Protein–RNA interactions for Protein: Q96JI7

SPG11, Spatacsin, humanhuman

Predictions only

Length 2,443 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11Q96JI7 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC0.63□□□□□ -2.31
SPG11Q96JI7 CLIC4P1-201ENST00000453177 535 ntBASIC0.63□□□□□ -2.31
SPG11Q96JI7 MTATP6P22-201ENST00000507369 598 ntBASIC0.63□□□□□ -2.31
SPG11Q96JI7 AC100801.1-201ENST00000517368 517 ntTSL 3 BASIC0.63□□□□□ -2.31
SPG11Q96JI7 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC0.63□□□□□ -2.31
SPG11Q96JI7 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC0.63□□□□□ -2.31
SPG11Q96JI7 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC0.63□□□□□ -2.31
SPG11Q96JI7 SNORD84-203ENST00000584275 78 ntBASIC0.63□□□□□ -2.31
SPG11Q96JI7 SNRPGP17-201ENST00000603780 214 ntBASIC0.63□□□□□ -2.31
SPG11Q96JI7 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC0.62□□□□□ -2.31
SPG11Q96JI7 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.62□□□□□ -2.31
SPG11Q96JI7 AL391516.1-201ENST00000554380 2449 ntBASIC0.62□□□□□ -2.31
SPG11Q96JI7 MIR1207-201ENST00000408249 87 ntBASIC0.62□□□□□ -2.31
SPG11Q96JI7 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC0.62□□□□□ -2.31
SPG11Q96JI7 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC0.62□□□□□ -2.31
SPG11Q96JI7 AC010099.1-201ENST00000455434 375 ntBASIC0.62□□□□□ -2.31
SPG11Q96JI7 MTND3P24-201ENST00000506306 329 ntBASIC0.62□□□□□ -2.31
SPG11Q96JI7 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC0.62□□□□□ -2.31
SPG11Q96JI7 AC022662.1-201ENST00000580252 331 ntBASIC0.62□□□□□ -2.31
SPG11Q96JI7 VN1R84P-201ENST00000593697 235 ntBASIC0.62□□□□□ -2.31
SPG11Q96JI7 AL050343.2-201ENST00000607338 280 ntBASIC0.62□□□□□ -2.31
SPG11Q96JI7 ZNF702P-202ENST00000434269 1966 ntBASIC0.62□□□□□ -2.31
SPG11Q96JI7 Y_RNA.18-201ENST00000362461 102 ntBASIC0.62□□□□□ -2.31
SPG11Q96JI7 MIR524-201ENST00000385242 87 ntBASIC0.62□□□□□ -2.31
SPG11Q96JI7 USP12PX-201ENST00000432383 1057 ntBASIC0.62□□□□□ -2.31
SPG11Q96JI7 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC0.62□□□□□ -2.31
SPG11Q96JI7 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC0.62□□□□□ -2.31
SPG11Q96JI7 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC0.62□□□□□ -2.31
SPG11Q96JI7 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC0.62□□□□□ -2.31
SPG11Q96JI7 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC0.62□□□□□ -2.31
SPG11Q96JI7 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC0.61□□□□□ -2.31
SPG11Q96JI7 RNA5SP276-201ENST00000362580 94 ntBASIC0.61□□□□□ -2.31
SPG11Q96JI7 CD24P4-201ENST00000382840 243 ntBASIC0.61□□□□□ -2.31
SPG11Q96JI7 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC0.61□□□□□ -2.31
SPG11Q96JI7 AL357134.1-201ENST00000445848 426 ntBASIC0.61□□□□□ -2.31
SPG11Q96JI7 HSPE1P24-201ENST00000450782 238 ntBASIC0.61□□□□□ -2.31
SPG11Q96JI7 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC0.61□□□□□ -2.31
SPG11Q96JI7 SNORA3.4-201ENST00000515969 96 ntBASIC0.61□□□□□ -2.31
SPG11Q96JI7 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC0.61□□□□□ -2.31
SPG11Q96JI7 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC0.61□□□□□ -2.31
SPG11Q96JI7 NBEAP1-201ENST00000554452 979 ntBASIC0.61□□□□□ -2.31
SPG11Q96JI7 RSL24D1P11-201ENST00000591045 491 ntBASIC0.61□□□□□ -2.31
SPG11Q96JI7 AL161734.1-201ENST00000609720 557 ntBASIC0.61□□□□□ -2.31
SPG11Q96JI7 AL390240.1-201ENST00000612950 384 ntBASIC0.61□□□□□ -2.31
SPG11Q96JI7 MIR5087-201ENST00000635826 76 ntBASIC0.61□□□□□ -2.31
SPG11Q96JI7 ZNF33BP1-201ENST00000452497 1834 ntBASIC0.61□□□□□ -2.31
SPG11Q96JI7 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.61□□□□□ -2.31
SPG11Q96JI7 CBX3P1-201ENST00000325243 554 ntBASIC0.6□□□□□ -2.31
SPG11Q96JI7 RNU4-42P-201ENST00000364738 142 ntBASIC0.6□□□□□ -2.31
SPG11Q96JI7 RNU6-629P-201ENST00000384061 103 ntBASIC0.6□□□□□ -2.31
SPG11Q96JI7 NUP35P2-201ENST00000416748 943 ntBASIC0.6□□□□□ -2.31
SPG11Q96JI7 AC119618.1-201ENST00000434191 222 ntBASIC0.6□□□□□ -2.31
SPG11Q96JI7 PCNAP1-201ENST00000505363 709 ntBASIC0.6□□□□□ -2.31
SPG11Q96JI7 MTND5P11-201ENST00000511037 1812 ntBASIC0.6□□□□□ -2.31
SPG11Q96JI7 SNORA14A-201ENST00000364773 135 ntBASIC0.6□□□□□ -2.31
SPG11Q96JI7 SNORA4.3-201ENST00000365564 137 ntBASIC0.6□□□□□ -2.31
SPG11Q96JI7 CISD1P1-201ENST00000393907 327 ntBASIC0.6□□□□□ -2.31
SPG11Q96JI7 AC013268.2-201ENST00000420753 337 ntBASIC0.6□□□□□ -2.31
SPG11Q96JI7 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC0.6□□□□□ -2.31
SPG11Q96JI7 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC0.6□□□□□ -2.31
SPG11Q96JI7 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC0.6□□□□□ -2.31
SPG11Q96JI7 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC0.6□□□□□ -2.31
SPG11Q96JI7 UBE2L4-201ENST00000587688 464 ntBASIC0.6□□□□□ -2.31
SPG11Q96JI7 AC245128.3-201ENST00000594721 748 ntBASIC0.6□□□□□ -2.31
SPG11Q96JI7 AC073592.7-201ENST00000623659 507 ntBASIC0.6□□□□□ -2.31
SPG11Q96JI7 AC087521.4-201ENST00000637427 289 ntTSL 5 BASIC0.6□□□□□ -2.31
SPG11Q96JI7 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC0.6□□□□□ -2.31
SPG11Q96JI7 RNU4-73P-201ENST00000363164 141 ntBASIC0.59□□□□□ -2.31
SPG11Q96JI7 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC0.59□□□□□ -2.31
SPG11Q96JI7 AL356867.1-201ENST00000429623 299 ntBASIC0.59□□□□□ -2.31
SPG11Q96JI7 AC022022.1-201ENST00000430304 178 ntBASIC0.59□□□□□ -2.31
SPG11Q96JI7 RAB9AP5-201ENST00000437794 597 ntBASIC0.59□□□□□ -2.31
SPG11Q96JI7 RAB9AP2-201ENST00000443911 597 ntBASIC0.59□□□□□ -2.31
SPG11Q96JI7 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC0.59□□□□□ -2.31
SPG11Q96JI7 HMGB3P17-201ENST00000504195 649 ntBASIC0.59□□□□□ -2.31
SPG11Q96JI7 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC0.59□□□□□ -2.31
SPG11Q96JI7 SNORA31.25-201ENST00000517242 134 ntBASIC0.59□□□□□ -2.31
SPG11Q96JI7 RNU6-711P-201ENST00000517255 106 ntBASIC0.59□□□□□ -2.31
SPG11Q96JI7 AC008676.3-201ENST00000521237 435 ntBASIC0.59□□□□□ -2.31
SPG11Q96JI7 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC0.59□□□□□ -2.31
SPG11Q96JI7 AC090425.2-201ENST00000608818 501 ntBASIC0.59□□□□□ -2.31
SPG11Q96JI7 AC103710.4-201ENST00000609301 899 ntBASIC0.59□□□□□ -2.31
SPG11Q96JI7 AC022079.2-201ENST00000619739 566 ntBASIC0.59□□□□□ -2.31
SPG11Q96JI7 ELL2P3-201ENST00000457883 1602 ntBASIC0.59□□□□□ -2.31
SPG11Q96JI7 AL157700.1-201ENST00000561973 1432 ntBASIC0.59□□□□□ -2.31
SPG11Q96JI7 KLRF1-201ENST00000279545 1091 ntTSL 1 (best) BASIC0.59□□□□□ -2.32
SPG11Q96JI7 XKRYP1-201ENST00000423438 492 ntBASIC0.59□□□□□ -2.32
SPG11Q96JI7 AC096632.1-201ENST00000427395 310 ntBASIC0.59□□□□□ -2.32
SPG11Q96JI7 XKRYP2-201ENST00000432915 492 ntBASIC0.59□□□□□ -2.32
SPG11Q96JI7 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC0.59□□□□□ -2.32
SPG11Q96JI7 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC0.59□□□□□ -2.32
SPG11Q96JI7 OR5BM1P-201ENST00000512021 366 ntBASIC0.59□□□□□ -2.32
SPG11Q96JI7 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC0.59□□□□□ -2.32
SPG11Q96JI7 CYCSP2-201ENST00000558168 301 ntBASIC0.59□□□□□ -2.32
SPG11Q96JI7 NDUFAF4P1-201ENST00000559425 519 ntBASIC0.59□□□□□ -2.32
SPG11Q96JI7 KLRF1-208ENST00000617889 1241 ntAPPRIS P1 TSL 1 (best) BASIC0.59□□□□□ -2.32
SPG11Q96JI7 AP003122.6-201ENST00000623831 495 ntBASIC0.59□□□□□ -2.32
SPG11Q96JI7 AL390862.1-201ENST00000635467 1469 ntBASIC0.59□□□□□ -2.32
SPG11Q96JI7 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC0.59□□□□□ -2.32
SPG11Q96JI7 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC0.59□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 111.5 ms