Protein–RNA interactions for Protein: Q95604

HLA-C, HLA class I histocompatibility antigen, Cw-17 alpha chain, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-CQ95604 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC5.44□□□□□ -1.54
HLA-CQ95604 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC5.44□□□□□ -1.54
HLA-CQ95604 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC5.44□□□□□ -1.54
HLA-CQ95604 Y_RNA.121-201ENST00000363309 113 ntBASIC5.44□□□□□ -1.54
HLA-CQ95604 RNU5F-3P-201ENST00000363767 117 ntBASIC5.44□□□□□ -1.54
HLA-CQ95604 Y_RNA.215-201ENST00000364204 112 ntBASIC5.44□□□□□ -1.54
HLA-CQ95604 RNU6-213P-201ENST00000384051 104 ntBASIC5.44□□□□□ -1.54
HLA-CQ95604 SNORA66-201ENST00000384792 133 ntBASIC5.44□□□□□ -1.54
HLA-CQ95604 SNORA57.1-201ENST00000391227 145 ntBASIC5.44□□□□□ -1.54
HLA-CQ95604 MTHFD2P2-201ENST00000407725 247 ntBASIC5.44□□□□□ -1.54
HLA-CQ95604 AL590383.1-201ENST00000428602 75 ntBASIC5.44□□□□□ -1.54
HLA-CQ95604 MRPS10P1-201ENST00000448483 130 ntBASIC5.44□□□□□ -1.54
HLA-CQ95604 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC5.44□□□□□ -1.54
HLA-CQ95604 AC005042.3-201ENST00000453230 174 ntBASIC5.44□□□□□ -1.54
HLA-CQ95604 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC5.44□□□□□ -1.54
HLA-CQ95604 AP004607.1-201ENST00000524456 203 ntBASIC5.44□□□□□ -1.54
HLA-CQ95604 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC5.44□□□□□ -1.54
HLA-CQ95604 MIR3160-1-201ENST00000577972 85 ntBASIC5.44□□□□□ -1.54
HLA-CQ95604 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC5.44□□□□□ -1.54
HLA-CQ95604 AC005176.2-201ENST00000596933 147 ntBASIC5.44□□□□□ -1.54
HLA-CQ95604 AC131238.1-201ENST00000617135 328 ntBASIC5.44□□□□□ -1.54
HLA-CQ95604 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC5.44□□□□□ -1.54
HLA-CQ95604 AC138965.3-201ENST00000623875 498 ntBASIC5.44□□□□□ -1.54
HLA-CQ95604 AC241585.2-209ENST00000638217 143 ntBASIC5.44□□□□□ -1.54
HLA-CQ95604 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC5.44□□□□□ -1.54
HLA-CQ95604 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC5.44□□□□□ -1.54
HLA-CQ95604 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC5.44□□□□□ -1.54
HLA-CQ95604 NBEA-207ENST00000537702 4089 ntTSL 2 BASIC5.44□□□□□ -1.54
HLA-CQ95604 AL592437.2-201ENST00000421655 2434 ntBASIC5.44□□□□□ -1.54
HLA-CQ95604 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
HLA-CQ95604 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
HLA-CQ95604 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
HLA-CQ95604 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC5.43□□□□□ -1.54
HLA-CQ95604 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC5.43□□□□□ -1.54
HLA-CQ95604 AP002004.1-201ENST00000532510 3530 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
HLA-CQ95604 AC239868.2-201ENST00000564237 4527 ntBASIC5.43□□□□□ -1.54
HLA-CQ95604 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
HLA-CQ95604 OR4F13P-202ENST00000560066 2054 ntBASIC5.43□□□□□ -1.54
HLA-CQ95604 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC5.43□□□□□ -1.54
HLA-CQ95604 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
HLA-CQ95604 SNORD115-8-201ENST00000363856 82 ntBASIC5.43□□□□□ -1.54
HLA-CQ95604 SNORD115-38-201ENST00000365037 82 ntBASIC5.43□□□□□ -1.54
HLA-CQ95604 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
HLA-CQ95604 MIR329-1-201ENST00000385028 80 ntBASIC5.43□□□□□ -1.54
HLA-CQ95604 RNU11-201ENST00000387069 134 ntBASIC5.43□□□□□ -1.54
HLA-CQ95604 RNU6-159P-201ENST00000391080 106 ntBASIC5.43□□□□□ -1.54
HLA-CQ95604 U3.37-201ENST00000408528 213 ntBASIC5.43□□□□□ -1.54
HLA-CQ95604 WARS2P1-201ENST00000429678 537 ntBASIC5.43□□□□□ -1.54
HLA-CQ95604 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC5.43□□□□□ -1.54
HLA-CQ95604 TEX41-209ENST00000451478 452 ntTSL 2 BASIC5.43□□□□□ -1.54
HLA-CQ95604 RNU4ATAC15P-201ENST00000516415 126 ntBASIC5.43□□□□□ -1.54
HLA-CQ95604 AC055872.1-201ENST00000570978 278 ntBASIC5.43□□□□□ -1.54
HLA-CQ95604 MIR4715-201ENST00000584117 79 ntBASIC5.43□□□□□ -1.54
HLA-CQ95604 AL360012.1-201ENST00000602813 131 ntBASIC5.43□□□□□ -1.54
HLA-CQ95604 MIR92B-201ENST00000607575 96 ntBASIC5.43□□□□□ -1.54
HLA-CQ95604 AL365222.1-201ENST00000614661 98 ntBASIC5.43□□□□□ -1.54
HLA-CQ95604 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC5.43□□□□□ -1.54
HLA-CQ95604 MAGI2-235ENST00000637282 3174 ntTSL 5 BASIC5.43□□□□□ -1.54
HLA-CQ95604 AL450326.2-201ENST00000421913 1962 ntBASIC5.43□□□□□ -1.54
HLA-CQ95604 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC5.43□□□□□ -1.54
HLA-CQ95604 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC5.43□□□□□ -1.54
HLA-CQ95604 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC5.43□□□□□ -1.54
HLA-CQ95604 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
HLA-CQ95604 WASHC4-214ENST00000620430 5807 ntAPPRIS ALT1 TSL 1 (best) BASIC5.43□□□□□ -1.54
HLA-CQ95604 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
HLA-CQ95604 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
HLA-CQ95604 RAB9B-201ENST00000243298 3748 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
HLA-CQ95604 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
HLA-CQ95604 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
HLA-CQ95604 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
HLA-CQ95604 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC5.42□□□□□ -1.54
HLA-CQ95604 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
HLA-CQ95604 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
HLA-CQ95604 SMG1P4-204ENST00000523028 4131 ntBASIC5.42□□□□□ -1.54
HLA-CQ95604 Y_RNA.7-201ENST00000362352 102 ntBASIC5.42□□□□□ -1.54
HLA-CQ95604 RNA5SP191-201ENST00000362585 102 ntBASIC5.42□□□□□ -1.54
HLA-CQ95604 RNU6-527P-201ENST00000363425 104 ntBASIC5.42□□□□□ -1.54
HLA-CQ95604 RNA5SP205-201ENST00000364653 136 ntBASIC5.42□□□□□ -1.54
HLA-CQ95604 RNA5SP90-201ENST00000364801 99 ntBASIC5.42□□□□□ -1.54
HLA-CQ95604 RNU1-136P-201ENST00000384181 164 ntBASIC5.42□□□□□ -1.54
HLA-CQ95604 RNU6-1245P-201ENST00000411130 106 ntBASIC5.42□□□□□ -1.54
HLA-CQ95604 RN7SKP100-201ENST00000411258 284 ntBASIC5.42□□□□□ -1.54
HLA-CQ95604 ELOCP19-201ENST00000411919 318 ntBASIC5.42□□□□□ -1.54
HLA-CQ95604 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC5.42□□□□□ -1.54
HLA-CQ95604 AL589765.3-201ENST00000446084 462 ntBASIC5.42□□□□□ -1.54
HLA-CQ95604 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC5.42□□□□□ -1.54
HLA-CQ95604 SSXP4-201ENST00000451349 245 ntBASIC5.42□□□□□ -1.54
HLA-CQ95604 AC022795.1-201ENST00000473808 480 ntBASIC5.42□□□□□ -1.54
HLA-CQ95604 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC5.42□□□□□ -1.54
HLA-CQ95604 SNORA43.2-201ENST00000516652 128 ntBASIC5.42□□□□□ -1.54
HLA-CQ95604 RNA5SP165-201ENST00000517142 115 ntBASIC5.42□□□□□ -1.54
HLA-CQ95604 CYCSP23-201ENST00000519781 313 ntBASIC5.42□□□□□ -1.54
HLA-CQ95604 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC5.42□□□□□ -1.54
HLA-CQ95604 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC5.42□□□□□ -1.54
HLA-CQ95604 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC5.42□□□□□ -1.54
HLA-CQ95604 AL391261.3-201ENST00000557194 520 ntBASIC5.42□□□□□ -1.54
HLA-CQ95604 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC5.42□□□□□ -1.54
HLA-CQ95604 ZNF192P1-203ENST00000565888 810 ntBASIC5.42□□□□□ -1.54
HLA-CQ95604 MIR3684-201ENST00000579779 74 ntBASIC5.42□□□□□ -1.54
HLA-CQ95604 KLKP1-201ENST00000595979 403 ntBASIC5.42□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms