Protein–RNA interactions for Protein: Q8NCR9

CLRN3, Clarin-3, humanhuman

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN3Q8NCR9 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC3.71□□□□□ -1.82
CLRN3Q8NCR9 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
CLRN3Q8NCR9 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC3.71□□□□□ -1.82
CLRN3Q8NCR9 RPL9P7-201ENST00000330965 580 ntBASIC3.71□□□□□ -1.82
CLRN3Q8NCR9 RNA5SP46-201ENST00000362370 120 ntBASIC3.71□□□□□ -1.82
CLRN3Q8NCR9 RNA5SP388-201ENST00000362584 119 ntBASIC3.71□□□□□ -1.82
CLRN3Q8NCR9 Y_RNA.128-201ENST00000363391 112 ntBASIC3.71□□□□□ -1.82
CLRN3Q8NCR9 RN7SKP160-201ENST00000363804 340 ntBASIC3.71□□□□□ -1.82
CLRN3Q8NCR9 SNORD6-201ENST00000365444 73 ntBASIC3.71□□□□□ -1.82
CLRN3Q8NCR9 SNORD42.2-201ENST00000365570 69 ntBASIC3.71□□□□□ -1.82
CLRN3Q8NCR9 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC3.71□□□□□ -1.82
CLRN3Q8NCR9 SNORA70.10-201ENST00000384515 134 ntBASIC3.71□□□□□ -1.82
CLRN3Q8NCR9 ARL4AP5-201ENST00000404372 599 ntBASIC3.71□□□□□ -1.82
CLRN3Q8NCR9 SYCE3-202ENST00000406915 448 ntAPPRIS P1 TSL 2 BASIC3.71□□□□□ -1.82
CLRN3Q8NCR9 SNORA77-201ENST00000408716 125 ntBASIC3.71□□□□□ -1.82
CLRN3Q8NCR9 RPS3P2-201ENST00000421346 701 ntBASIC3.71□□□□□ -1.82
CLRN3Q8NCR9 BPY2DP-201ENST00000422208 265 ntBASIC3.71□□□□□ -1.82
CLRN3Q8NCR9 BX323845.3-201ENST00000428215 527 ntBASIC3.71□□□□□ -1.82
CLRN3Q8NCR9 USP9YP30-201ENST00000430729 455 ntBASIC3.71□□□□□ -1.82
CLRN3Q8NCR9 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC3.71□□□□□ -1.82
CLRN3Q8NCR9 AL133396.1-201ENST00000432048 687 ntBASIC3.71□□□□□ -1.82
CLRN3Q8NCR9 AL513043.1-201ENST00000439124 535 ntBASIC3.71□□□□□ -1.82
CLRN3Q8NCR9 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC3.71□□□□□ -1.82
CLRN3Q8NCR9 AC105399.1-202ENST00000447303 205 ntBASIC3.71□□□□□ -1.82
CLRN3Q8NCR9 HMGN2P10-201ENST00000448085 265 ntBASIC3.71□□□□□ -1.82
CLRN3Q8NCR9 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC3.71□□□□□ -1.82
CLRN3Q8NCR9 RPL9P9-202ENST00000466501 579 ntBASIC3.71□□□□□ -1.82
CLRN3Q8NCR9 AP002884.2-201ENST00000471647 395 ntBASIC3.71□□□□□ -1.82
CLRN3Q8NCR9 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC3.71□□□□□ -1.82
CLRN3Q8NCR9 SNORA70.14-201ENST00000516205 110 ntBASIC3.71□□□□□ -1.82
CLRN3Q8NCR9 SCARNA21.2-201ENST00000516600 166 ntBASIC3.71□□□□□ -1.82
CLRN3Q8NCR9 AP000676.2-201ENST00000529711 301 ntBASIC3.71□□□□□ -1.82
CLRN3Q8NCR9 AC009643.1-201ENST00000532030 391 ntBASIC3.71□□□□□ -1.82
CLRN3Q8NCR9 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC3.71□□□□□ -1.82
CLRN3Q8NCR9 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC3.71□□□□□ -1.82
CLRN3Q8NCR9 AL451007.1-201ENST00000595491 289 ntBASIC3.71□□□□□ -1.82
CLRN3Q8NCR9 AC011494.1-201ENST00000596454 237 ntBASIC3.71□□□□□ -1.82
CLRN3Q8NCR9 AC024153.1-201ENST00000603103 365 ntBASIC3.71□□□□□ -1.82
CLRN3Q8NCR9 AL080274.1-201ENST00000605565 220 ntBASIC3.71□□□□□ -1.82
CLRN3Q8NCR9 MIR486-1-201ENST00000612171 68 ntBASIC3.71□□□□□ -1.82
CLRN3Q8NCR9 AL391261.4-201ENST00000616012 481 ntBASIC3.71□□□□□ -1.82
CLRN3Q8NCR9 SMCR2_2.1-201ENST00000619783 161 ntBASIC3.71□□□□□ -1.82
CLRN3Q8NCR9 U7.8-201ENST00000619968 63 ntBASIC3.71□□□□□ -1.82
CLRN3Q8NCR9 AC135068.12-201ENST00000637370 931 ntBASIC3.71□□□□□ -1.82
CLRN3Q8NCR9 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC3.71□□□□□ -1.82
CLRN3Q8NCR9 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC3.71□□□□□ -1.82
CLRN3Q8NCR9 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
CLRN3Q8NCR9 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
CLRN3Q8NCR9 CDC27P3-201ENST00000635418 1910 ntBASIC3.71□□□□□ -1.82
CLRN3Q8NCR9 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
CLRN3Q8NCR9 AC066616.2-201ENST00000559334 1481 ntBASIC3.71□□□□□ -1.82
CLRN3Q8NCR9 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC3.71□□□□□ -1.82
CLRN3Q8NCR9 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.71□□□□□ -1.82
CLRN3Q8NCR9 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC3.71□□□□□ -1.82
CLRN3Q8NCR9 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC3.7□□□□□ -1.82
CLRN3Q8NCR9 ADAM3A-203ENST00000461344 2157 ntBASIC3.7□□□□□ -1.82
CLRN3Q8NCR9 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
CLRN3Q8NCR9 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
CLRN3Q8NCR9 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.7□□□□□ -1.82
CLRN3Q8NCR9 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
CLRN3Q8NCR9 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC3.7□□□□□ -1.82
CLRN3Q8NCR9 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
CLRN3Q8NCR9 RNA5SP515-201ENST00000364570 118 ntBASIC3.7□□□□□ -1.82
CLRN3Q8NCR9 HEATR1-201ENST00000366579 793 ntTSL 2 BASIC3.7□□□□□ -1.82
CLRN3Q8NCR9 RNA5SP122-201ENST00000384457 108 ntBASIC3.7□□□□□ -1.82
CLRN3Q8NCR9 HMGB1P20-201ENST00000402555 677 ntBASIC3.7□□□□□ -1.82
CLRN3Q8NCR9 AL513475.1-201ENST00000406602 315 ntBASIC3.7□□□□□ -1.82
CLRN3Q8NCR9 Y_RNA.646-201ENST00000410980 101 ntBASIC3.7□□□□□ -1.82
CLRN3Q8NCR9 RPL23AP26-201ENST00000412728 464 ntBASIC3.7□□□□□ -1.82
CLRN3Q8NCR9 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC3.7□□□□□ -1.82
CLRN3Q8NCR9 USMG5P1-201ENST00000425964 177 ntBASIC3.7□□□□□ -1.82
CLRN3Q8NCR9 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC3.7□□□□□ -1.82
CLRN3Q8NCR9 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC3.7□□□□□ -1.82
CLRN3Q8NCR9 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC3.7□□□□□ -1.82
CLRN3Q8NCR9 HMGN2P20-201ENST00000437531 273 ntBASIC3.7□□□□□ -1.82
CLRN3Q8NCR9 AC125238.1-201ENST00000448842 249 ntBASIC3.7□□□□□ -1.82
CLRN3Q8NCR9 AC010099.1-201ENST00000455434 375 ntBASIC3.7□□□□□ -1.82
CLRN3Q8NCR9 MTCO3P10-201ENST00000455912 772 ntBASIC3.7□□□□□ -1.82
CLRN3Q8NCR9 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC3.7□□□□□ -1.82
CLRN3Q8NCR9 RN7SL717P-201ENST00000478343 297 ntBASIC3.7□□□□□ -1.82
CLRN3Q8NCR9 RN7SL812P-201ENST00000493791 279 ntBASIC3.7□□□□□ -1.82
CLRN3Q8NCR9 AC025164.1-201ENST00000496249 478 ntBASIC3.7□□□□□ -1.82
CLRN3Q8NCR9 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC3.7□□□□□ -1.82
CLRN3Q8NCR9 SMURF2P1-201ENST00000514992 481 ntBASIC3.7□□□□□ -1.82
CLRN3Q8NCR9 RNA5SP143-201ENST00000516936 115 ntBASIC3.7□□□□□ -1.82
CLRN3Q8NCR9 SNORA43.3-201ENST00000517240 103 ntBASIC3.7□□□□□ -1.82
CLRN3Q8NCR9 RNU6-709P-201ENST00000517257 104 ntBASIC3.7□□□□□ -1.82
CLRN3Q8NCR9 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
CLRN3Q8NCR9 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC3.7□□□□□ -1.82
CLRN3Q8NCR9 AP000763.3-201ENST00000542598 334 ntTSL 5 BASIC3.7□□□□□ -1.82
CLRN3Q8NCR9 AC091516.1-201ENST00000549191 703 ntBASIC3.7□□□□□ -1.82
CLRN3Q8NCR9 AC005476.1-201ENST00000554427 397 ntBASIC3.7□□□□□ -1.82
CLRN3Q8NCR9 UBE2Q2P8-201ENST00000560644 102 ntBASIC3.7□□□□□ -1.82
CLRN3Q8NCR9 CPDP1-201ENST00000579660 283 ntBASIC3.7□□□□□ -1.82
CLRN3Q8NCR9 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC3.7□□□□□ -1.82
CLRN3Q8NCR9 VN1R107P-201ENST00000601784 209 ntBASIC3.7□□□□□ -1.82
CLRN3Q8NCR9 HOTTIP_4.1-201ENST00000618195 165 ntBASIC3.7□□□□□ -1.82
CLRN3Q8NCR9 AL691477.1-201ENST00000624398 162 ntBASIC3.7□□□□□ -1.82
CLRN3Q8NCR9 LDHA-225ENST00000625635 141 ntTSL 5 BASIC3.7□□□□□ -1.82
CLRN3Q8NCR9 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms