Protein–RNA interactions for Protein: Q8TD31

CCHCR1, Coiled-coil alpha-helical rod protein 1, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1Q8TD31 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC3.99□□□□□ -1.77
CCHCR1Q8TD31 AC048347.1-201ENST00000624621 427 ntBASIC3.99□□□□□ -1.77
CCHCR1Q8TD31 RNA5SP196-201ENST00000625967 102 ntBASIC3.99□□□□□ -1.77
CCHCR1Q8TD31 MIR7153-201ENST00000637758 57 ntBASIC3.99□□□□□ -1.77
CCHCR1Q8TD31 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
CCHCR1Q8TD31 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.99□□□□□ -1.77
CCHCR1Q8TD31 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
CCHCR1Q8TD31 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC3.98□□□□□ -1.77
CCHCR1Q8TD31 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
CCHCR1Q8TD31 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
CCHCR1Q8TD31 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
CCHCR1Q8TD31 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
CCHCR1Q8TD31 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
CCHCR1Q8TD31 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
CCHCR1Q8TD31 MIR372-201ENST00000362225 67 ntBASIC3.98□□□□□ -1.77
CCHCR1Q8TD31 Y_RNA.184-201ENST00000363884 108 ntBASIC3.98□□□□□ -1.77
CCHCR1Q8TD31 RNA5SP189-201ENST00000364920 115 ntBASIC3.98□□□□□ -1.77
CCHCR1Q8TD31 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
CCHCR1Q8TD31 Y_RNA.414-201ENST00000384011 101 ntBASIC3.98□□□□□ -1.77
CCHCR1Q8TD31 U1.1-201ENST00000384101 164 ntBASIC3.98□□□□□ -1.77
CCHCR1Q8TD31 HSPE1P26-201ENST00000405341 275 ntBASIC3.98□□□□□ -1.77
CCHCR1Q8TD31 AL591704.1-201ENST00000432574 275 ntBASIC3.98□□□□□ -1.77
CCHCR1Q8TD31 HMGB1P18-201ENST00000438801 619 ntBASIC3.98□□□□□ -1.77
CCHCR1Q8TD31 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC3.98□□□□□ -1.77
CCHCR1Q8TD31 AC084198.1-201ENST00000477747 402 ntBASIC3.98□□□□□ -1.77
CCHCR1Q8TD31 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC3.98□□□□□ -1.77
CCHCR1Q8TD31 AC083904.1-201ENST00000487828 231 ntBASIC3.98□□□□□ -1.77
CCHCR1Q8TD31 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC3.98□□□□□ -1.77
CCHCR1Q8TD31 AC026784.1-201ENST00000507986 352 ntBASIC3.98□□□□□ -1.77
CCHCR1Q8TD31 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC3.98□□□□□ -1.77
CCHCR1Q8TD31 MEPE-206ENST00000511670 550 ntTSL 4 BASIC3.98□□□□□ -1.77
CCHCR1Q8TD31 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC3.98□□□□□ -1.77
CCHCR1Q8TD31 RNA5SP179-201ENST00000517284 121 ntBASIC3.98□□□□□ -1.77
CCHCR1Q8TD31 AP001804.3-201ENST00000525146 880 ntBASIC3.98□□□□□ -1.77
CCHCR1Q8TD31 SNRPGP16-201ENST00000533275 226 ntBASIC3.98□□□□□ -1.77
CCHCR1Q8TD31 AC093027.1-201ENST00000546698 429 ntBASIC3.98□□□□□ -1.77
CCHCR1Q8TD31 YPEL5P3-201ENST00000547227 352 ntBASIC3.98□□□□□ -1.77
CCHCR1Q8TD31 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC3.98□□□□□ -1.77
CCHCR1Q8TD31 AC005668.1-201ENST00000571142 476 ntBASIC3.98□□□□□ -1.77
CCHCR1Q8TD31 AC120057.2-201ENST00000571520 271 ntBASIC3.98□□□□□ -1.77
CCHCR1Q8TD31 MIR4425-201ENST00000580572 84 ntBASIC3.98□□□□□ -1.77
CCHCR1Q8TD31 MIR4286-201ENST00000580651 93 ntBASIC3.98□□□□□ -1.77
CCHCR1Q8TD31 AC005498.1-201ENST00000592125 465 ntBASIC3.98□□□□□ -1.77
CCHCR1Q8TD31 AL606490.9-201ENST00000603331 271 ntBASIC3.98□□□□□ -1.77
CCHCR1Q8TD31 AL592436.1-201ENST00000605135 558 ntBASIC3.98□□□□□ -1.77
CCHCR1Q8TD31 AL670379.4-201ENST00000605279 254 ntBASIC3.98□□□□□ -1.77
CCHCR1Q8TD31 CTHRC1P1-201ENST00000605383 469 ntBASIC3.98□□□□□ -1.77
CCHCR1Q8TD31 AC135507.2-201ENST00000612443 309 ntBASIC3.98□□□□□ -1.77
CCHCR1Q8TD31 RMST_7.1-201ENST00000621935 268 ntBASIC3.98□□□□□ -1.77
CCHCR1Q8TD31 MIR6500-201ENST00000622700 86 ntBASIC3.98□□□□□ -1.77
CCHCR1Q8TD31 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC3.98□□□□□ -1.77
CCHCR1Q8TD31 AC006504.1-201ENST00000562493 3666 ntBASIC3.98□□□□□ -1.77
CCHCR1Q8TD31 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.98□□□□□ -1.77
CCHCR1Q8TD31 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
CCHCR1Q8TD31 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.98□□□□□ -1.77
CCHCR1Q8TD31 OTUD4P1-201ENST00000237841 3067 ntBASIC3.98□□□□□ -1.77
CCHCR1Q8TD31 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
CCHCR1Q8TD31 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.98□□□□□ -1.77
CCHCR1Q8TD31 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
CCHCR1Q8TD31 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
CCHCR1Q8TD31 AP001350.1-201ENST00000601906 1524 ntBASIC3.97□□□□□ -1.77
CCHCR1Q8TD31 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
CCHCR1Q8TD31 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.97□□□□□ -1.77
CCHCR1Q8TD31 RNU5A-1-201ENST00000362698 116 ntBASIC3.97□□□□□ -1.77
CCHCR1Q8TD31 SNORA7.2-201ENST00000364446 145 ntBASIC3.97□□□□□ -1.77
CCHCR1Q8TD31 Y_RNA.301-201ENST00000364990 103 ntBASIC3.97□□□□□ -1.77
CCHCR1Q8TD31 RNA5SP97-201ENST00000365006 84 ntBASIC3.97□□□□□ -1.77
CCHCR1Q8TD31 RNA5SP283-201ENST00000365604 119 ntBASIC3.97□□□□□ -1.77
CCHCR1Q8TD31 Y_RNA.399-201ENST00000383955 105 ntBASIC3.97□□□□□ -1.77
CCHCR1Q8TD31 RNU6-1181P-201ENST00000384191 106 ntBASIC3.97□□□□□ -1.77
CCHCR1Q8TD31 AL139397.2-201ENST00000404529 772 ntBASIC3.97□□□□□ -1.77
CCHCR1Q8TD31 PPIAP31-201ENST00000405422 495 ntBASIC3.97□□□□□ -1.77
CCHCR1Q8TD31 POLHP1-201ENST00000411806 470 ntBASIC3.97□□□□□ -1.77
CCHCR1Q8TD31 AL513331.1-201ENST00000411908 397 ntBASIC3.97□□□□□ -1.77
CCHCR1Q8TD31 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC3.97□□□□□ -1.77
CCHCR1Q8TD31 TRBV1-201ENST00000476502 284 ntBASIC3.97□□□□□ -1.77
CCHCR1Q8TD31 RN7SL132P-201ENST00000478131 296 ntBASIC3.97□□□□□ -1.77
CCHCR1Q8TD31 AL049830.2-201ENST00000480072 201 ntBASIC3.97□□□□□ -1.77
CCHCR1Q8TD31 RNU6-864P-201ENST00000516256 108 ntBASIC3.97□□□□□ -1.77
CCHCR1Q8TD31 RN7SKP21-201ENST00000516503 220 ntBASIC3.97□□□□□ -1.77
CCHCR1Q8TD31 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC3.97□□□□□ -1.77
CCHCR1Q8TD31 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC3.97□□□□□ -1.77
CCHCR1Q8TD31 MTCO3P23-201ENST00000561363 289 ntBASIC3.97□□□□□ -1.77
CCHCR1Q8TD31 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC3.97□□□□□ -1.77
CCHCR1Q8TD31 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.97□□□□□ -1.77
CCHCR1Q8TD31 AC044792.1-201ENST00000593294 196 ntBASIC3.97□□□□□ -1.77
CCHCR1Q8TD31 AC091167.4-201ENST00000605079 184 ntBASIC3.97□□□□□ -1.77
CCHCR1Q8TD31 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
CCHCR1Q8TD31 AL355810.1-201ENST00000614629 552 ntBASIC3.97□□□□□ -1.77
CCHCR1Q8TD31 AC034102.8-201ENST00000615146 484 ntBASIC3.97□□□□□ -1.77
CCHCR1Q8TD31 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
CCHCR1Q8TD31 AC103705.1-201ENST00000619013 241 ntBASIC3.97□□□□□ -1.77
CCHCR1Q8TD31 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC3.97□□□□□ -1.77
CCHCR1Q8TD31 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC3.97□□□□□ -1.77
CCHCR1Q8TD31 AC099654.10-201ENST00000640395 161 ntBASIC3.97□□□□□ -1.77
CCHCR1Q8TD31 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
CCHCR1Q8TD31 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.97□□□□□ -1.77
CCHCR1Q8TD31 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
CCHCR1Q8TD31 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
CCHCR1Q8TD31 AL021368.2-201ENST00000606125 5352 ntBASIC3.97□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 99.9 ms