Protein–RNA interactions for Protein: Q8IXS2

CCDC65, Coiled-coil domain-containing protein 65, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65Q8IXS2 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC2.47□□□□□ -2.01
CCDC65Q8IXS2 UBE2FP1-201ENST00000416536 447 ntBASIC2.47□□□□□ -2.01
CCDC65Q8IXS2 MTCO2P21-201ENST00000419780 677 ntBASIC2.47□□□□□ -2.01
CCDC65Q8IXS2 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC2.47□□□□□ -2.01
CCDC65Q8IXS2 GTF2IP20-201ENST00000431663 360 ntBASIC2.47□□□□□ -2.01
CCDC65Q8IXS2 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC2.47□□□□□ -2.01
CCDC65Q8IXS2 RPL35AP22-201ENST00000436855 335 ntBASIC2.47□□□□□ -2.01
CCDC65Q8IXS2 MTCO3P45-201ENST00000443036 613 ntBASIC2.47□□□□□ -2.01
CCDC65Q8IXS2 FAM103A2P-201ENST00000444122 354 ntBASIC2.47□□□□□ -2.01
CCDC65Q8IXS2 AC034222.1-201ENST00000494052 532 ntBASIC2.47□□□□□ -2.01
CCDC65Q8IXS2 EIF4EP3-201ENST00000498782 656 ntBASIC2.47□□□□□ -2.01
CCDC65Q8IXS2 AC138853.1-201ENST00000503549 823 ntBASIC2.47□□□□□ -2.01
CCDC65Q8IXS2 RNA5SP216-201ENST00000516111 123 ntBASIC2.47□□□□□ -2.01
CCDC65Q8IXS2 RNU6-840P-201ENST00000517275 65 ntBASIC2.47□□□□□ -2.01
CCDC65Q8IXS2 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC2.47□□□□□ -2.01
CCDC65Q8IXS2 GLYCAM1-201ENST00000546596 285 ntBASIC2.47□□□□□ -2.01
CCDC65Q8IXS2 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC2.47□□□□□ -2.01
CCDC65Q8IXS2 AL133153.1-201ENST00000557756 303 ntBASIC2.47□□□□□ -2.01
CCDC65Q8IXS2 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC2.47□□□□□ -2.01
CCDC65Q8IXS2 AC087465.1-201ENST00000560574 245 ntBASIC2.47□□□□□ -2.01
CCDC65Q8IXS2 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC2.47□□□□□ -2.01
CCDC65Q8IXS2 FTX_3.1-201ENST00000610451 147 ntBASIC2.47□□□□□ -2.01
CCDC65Q8IXS2 SDR42E1P2-201ENST00000614861 481 ntBASIC2.47□□□□□ -2.01
CCDC65Q8IXS2 MIR6852-201ENST00000621699 66 ntBASIC2.47□□□□□ -2.01
CCDC65Q8IXS2 AP000676.3-201ENST00000623299 569 ntBASIC2.47□□□□□ -2.01
CCDC65Q8IXS2 AC012640.5-201ENST00000623897 319 ntBASIC2.47□□□□□ -2.01
CCDC65Q8IXS2 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC2.47□□□□□ -2.01
CCDC65Q8IXS2 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC2.47□□□□□ -2.01
CCDC65Q8IXS2 AC006020.1-201ENST00000420179 1854 ntBASIC2.47□□□□□ -2.01
CCDC65Q8IXS2 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.46□□□□□ -2.01
CCDC65Q8IXS2 AC005336.3-201ENST00000623833 2679 ntBASIC2.46□□□□□ -2.01
CCDC65Q8IXS2 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
CCDC65Q8IXS2 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC2.46□□□□□ -2.02
CCDC65Q8IXS2 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
CCDC65Q8IXS2 RNU6-931P-201ENST00000363850 107 ntBASIC2.46□□□□□ -2.02
CCDC65Q8IXS2 RNU6-432P-201ENST00000384196 109 ntBASIC2.46□□□□□ -2.02
CCDC65Q8IXS2 RNU6-769P-201ENST00000384407 104 ntBASIC2.46□□□□□ -2.02
CCDC65Q8IXS2 U3.37-201ENST00000408528 213 ntBASIC2.46□□□□□ -2.02
CCDC65Q8IXS2 RNU4-53P-201ENST00000410828 140 ntBASIC2.46□□□□□ -2.02
CCDC65Q8IXS2 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC2.46□□□□□ -2.02
CCDC65Q8IXS2 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC2.46□□□□□ -2.02
CCDC65Q8IXS2 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC2.46□□□□□ -2.02
CCDC65Q8IXS2 CR769776.1-201ENST00000441254 787 ntBASIC2.46□□□□□ -2.02
CCDC65Q8IXS2 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC2.46□□□□□ -2.02
CCDC65Q8IXS2 AL031659.1-201ENST00000447075 539 ntBASIC2.46□□□□□ -2.02
CCDC65Q8IXS2 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC2.46□□□□□ -2.02
CCDC65Q8IXS2 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC2.46□□□□□ -2.02
CCDC65Q8IXS2 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
CCDC65Q8IXS2 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC2.46□□□□□ -2.02
CCDC65Q8IXS2 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC2.46□□□□□ -2.02
CCDC65Q8IXS2 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC2.46□□□□□ -2.02
CCDC65Q8IXS2 BTF3P12-201ENST00000519620 469 ntBASIC2.46□□□□□ -2.02
CCDC65Q8IXS2 MTND2P32-201ENST00000521584 1038 ntBASIC2.46□□□□□ -2.02
CCDC65Q8IXS2 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC2.46□□□□□ -2.02
CCDC65Q8IXS2 MIR544B-201ENST00000582372 78 ntBASIC2.46□□□□□ -2.02
CCDC65Q8IXS2 AL391001.1-201ENST00000602747 715 ntBASIC2.46□□□□□ -2.02
CCDC65Q8IXS2 AC107952.2-201ENST00000606048 486 ntBASIC2.46□□□□□ -2.02
CCDC65Q8IXS2 RNU6-88P-201ENST00000606801 100 ntBASIC2.46□□□□□ -2.02
CCDC65Q8IXS2 AC112204.3-201ENST00000623822 332 ntBASIC2.46□□□□□ -2.02
CCDC65Q8IXS2 IGHVIII-44-202ENST00000636235 289 ntBASIC2.46□□□□□ -2.02
CCDC65Q8IXS2 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC2.46□□□□□ -2.02
CCDC65Q8IXS2 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.45□□□□□ -2.02
CCDC65Q8IXS2 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
CCDC65Q8IXS2 RNU4-82P-201ENST00000362443 140 ntBASIC2.45□□□□□ -2.02
CCDC65Q8IXS2 RNU6-223P-201ENST00000362830 107 ntBASIC2.45□□□□□ -2.02
CCDC65Q8IXS2 Y_RNA.111-201ENST00000363248 100 ntBASIC2.45□□□□□ -2.02
CCDC65Q8IXS2 SNORD113-6-201ENST00000363345 75 ntBASIC2.45□□□□□ -2.02
CCDC65Q8IXS2 RNU6-140P-201ENST00000384566 108 ntBASIC2.45□□□□□ -2.02
CCDC65Q8IXS2 BTF3P7-201ENST00000407097 488 ntBASIC2.45□□□□□ -2.02
CCDC65Q8IXS2 MIR1305-201ENST00000408300 86 ntBASIC2.45□□□□□ -2.02
CCDC65Q8IXS2 AL359704.1-201ENST00000411586 781 ntBASIC2.45□□□□□ -2.02
CCDC65Q8IXS2 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC2.45□□□□□ -2.02
CCDC65Q8IXS2 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC2.45□□□□□ -2.02
CCDC65Q8IXS2 USP9YP26-201ENST00000421008 661 ntBASIC2.45□□□□□ -2.02
CCDC65Q8IXS2 AC007919.1-201ENST00000429380 217 ntBASIC2.45□□□□□ -2.02
CCDC65Q8IXS2 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC2.45□□□□□ -2.02
CCDC65Q8IXS2 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC2.45□□□□□ -2.02
CCDC65Q8IXS2 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC2.45□□□□□ -2.02
CCDC65Q8IXS2 AC087588.1-201ENST00000462203 316 ntBASIC2.45□□□□□ -2.02
CCDC65Q8IXS2 AC107626.1-201ENST00000471084 183 ntBASIC2.45□□□□□ -2.02
CCDC65Q8IXS2 AC010631.1-201ENST00000474150 156 ntBASIC2.45□□□□□ -2.02
CCDC65Q8IXS2 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC2.45□□□□□ -2.02
CCDC65Q8IXS2 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC2.45□□□□□ -2.02
CCDC65Q8IXS2 AC004263.1-201ENST00000479327 332 ntBASIC2.45□□□□□ -2.02
CCDC65Q8IXS2 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
CCDC65Q8IXS2 SUMO2P6-201ENST00000505273 288 ntBASIC2.45□□□□□ -2.02
CCDC65Q8IXS2 RNA5SP200-201ENST00000516360 103 ntBASIC2.45□□□□□ -2.02
CCDC65Q8IXS2 AC023824.2-201ENST00000566185 400 ntBASIC2.45□□□□□ -2.02
CCDC65Q8IXS2 HMGN2P15-201ENST00000585707 270 ntBASIC2.45□□□□□ -2.02
CCDC65Q8IXS2 AL357094.1-201ENST00000603845 844 ntBASIC2.45□□□□□ -2.02
CCDC65Q8IXS2 AC013244.3-201ENST00000605614 388 ntBASIC2.45□□□□□ -2.02
CCDC65Q8IXS2 DLEU1_2.1-201ENST00000617920 342 ntBASIC2.45□□□□□ -2.02
CCDC65Q8IXS2 MIR6132-201ENST00000622083 109 ntBASIC2.45□□□□□ -2.02
CCDC65Q8IXS2 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC2.45□□□□□ -2.02
CCDC65Q8IXS2 AP003399.1-201ENST00000637534 361 ntBASIC2.45□□□□□ -2.02
CCDC65Q8IXS2 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
CCDC65Q8IXS2 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
CCDC65Q8IXS2 ZNF876P-202ENST00000398732 1485 ntBASIC2.45□□□□□ -2.02
CCDC65Q8IXS2 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.44□□□□□ -2.02
CCDC65Q8IXS2 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC2.44□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 87.4 ms