Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 NUP35P1-201ENST00000422734 947 ntBASIC2.47□□□□□ -2.01
C9orf40Q8IXQ3 AC019097.1-201ENST00000424783 735 ntBASIC2.47□□□□□ -2.01
C9orf40Q8IXQ3 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC2.47□□□□□ -2.01
C9orf40Q8IXQ3 TRIM60P10Y-201ENST00000425589 751 ntBASIC2.47□□□□□ -2.01
C9orf40Q8IXQ3 AC063976.3-201ENST00000426849 329 ntBASIC2.47□□□□□ -2.01
C9orf40Q8IXQ3 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC2.47□□□□□ -2.01
C9orf40Q8IXQ3 ARL5AP4-201ENST00000430731 512 ntBASIC2.47□□□□□ -2.01
C9orf40Q8IXQ3 FCF1P1-201ENST00000432690 571 ntBASIC2.47□□□□□ -2.01
C9orf40Q8IXQ3 TRIM60P8Y-201ENST00000436338 762 ntBASIC2.47□□□□□ -2.01
C9orf40Q8IXQ3 BNIP3P2-201ENST00000441221 577 ntBASIC2.47□□□□□ -2.01
C9orf40Q8IXQ3 AP000936.2-201ENST00000447151 681 ntBASIC2.47□□□□□ -2.01
C9orf40Q8IXQ3 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC2.47□□□□□ -2.01
C9orf40Q8IXQ3 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC2.47□□□□□ -2.01
C9orf40Q8IXQ3 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC2.47□□□□□ -2.01
C9orf40Q8IXQ3 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC2.47□□□□□ -2.01
C9orf40Q8IXQ3 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.47□□□□□ -2.01
C9orf40Q8IXQ3 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC2.47□□□□□ -2.01
C9orf40Q8IXQ3 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC2.47□□□□□ -2.01
C9orf40Q8IXQ3 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
C9orf40Q8IXQ3 ATP5F1P5-201ENST00000526403 760 ntBASIC2.47□□□□□ -2.01
C9orf40Q8IXQ3 AP003181.2-201ENST00000528941 181 ntBASIC2.47□□□□□ -2.01
C9orf40Q8IXQ3 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC2.47□□□□□ -2.01
C9orf40Q8IXQ3 AMZ2P1-203ENST00000565833 850 ntBASIC2.47□□□□□ -2.01
C9orf40Q8IXQ3 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC2.47□□□□□ -2.01
C9orf40Q8IXQ3 MIR3670-2-201ENST00000582974 65 ntBASIC2.47□□□□□ -2.01
C9orf40Q8IXQ3 MIR4635-201ENST00000583759 79 ntBASIC2.47□□□□□ -2.01
C9orf40Q8IXQ3 MIR3670-1-201ENST00000584160 65 ntBASIC2.47□□□□□ -2.01
C9orf40Q8IXQ3 MIR3670-3-201ENST00000584855 65 ntBASIC2.47□□□□□ -2.01
C9orf40Q8IXQ3 U73023.1-201ENST00000603134 700 ntBASIC2.47□□□□□ -2.01
C9orf40Q8IXQ3 AP000860.1-201ENST00000605250 559 ntBASIC2.47□□□□□ -2.01
C9orf40Q8IXQ3 RNU6-87P-201ENST00000607561 108 ntBASIC2.47□□□□□ -2.01
C9orf40Q8IXQ3 MIR3670-4-201ENST00000612260 65 ntBASIC2.47□□□□□ -2.01
C9orf40Q8IXQ3 AC006338.1-201ENST00000618453 749 ntBASIC2.47□□□□□ -2.01
C9orf40Q8IXQ3 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC2.47□□□□□ -2.01
C9orf40Q8IXQ3 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
C9orf40Q8IXQ3 AC093010.3-201ENST00000570269 15214 ntBASIC2.47□□□□□ -2.01
C9orf40Q8IXQ3 RNU6-270P-201ENST00000364131 105 ntBASIC2.46□□□□□ -2.02
C9orf40Q8IXQ3 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
C9orf40Q8IXQ3 MRPL42P2-201ENST00000403169 426 ntBASIC2.46□□□□□ -2.02
C9orf40Q8IXQ3 RNA5SP184-201ENST00000411071 108 ntBASIC2.46□□□□□ -2.02
C9orf40Q8IXQ3 BTF3L4P3-201ENST00000418879 476 ntBASIC2.46□□□□□ -2.02
C9orf40Q8IXQ3 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC2.46□□□□□ -2.02
C9orf40Q8IXQ3 AC092047.1-201ENST00000424997 240 ntBASIC2.46□□□□□ -2.02
C9orf40Q8IXQ3 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.46□□□□□ -2.02
C9orf40Q8IXQ3 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC2.46□□□□□ -2.02
C9orf40Q8IXQ3 MRPL50P4-201ENST00000446432 475 ntBASIC2.46□□□□□ -2.02
C9orf40Q8IXQ3 AL109933.2-201ENST00000452651 260 ntBASIC2.46□□□□□ -2.02
C9orf40Q8IXQ3 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC2.46□□□□□ -2.02
C9orf40Q8IXQ3 SNRPGP9-201ENST00000456025 225 ntBASIC2.46□□□□□ -2.02
C9orf40Q8IXQ3 SNRPFP4-201ENST00000456366 242 ntBASIC2.46□□□□□ -2.02
C9orf40Q8IXQ3 snoU13.28-201ENST00000459235 104 ntBASIC2.46□□□□□ -2.02
C9orf40Q8IXQ3 RPS27AP9-201ENST00000477681 438 ntBASIC2.46□□□□□ -2.02
C9orf40Q8IXQ3 RNU6-927P-201ENST00000516199 100 ntBASIC2.46□□□□□ -2.02
C9orf40Q8IXQ3 RN7SKP258-201ENST00000517151 304 ntBASIC2.46□□□□□ -2.02
C9orf40Q8IXQ3 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC2.46□□□□□ -2.02
C9orf40Q8IXQ3 AP003467.2-201ENST00000520175 319 ntBASIC2.46□□□□□ -2.02
C9orf40Q8IXQ3 AP003122.4-201ENST00000530980 758 ntBASIC2.46□□□□□ -2.02
C9orf40Q8IXQ3 AC004486.1-201ENST00000546846 233 ntBASIC2.46□□□□□ -2.02
C9orf40Q8IXQ3 RPL21P5-201ENST00000554662 472 ntBASIC2.46□□□□□ -2.02
C9orf40Q8IXQ3 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC2.46□□□□□ -2.02
C9orf40Q8IXQ3 GLUD1P4-201ENST00000590914 418 ntBASIC2.46□□□□□ -2.02
C9orf40Q8IXQ3 CLIC4P2-201ENST00000601934 717 ntBASIC2.46□□□□□ -2.02
C9orf40Q8IXQ3 AL590229.1-201ENST00000603497 542 ntBASIC2.46□□□□□ -2.02
C9orf40Q8IXQ3 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC2.46□□□□□ -2.02
C9orf40Q8IXQ3 AC007998.5-201ENST00000622938 237 ntBASIC2.46□□□□□ -2.02
C9orf40Q8IXQ3 AC099654.13-201ENST00000639774 207 ntBASIC2.46□□□□□ -2.02
C9orf40Q8IXQ3 AC233263.6-201ENST00000631132 1963 ntBASIC2.46□□□□□ -2.02
C9orf40Q8IXQ3 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
C9orf40Q8IXQ3 EFTUD1P2-201ENST00000514817 1603 ntBASIC2.46□□□□□ -2.02
C9orf40Q8IXQ3 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.46□□□□□ -2.02
C9orf40Q8IXQ3 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC2.45□□□□□ -2.02
C9orf40Q8IXQ3 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
C9orf40Q8IXQ3 VTRNA1-1-201ENST00000363120 99 ntBASIC2.45□□□□□ -2.02
C9orf40Q8IXQ3 RNU6-1035P-201ENST00000384477 107 ntBASIC2.45□□□□□ -2.02
C9orf40Q8IXQ3 NDUFS5P1-201ENST00000405668 289 ntBASIC2.45□□□□□ -2.02
C9orf40Q8IXQ3 RPL19P1-201ENST00000411635 428 ntBASIC2.45□□□□□ -2.02
C9orf40Q8IXQ3 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC2.45□□□□□ -2.02
C9orf40Q8IXQ3 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
C9orf40Q8IXQ3 SLC44A3-AS1-205ENST00000424505 612 ntBASIC2.45□□□□□ -2.02
C9orf40Q8IXQ3 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC2.45□□□□□ -2.02
C9orf40Q8IXQ3 RPL36AP6-201ENST00000435770 321 ntBASIC2.45□□□□□ -2.02
C9orf40Q8IXQ3 TAF9P1-201ENST00000445421 515 ntBASIC2.45□□□□□ -2.02
C9orf40Q8IXQ3 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC2.45□□□□□ -2.02
C9orf40Q8IXQ3 TAF9P2-201ENST00000454958 515 ntBASIC2.45□□□□□ -2.02
C9orf40Q8IXQ3 MTND1P12-201ENST00000455231 147 ntBASIC2.45□□□□□ -2.02
C9orf40Q8IXQ3 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC2.45□□□□□ -2.02
C9orf40Q8IXQ3 AC008571.1-201ENST00000467232 300 ntBASIC2.45□□□□□ -2.02
C9orf40Q8IXQ3 AC103975.1-201ENST00000482506 483 ntBASIC2.45□□□□□ -2.02
C9orf40Q8IXQ3 AL160314.1-201ENST00000490836 438 ntBASIC2.45□□□□□ -2.02
C9orf40Q8IXQ3 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC2.45□□□□□ -2.02
C9orf40Q8IXQ3 RNU6-56P-201ENST00000516986 93 ntBASIC2.45□□□□□ -2.02
C9orf40Q8IXQ3 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC2.45□□□□□ -2.02
C9orf40Q8IXQ3 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC2.45□□□□□ -2.02
C9orf40Q8IXQ3 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC2.45□□□□□ -2.02
C9orf40Q8IXQ3 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC2.45□□□□□ -2.02
C9orf40Q8IXQ3 AC128657.1-201ENST00000549459 145 ntBASIC2.45□□□□□ -2.02
C9orf40Q8IXQ3 AC009977.1-201ENST00000586015 570 ntBASIC2.45□□□□□ -2.02
C9orf40Q8IXQ3 HMGN1P30-201ENST00000589286 268 ntBASIC2.45□□□□□ -2.02
C9orf40Q8IXQ3 BNIP3P8-201ENST00000597863 560 ntBASIC2.45□□□□□ -2.02
C9orf40Q8IXQ3 Z94722.1-201ENST00000604328 474 ntBASIC2.45□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 113.6 ms