Protein–RNA interactions for Protein: Q96CF2

CHMP4C, Charged multivesicular body protein 4c, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4CQ96CF2 AL359547.2-201ENST00000615810 418 ntBASIC4.19□□□□□ -1.74
CHMP4CQ96CF2 AC084757.4-201ENST00000616350 526 ntBASIC4.19□□□□□ -1.74
CHMP4CQ96CF2 uc_338.11-201ENST00000619132 160 ntBASIC4.19□□□□□ -1.74
CHMP4CQ96CF2 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC4.19□□□□□ -1.74
CHMP4CQ96CF2 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
CHMP4CQ96CF2 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC4.19□□□□□ -1.74
CHMP4CQ96CF2 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
CHMP4CQ96CF2 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
CHMP4CQ96CF2 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC4.18□□□□□ -1.74
CHMP4CQ96CF2 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
CHMP4CQ96CF2 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC4.18□□□□□ -1.74
CHMP4CQ96CF2 UBE2L2-201ENST00000254302 429 ntBASIC4.18□□□□□ -1.74
CHMP4CQ96CF2 FRG1CP-201ENST00000358464 769 ntBASIC4.18□□□□□ -1.74
CHMP4CQ96CF2 RNU4-35P-201ENST00000362588 141 ntBASIC4.18□□□□□ -1.74
CHMP4CQ96CF2 RNU6-1167P-201ENST00000363227 94 ntBASIC4.18□□□□□ -1.74
CHMP4CQ96CF2 RNU6-996P-201ENST00000365438 107 ntBASIC4.18□□□□□ -1.74
CHMP4CQ96CF2 RNU6-1029P-201ENST00000384109 107 ntBASIC4.18□□□□□ -1.74
CHMP4CQ96CF2 MIR1277-201ENST00000408536 78 ntBASIC4.18□□□□□ -1.74
CHMP4CQ96CF2 RNU6ATAC16P-201ENST00000408591 138 ntBASIC4.18□□□□□ -1.74
CHMP4CQ96CF2 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC4.18□□□□□ -1.74
CHMP4CQ96CF2 UBE2D3P2-201ENST00000424409 445 ntBASIC4.18□□□□□ -1.74
CHMP4CQ96CF2 CALM2P2-201ENST00000428512 440 ntBASIC4.18□□□□□ -1.74
CHMP4CQ96CF2 SETP5-201ENST00000437270 562 ntBASIC4.18□□□□□ -1.74
CHMP4CQ96CF2 AC016691.1-201ENST00000441321 413 ntBASIC4.18□□□□□ -1.74
CHMP4CQ96CF2 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC4.18□□□□□ -1.74
CHMP4CQ96CF2 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC4.18□□□□□ -1.74
CHMP4CQ96CF2 RPL21P10-201ENST00000463521 490 ntBASIC4.18□□□□□ -1.74
CHMP4CQ96CF2 AL160314.1-201ENST00000490836 438 ntBASIC4.18□□□□□ -1.74
CHMP4CQ96CF2 RPL30P5-201ENST00000494923 336 ntBASIC4.18□□□□□ -1.74
CHMP4CQ96CF2 AC104806.1-201ENST00000508720 308 ntBASIC4.18□□□□□ -1.74
CHMP4CQ96CF2 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC4.18□□□□□ -1.74
CHMP4CQ96CF2 Y_RNA.689-201ENST00000516589 107 ntBASIC4.18□□□□□ -1.74
CHMP4CQ96CF2 AP006245.1-201ENST00000522549 120 ntBASIC4.18□□□□□ -1.74
CHMP4CQ96CF2 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC4.18□□□□□ -1.74
CHMP4CQ96CF2 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC4.18□□□□□ -1.74
CHMP4CQ96CF2 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC4.18□□□□□ -1.74
CHMP4CQ96CF2 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC4.18□□□□□ -1.74
CHMP4CQ96CF2 SNORA59B-202ENST00000578183 701 ntBASIC4.18□□□□□ -1.74
CHMP4CQ96CF2 AC006504.3-201ENST00000586818 523 ntBASIC4.18□□□□□ -1.74
CHMP4CQ96CF2 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC4.18□□□□□ -1.74
CHMP4CQ96CF2 ATM-228ENST00000639240 498 ntTSL 5 BASIC4.18□□□□□ -1.74
CHMP4CQ96CF2 ATM-230ENST00000640388 578 ntTSL 5 BASIC4.18□□□□□ -1.74
CHMP4CQ96CF2 AL353746.1-201ENST00000566293 6881 ntBASIC4.18□□□□□ -1.74
CHMP4CQ96CF2 AC002546.1-201ENST00000588041 2504 ntBASIC4.18□□□□□ -1.74
CHMP4CQ96CF2 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC4.17□□□□□ -1.74
CHMP4CQ96CF2 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
CHMP4CQ96CF2 AC007785.2-201ENST00000598627 1916 ntBASIC4.17□□□□□ -1.74
CHMP4CQ96CF2 RNU6-1287P-201ENST00000362914 107 ntBASIC4.17□□□□□ -1.74
CHMP4CQ96CF2 SNORD115-7-201ENST00000365306 82 ntBASIC4.17□□□□□ -1.74
CHMP4CQ96CF2 SNORA69-201ENST00000383895 132 ntBASIC4.17□□□□□ -1.74
CHMP4CQ96CF2 RNU6-1060P-201ENST00000384664 107 ntBASIC4.17□□□□□ -1.74
CHMP4CQ96CF2 Y_RNA.576-201ENST00000384781 102 ntBASIC4.17□□□□□ -1.74
CHMP4CQ96CF2 FAT1P1-201ENST00000406588 507 ntBASIC4.17□□□□□ -1.74
CHMP4CQ96CF2 RN7SKP285-201ENST00000410137 318 ntBASIC4.17□□□□□ -1.74
CHMP4CQ96CF2 RNU2-33P-201ENST00000410344 192 ntBASIC4.17□□□□□ -1.74
CHMP4CQ96CF2 RNA5SP44-201ENST00000410446 133 ntBASIC4.17□□□□□ -1.74
CHMP4CQ96CF2 RN7SKP53-201ENST00000411337 315 ntBASIC4.17□□□□□ -1.74
CHMP4CQ96CF2 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC4.17□□□□□ -1.74
CHMP4CQ96CF2 RPS12P24-201ENST00000412619 387 ntBASIC4.17□□□□□ -1.74
CHMP4CQ96CF2 AC080125.1-201ENST00000414888 684 ntBASIC4.17□□□□□ -1.74
CHMP4CQ96CF2 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC4.17□□□□□ -1.74
CHMP4CQ96CF2 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC4.17□□□□□ -1.74
CHMP4CQ96CF2 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC4.17□□□□□ -1.74
CHMP4CQ96CF2 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC4.17□□□□□ -1.74
CHMP4CQ96CF2 AC092573.2-201ENST00000434546 243 ntBASIC4.17□□□□□ -1.74
CHMP4CQ96CF2 SEPT14P3-201ENST00000439401 183 ntBASIC4.17□□□□□ -1.74
CHMP4CQ96CF2 PIGFP3-201ENST00000441918 722 ntBASIC4.17□□□□□ -1.74
CHMP4CQ96CF2 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC4.17□□□□□ -1.74
CHMP4CQ96CF2 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC4.17□□□□□ -1.74
CHMP4CQ96CF2 AL732372.2-207ENST00000445840 183 ntBASIC4.17□□□□□ -1.74
CHMP4CQ96CF2 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC4.17□□□□□ -1.74
CHMP4CQ96CF2 SEPT14P2-201ENST00000453405 183 ntBASIC4.17□□□□□ -1.74
CHMP4CQ96CF2 SNRPGP3-201ENST00000469405 227 ntBASIC4.17□□□□□ -1.74
CHMP4CQ96CF2 AC233702.1-201ENST00000482905 502 ntBASIC4.17□□□□□ -1.74
CHMP4CQ96CF2 AL163973.1-201ENST00000484753 577 ntBASIC4.17□□□□□ -1.74
CHMP4CQ96CF2 MTAPP1-201ENST00000489154 819 ntBASIC4.17□□□□□ -1.74
CHMP4CQ96CF2 PCBP2P3-201ENST00000509726 843 ntBASIC4.17□□□□□ -1.74
CHMP4CQ96CF2 AC074250.1-201ENST00000511117 192 ntBASIC4.17□□□□□ -1.74
CHMP4CQ96CF2 SEPT14P4-201ENST00000513445 186 ntBASIC4.17□□□□□ -1.74
CHMP4CQ96CF2 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC4.17□□□□□ -1.74
CHMP4CQ96CF2 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC4.17□□□□□ -1.74
CHMP4CQ96CF2 FO082796.1-201ENST00000523795 183 ntBASIC4.17□□□□□ -1.74
CHMP4CQ96CF2 MTND1P35-201ENST00000526739 508 ntBASIC4.17□□□□□ -1.74
CHMP4CQ96CF2 AC026333.2-201ENST00000542164 106 ntBASIC4.17□□□□□ -1.74
CHMP4CQ96CF2 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC4.17□□□□□ -1.74
CHMP4CQ96CF2 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC4.17□□□□□ -1.74
CHMP4CQ96CF2 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC4.17□□□□□ -1.74
CHMP4CQ96CF2 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC4.17□□□□□ -1.74
CHMP4CQ96CF2 AC022893.3-201ENST00000607665 437 ntBASIC4.17□□□□□ -1.74
CHMP4CQ96CF2 AC007014.2-201ENST00000615581 479 ntBASIC4.17□□□□□ -1.74
CHMP4CQ96CF2 AC022149.2-201ENST00000621061 203 ntBASIC4.17□□□□□ -1.74
CHMP4CQ96CF2 AC011155.2-201ENST00000623202 216 ntBASIC4.17□□□□□ -1.74
CHMP4CQ96CF2 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC4.16□□□□□ -1.74
CHMP4CQ96CF2 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC4.16□□□□□ -1.74
CHMP4CQ96CF2 RNA5SP50-201ENST00000363731 107 ntBASIC4.16□□□□□ -1.74
CHMP4CQ96CF2 Y_RNA.248-201ENST00000364501 109 ntBASIC4.16□□□□□ -1.74
CHMP4CQ96CF2 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
CHMP4CQ96CF2 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC4.16□□□□□ -1.74
CHMP4CQ96CF2 AC092809.3-201ENST00000415453 231 ntBASIC4.16□□□□□ -1.74
CHMP4CQ96CF2 MRPS10P2-201ENST00000431226 381 ntBASIC4.16□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 103.9 ms