000434374 697 ntBASIC2.12□□□□□ -2.07
COL21A1Q96P44 SNRPEP9-201ENST00000436794 238 ntBASIC2.12□□□□□ -2.07
COL21A1Q96P44 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.12□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 104.5 ms