Protein–RNA interactions for Protein: Q8NFU0

BEST4, Bestrophin-4, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST4Q8NFU0 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC2.52□□□□□ -2.01
BEST4Q8NFU0 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC2.52□□□□□ -2.01
BEST4Q8NFU0 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC2.52□□□□□ -2.01
BEST4Q8NFU0 AC034105.3-201ENST00000565294 442 ntBASIC2.52□□□□□ -2.01
BEST4Q8NFU0 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC2.52□□□□□ -2.01
BEST4Q8NFU0 MIR3609-201ENST00000582661 80 ntBASIC2.52□□□□□ -2.01
BEST4Q8NFU0 MIR3670-2-201ENST00000582974 65 ntBASIC2.52□□□□□ -2.01
BEST4Q8NFU0 MIR3670-1-201ENST00000584160 65 ntBASIC2.52□□□□□ -2.01
BEST4Q8NFU0 MIR3670-3-201ENST00000584855 65 ntBASIC2.52□□□□□ -2.01
BEST4Q8NFU0 HMGN2P15-201ENST00000585707 270 ntBASIC2.52□□□□□ -2.01
BEST4Q8NFU0 AC087683.1-201ENST00000591187 441 ntBASIC2.52□□□□□ -2.01
BEST4Q8NFU0 DEFB131E-202ENST00000602581 683 ntBASIC2.52□□□□□ -2.01
BEST4Q8NFU0 AC024220.1-201ENST00000603675 484 ntBASIC2.52□□□□□ -2.01
BEST4Q8NFU0 AC091805.2-201ENST00000603848 235 ntBASIC2.52□□□□□ -2.01
BEST4Q8NFU0 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC2.52□□□□□ -2.01
BEST4Q8NFU0 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC2.52□□□□□ -2.01
BEST4Q8NFU0 MIR3670-4-201ENST00000612260 65 ntBASIC2.52□□□□□ -2.01
BEST4Q8NFU0 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC2.52□□□□□ -2.01
BEST4Q8NFU0 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
BEST4Q8NFU0 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC2.52□□□□□ -2.01
BEST4Q8NFU0 Z99571.1-201ENST00000636677 394 ntBASIC2.52□□□□□ -2.01
BEST4Q8NFU0 MIR622-201ENST00000638396 96 ntBASIC2.52□□□□□ -2.01
BEST4Q8NFU0 CKAP2P1-201ENST00000555477 2049 ntBASIC2.52□□□□□ -2.01
BEST4Q8NFU0 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.52□□□□□ -2.01
BEST4Q8NFU0 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC2.51□□□□□ -2.01
BEST4Q8NFU0 SDAD1P2-201ENST00000441308 2028 ntBASIC2.51□□□□□ -2.01
BEST4Q8NFU0 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC2.51□□□□□ -2.01
BEST4Q8NFU0 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
BEST4Q8NFU0 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
BEST4Q8NFU0 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
BEST4Q8NFU0 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
BEST4Q8NFU0 RNU1-35P-201ENST00000362782 153 ntBASIC2.51□□□□□ -2.01
BEST4Q8NFU0 RNU1-33P-201ENST00000364249 162 ntBASIC2.51□□□□□ -2.01
BEST4Q8NFU0 RNU6-741P-201ENST00000383889 107 ntBASIC2.51□□□□□ -2.01
BEST4Q8NFU0 Y_RNA.409-201ENST00000383990 98 ntBASIC2.51□□□□□ -2.01
BEST4Q8NFU0 MIR490-201ENST00000384865 128 ntBASIC2.51□□□□□ -2.01
BEST4Q8NFU0 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
BEST4Q8NFU0 AL139039.1-201ENST00000401900 692 ntBASIC2.51□□□□□ -2.01
BEST4Q8NFU0 RN7SKP202-201ENST00000410439 330 ntBASIC2.51□□□□□ -2.01
BEST4Q8NFU0 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
BEST4Q8NFU0 MTND3P17-201ENST00000416968 344 ntBASIC2.51□□□□□ -2.01
BEST4Q8NFU0 ATG3P1-201ENST00000419507 911 ntBASIC2.51□□□□□ -2.01
BEST4Q8NFU0 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC2.51□□□□□ -2.01
BEST4Q8NFU0 CALM2P2-201ENST00000428512 440 ntBASIC2.51□□□□□ -2.01
BEST4Q8NFU0 C8orf59P1-201ENST00000429930 303 ntBASIC2.51□□□□□ -2.01
BEST4Q8NFU0 AC018644.1-201ENST00000429934 551 ntBASIC2.51□□□□□ -2.01
BEST4Q8NFU0 RPS24P1-201ENST00000438550 371 ntBASIC2.51□□□□□ -2.01
BEST4Q8NFU0 HMGB3P12-201ENST00000438745 556 ntBASIC2.51□□□□□ -2.01
BEST4Q8NFU0 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC2.51□□□□□ -2.01
BEST4Q8NFU0 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC2.51□□□□□ -2.01
BEST4Q8NFU0 H2AFZP6-201ENST00000444403 394 ntBASIC2.51□□□□□ -2.01
BEST4Q8NFU0 PRDX3P3-201ENST00000447765 522 ntBASIC2.51□□□□□ -2.01
BEST4Q8NFU0 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC2.51□□□□□ -2.01
BEST4Q8NFU0 AP000705.1-201ENST00000454567 350 ntBASIC2.51□□□□□ -2.01
BEST4Q8NFU0 C1DP4-201ENST00000455429 424 ntBASIC2.51□□□□□ -2.01
BEST4Q8NFU0 SNORD97-201ENST00000459187 142 ntBASIC2.51□□□□□ -2.01
BEST4Q8NFU0 AC109925.1-201ENST00000478069 331 ntBASIC2.51□□□□□ -2.01
BEST4Q8NFU0 AC103975.1-201ENST00000482506 483 ntBASIC2.51□□□□□ -2.01
BEST4Q8NFU0 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC2.51□□□□□ -2.01
BEST4Q8NFU0 SUMO2P6-201ENST00000505273 288 ntBASIC2.51□□□□□ -2.01
BEST4Q8NFU0 HSPD1P15-201ENST00000505573 1122 ntBASIC2.51□□□□□ -2.01
BEST4Q8NFU0 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
BEST4Q8NFU0 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC2.51□□□□□ -2.01
BEST4Q8NFU0 AC108078.2-201ENST00000510750 236 ntBASIC2.51□□□□□ -2.01
BEST4Q8NFU0 PANCR-202ENST00000513690 448 ntTSL 2 BASIC2.51□□□□□ -2.01
BEST4Q8NFU0 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC2.51□□□□□ -2.01
BEST4Q8NFU0 RN7SKP298-201ENST00000515950 94 ntBASIC2.51□□□□□ -2.01
BEST4Q8NFU0 RNU6-927P-201ENST00000516199 100 ntBASIC2.51□□□□□ -2.01
BEST4Q8NFU0 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC2.51□□□□□ -2.01
BEST4Q8NFU0 AC011979.2-201ENST00000527568 352 ntBASIC2.51□□□□□ -2.01
BEST4Q8NFU0 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
BEST4Q8NFU0 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC2.51□□□□□ -2.01
BEST4Q8NFU0 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC2.51□□□□□ -2.01
BEST4Q8NFU0 MTCYBP33-201ENST00000575007 1130 ntBASIC2.51□□□□□ -2.01
BEST4Q8NFU0 AC024619.4-201ENST00000580924 316 ntBASIC2.51□□□□□ -2.01
BEST4Q8NFU0 MIR3682-201ENST00000581338 84 ntBASIC2.51□□□□□ -2.01
BEST4Q8NFU0 AC098848.2-201ENST00000588023 330 ntBASIC2.51□□□□□ -2.01
BEST4Q8NFU0 AL022154.1-201ENST00000604698 785 ntBASIC2.51□□□□□ -2.01
BEST4Q8NFU0 AC022893.3-201ENST00000607665 437 ntBASIC2.51□□□□□ -2.01
BEST4Q8NFU0 CR392039.5-201ENST00000623201 510 ntBASIC2.51□□□□□ -2.01
BEST4Q8NFU0 AC093648.1-201ENST00000623546 606 ntBASIC2.51□□□□□ -2.01
BEST4Q8NFU0 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC2.51□□□□□ -2.01
BEST4Q8NFU0 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.51□□□□□ -2.01
BEST4Q8NFU0 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC2.51□□□□□ -2.01
BEST4Q8NFU0 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC2.51□□□□□ -2.01
BEST4Q8NFU0 SNORA62.1-201ENST00000364287 154 ntBASIC2.5□□□□□ -2.01
BEST4Q8NFU0 SNORA4.3-201ENST00000365564 137 ntBASIC2.5□□□□□ -2.01
BEST4Q8NFU0 RNU6-198P-201ENST00000384258 104 ntBASIC2.5□□□□□ -2.01
BEST4Q8NFU0 Y_RNA.517-201ENST00000384551 106 ntBASIC2.5□□□□□ -2.01
BEST4Q8NFU0 SNORA1.3-201ENST00000384676 136 ntBASIC2.5□□□□□ -2.01
BEST4Q8NFU0 CISD1P1-201ENST00000393907 327 ntBASIC2.5□□□□□ -2.01
BEST4Q8NFU0 RPL21P75-201ENST00000396599 483 ntBASIC2.5□□□□□ -2.01
BEST4Q8NFU0 RPL21P28-201ENST00000401418 483 ntBASIC2.5□□□□□ -2.01
BEST4Q8NFU0 AL592114.1-201ENST00000403842 483 ntBASIC2.5□□□□□ -2.01
BEST4Q8NFU0 RPS12P24-201ENST00000412619 387 ntBASIC2.5□□□□□ -2.01
BEST4Q8NFU0 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC2.5□□□□□ -2.01
BEST4Q8NFU0 AC016769.2-201ENST00000414815 475 ntBASIC2.5□□□□□ -2.01
BEST4Q8NFU0 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC2.5□□□□□ -2.01
BEST4Q8NFU0 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC2.5□□□□□ -2.01
BEST4Q8NFU0 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 98.8 ms