Protein–RNA interactions for Protein: Q96JG6

VPS50, Syndetin, humanhuman

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50Q96JG6 RNU5A-1-201ENST00000362698 116 ntBASIC3.65□□□□□ -1.83
VPS50Q96JG6 RNU6-288P-201ENST00000363690 104 ntBASIC3.65□□□□□ -1.83
VPS50Q96JG6 RNA5SP399-201ENST00000364003 117 ntBASIC3.65□□□□□ -1.83
VPS50Q96JG6 RNU6-38P-201ENST00000384085 107 ntBASIC3.65□□□□□ -1.83
VPS50Q96JG6 MIR30B-201ENST00000384850 88 ntBASIC3.65□□□□□ -1.83
VPS50Q96JG6 RNA5SP118-201ENST00000410385 109 ntBASIC3.65□□□□□ -1.83
VPS50Q96JG6 RNU2-29P-201ENST00000410423 189 ntBASIC3.65□□□□□ -1.83
VPS50Q96JG6 Y_RNA.615-201ENST00000410769 117 ntBASIC3.65□□□□□ -1.83
VPS50Q96JG6 AC068533.1-201ENST00000418542 415 ntBASIC3.65□□□□□ -1.83
VPS50Q96JG6 RPL7P46-201ENST00000425129 740 ntBASIC3.65□□□□□ -1.83
VPS50Q96JG6 RPL7L1P10-201ENST00000427790 463 ntBASIC3.65□□□□□ -1.83
VPS50Q96JG6 SRIP2-201ENST00000428470 166 ntBASIC3.65□□□□□ -1.83
VPS50Q96JG6 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC3.65□□□□□ -1.83
VPS50Q96JG6 RPL23AP31-201ENST00000456160 467 ntBASIC3.65□□□□□ -1.83
VPS50Q96JG6 U3.44-201ENST00000458938 192 ntBASIC3.65□□□□□ -1.83
VPS50Q96JG6 RNU6-333P-201ENST00000459117 107 ntBASIC3.65□□□□□ -1.83
VPS50Q96JG6 RNU7-180P-201ENST00000459240 63 ntBASIC3.65□□□□□ -1.83
VPS50Q96JG6 AP002884.2-201ENST00000471647 395 ntBASIC3.65□□□□□ -1.83
VPS50Q96JG6 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC3.65□□□□□ -1.83
VPS50Q96JG6 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC3.65□□□□□ -1.83
VPS50Q96JG6 AC098591.2-201ENST00000510152 315 ntBASIC3.65□□□□□ -1.83
VPS50Q96JG6 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC3.65□□□□□ -1.83
VPS50Q96JG6 AC046134.1-201ENST00000514454 666 ntBASIC3.65□□□□□ -1.83
VPS50Q96JG6 RN7SKP13-201ENST00000515933 244 ntBASIC3.65□□□□□ -1.83
VPS50Q96JG6 RNU1-61P-201ENST00000516107 151 ntBASIC3.65□□□□□ -1.83
VPS50Q96JG6 RNU6-1038P-201ENST00000516516 104 ntBASIC3.65□□□□□ -1.83
VPS50Q96JG6 Y_RNA.689-201ENST00000516589 107 ntBASIC3.65□□□□□ -1.83
VPS50Q96JG6 SNORA67.7-201ENST00000516664 135 ntBASIC3.65□□□□□ -1.83
VPS50Q96JG6 RN7SKP258-201ENST00000517151 304 ntBASIC3.65□□□□□ -1.83
VPS50Q96JG6 AC090877.1-201ENST00000561418 344 ntBASIC3.65□□□□□ -1.83
VPS50Q96JG6 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC3.65□□□□□ -1.83
VPS50Q96JG6 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC3.65□□□□□ -1.83
VPS50Q96JG6 MIR4474-201ENST00000579189 78 ntBASIC3.65□□□□□ -1.83
VPS50Q96JG6 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC3.65□□□□□ -1.83
VPS50Q96JG6 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC3.65□□□□□ -1.83
VPS50Q96JG6 AC018638.8-201ENST00000588755 281 ntBASIC3.65□□□□□ -1.83
VPS50Q96JG6 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC3.65□□□□□ -1.83
VPS50Q96JG6 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC3.65□□□□□ -1.83
VPS50Q96JG6 RNU6-89P-201ENST00000606519 100 ntBASIC3.65□□□□□ -1.83
VPS50Q96JG6 AC069234.5-201ENST00000611056 416 ntBASIC3.65□□□□□ -1.83
VPS50Q96JG6 AC130324.3-201ENST00000614165 542 ntBASIC3.65□□□□□ -1.83
VPS50Q96JG6 MIR6075-201ENST00000620782 95 ntBASIC3.65□□□□□ -1.83
VPS50Q96JG6 AF117829.1-206ENST00000621883 3802 ntBASIC3.65□□□□□ -1.83
VPS50Q96JG6 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC3.65□□□□□ -1.83
VPS50Q96JG6 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
VPS50Q96JG6 MIR4275-201ENST00000636486 87 ntBASIC3.65□□□□□ -1.83
VPS50Q96JG6 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
VPS50Q96JG6 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC3.65□□□□□ -1.83
VPS50Q96JG6 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC3.65□□□□□ -1.83
VPS50Q96JG6 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
VPS50Q96JG6 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC3.65□□□□□ -1.83
VPS50Q96JG6 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
VPS50Q96JG6 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.64□□□□□ -1.83
VPS50Q96JG6 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
VPS50Q96JG6 CBX3P1-201ENST00000325243 554 ntBASIC3.64□□□□□ -1.83
VPS50Q96JG6 RNU6-1287P-201ENST00000362914 107 ntBASIC3.64□□□□□ -1.83
VPS50Q96JG6 RNU6-1060P-201ENST00000384664 107 ntBASIC3.64□□□□□ -1.83
VPS50Q96JG6 MIR449B-201ENST00000384995 97 ntBASIC3.64□□□□□ -1.83
VPS50Q96JG6 RNU6-550P-201ENST00000391057 101 ntBASIC3.64□□□□□ -1.83
VPS50Q96JG6 AL162578.1-201ENST00000406202 378 ntBASIC3.64□□□□□ -1.83
VPS50Q96JG6 AL606923.1-201ENST00000406616 190 ntBASIC3.64□□□□□ -1.83
VPS50Q96JG6 RAP1BP3-201ENST00000407180 549 ntBASIC3.64□□□□□ -1.83
VPS50Q96JG6 RNU6-193P-201ENST00000410977 107 ntBASIC3.64□□□□□ -1.83
VPS50Q96JG6 AC017079.2-201ENST00000416102 485 ntBASIC3.64□□□□□ -1.83
VPS50Q96JG6 AL591419.1-201ENST00000427423 339 ntBASIC3.64□□□□□ -1.83
VPS50Q96JG6 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.64□□□□□ -1.83
VPS50Q96JG6 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC3.64□□□□□ -1.83
VPS50Q96JG6 NOTCH2P1-201ENST00000443481 624 ntBASIC3.64□□□□□ -1.83
VPS50Q96JG6 CBWD4P-201ENST00000445695 655 ntBASIC3.64□□□□□ -1.83
VPS50Q96JG6 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC3.64□□□□□ -1.83
VPS50Q96JG6 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC3.64□□□□□ -1.83
VPS50Q96JG6 AC012181.1-201ENST00000479895 423 ntBASIC3.64□□□□□ -1.83
VPS50Q96JG6 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.64□□□□□ -1.83
VPS50Q96JG6 CCDC34P1-201ENST00000507441 517 ntBASIC3.64□□□□□ -1.83
VPS50Q96JG6 AC010486.1-201ENST00000511793 424 ntBASIC3.64□□□□□ -1.83
VPS50Q96JG6 AC010265.1-201ENST00000513509 211 ntBASIC3.64□□□□□ -1.83
VPS50Q96JG6 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC3.64□□□□□ -1.83
VPS50Q96JG6 AC008011.1-201ENST00000545989 227 ntBASIC3.64□□□□□ -1.83
VPS50Q96JG6 AL355836.1-201ENST00000555951 870 ntBASIC3.64□□□□□ -1.83
VPS50Q96JG6 AL118558.2-201ENST00000556294 238 ntBASIC3.64□□□□□ -1.83
VPS50Q96JG6 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC3.64□□□□□ -1.83
VPS50Q96JG6 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC3.64□□□□□ -1.83
VPS50Q96JG6 MIR4424-201ENST00000585257 86 ntBASIC3.64□□□□□ -1.83
VPS50Q96JG6 UBE2V2P2-201ENST00000587677 504 ntBASIC3.64□□□□□ -1.83
VPS50Q96JG6 AL158032.1-201ENST00000605401 106 ntBASIC3.64□□□□□ -1.83
VPS50Q96JG6 AC099778.2-201ENST00000610904 211 ntBASIC3.64□□□□□ -1.83
VPS50Q96JG6 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC3.64□□□□□ -1.83
VPS50Q96JG6 AC012409.4-201ENST00000612923 249 ntBASIC3.64□□□□□ -1.83
VPS50Q96JG6 AC063943.3-201ENST00000615562 356 ntBASIC3.64□□□□□ -1.83
VPS50Q96JG6 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.64□□□□□ -1.83
VPS50Q96JG6 AC104985.2-201ENST00000620598 500 ntBASIC3.64□□□□□ -1.83
VPS50Q96JG6 AC079684.1-201ENST00000621405 437 ntBASIC3.64□□□□□ -1.83
VPS50Q96JG6 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC3.64□□□□□ -1.83
VPS50Q96JG6 PWAR6-201ENST00000552334 4618 ntBASIC3.64□□□□□ -1.83
VPS50Q96JG6 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC3.64□□□□□ -1.83
VPS50Q96JG6 MTND4P35-201ENST00000604257 1375 ntBASIC3.63□□□□□ -1.83
VPS50Q96JG6 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC3.63□□□□□ -1.83
VPS50Q96JG6 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC3.63□□□□□ -1.83
VPS50Q96JG6 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.63□□□□□ -1.83
VPS50Q96JG6 AL137003.2-201ENST00000606924 2538 ntBASIC3.63□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 122.6 ms