Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC4.17□□□□□ -1.74
TRIM48Q8IWZ4 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC4.17□□□□□ -1.74
TRIM48Q8IWZ4 RPL23AP97-201ENST00000568955 471 ntBASIC4.17□□□□□ -1.74
TRIM48Q8IWZ4 SNORD84-203ENST00000584275 78 ntBASIC4.17□□□□□ -1.74
TRIM48Q8IWZ4 AC006006.1-201ENST00000603082 144 ntBASIC4.17□□□□□ -1.74
TRIM48Q8IWZ4 FAM27D1-201ENST00000612308 341 ntBASIC4.17□□□□□ -1.74
TRIM48Q8IWZ4 AL138721.1-201ENST00000616756 179 ntBASIC4.17□□□□□ -1.74
TRIM48Q8IWZ4 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
TRIM48Q8IWZ4 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
TRIM48Q8IWZ4 AL512643.1-201ENST00000635735 524 ntBASIC4.17□□□□□ -1.74
TRIM48Q8IWZ4 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC4.17□□□□□ -1.74
TRIM48Q8IWZ4 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
TRIM48Q8IWZ4 OR4G2P-202ENST00000641004 1759 ntBASIC4.17□□□□□ -1.74
TRIM48Q8IWZ4 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
TRIM48Q8IWZ4 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
TRIM48Q8IWZ4 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
TRIM48Q8IWZ4 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
TRIM48Q8IWZ4 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC4.16□□□□□ -1.74
TRIM48Q8IWZ4 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
TRIM48Q8IWZ4 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
TRIM48Q8IWZ4 Y_RNA.480-201ENST00000384364 102 ntBASIC4.16□□□□□ -1.74
TRIM48Q8IWZ4 Y_RNA.557-201ENST00000384680 107 ntBASIC4.16□□□□□ -1.74
TRIM48Q8IWZ4 MIR124-3-201ENST00000384866 87 ntBASIC4.16□□□□□ -1.74
TRIM48Q8IWZ4 AC244098.2-201ENST00000422068 99 ntBASIC4.16□□□□□ -1.74
TRIM48Q8IWZ4 AC008267.5-201ENST00000424928 265 ntBASIC4.16□□□□□ -1.74
TRIM48Q8IWZ4 AL157831.1-201ENST00000426134 473 ntBASIC4.16□□□□□ -1.74
TRIM48Q8IWZ4 AC004975.1-201ENST00000428733 208 ntBASIC4.16□□□□□ -1.74
TRIM48Q8IWZ4 COX6B1P7-201ENST00000430845 235 ntBASIC4.16□□□□□ -1.74
TRIM48Q8IWZ4 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC4.16□□□□□ -1.74
TRIM48Q8IWZ4 RANP8-201ENST00000444720 713 ntBASIC4.16□□□□□ -1.74
TRIM48Q8IWZ4 FTH1P25-201ENST00000447665 469 ntBASIC4.16□□□□□ -1.74
TRIM48Q8IWZ4 RPL23AP81-201ENST00000455252 467 ntBASIC4.16□□□□□ -1.74
TRIM48Q8IWZ4 SNORD5.1-201ENST00000458800 75 ntBASIC4.16□□□□□ -1.74
TRIM48Q8IWZ4 RPL7P5-201ENST00000471472 736 ntBASIC4.16□□□□□ -1.74
TRIM48Q8IWZ4 RPS29P19-201ENST00000479709 171 ntBASIC4.16□□□□□ -1.74
TRIM48Q8IWZ4 AC108860.1-201ENST00000484521 383 ntBASIC4.16□□□□□ -1.74
TRIM48Q8IWZ4 MLLT10P2-201ENST00000506434 249 ntBASIC4.16□□□□□ -1.74
TRIM48Q8IWZ4 PPBPP1-201ENST00000510807 373 ntBASIC4.16□□□□□ -1.74
TRIM48Q8IWZ4 SNORA31.20-201ENST00000517111 133 ntBASIC4.16□□□□□ -1.74
TRIM48Q8IWZ4 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC4.16□□□□□ -1.74
TRIM48Q8IWZ4 AC100770.1-201ENST00000532310 322 ntBASIC4.16□□□□□ -1.74
TRIM48Q8IWZ4 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC4.16□□□□□ -1.74
TRIM48Q8IWZ4 MIR548AC-201ENST00000585049 88 ntBASIC4.16□□□□□ -1.74
TRIM48Q8IWZ4 AL139395.1-201ENST00000603662 160 ntBASIC4.16□□□□□ -1.74
TRIM48Q8IWZ4 AC034102.8-201ENST00000615146 484 ntBASIC4.16□□□□□ -1.74
TRIM48Q8IWZ4 MIR8059-201ENST00000620427 81 ntBASIC4.16□□□□□ -1.74
TRIM48Q8IWZ4 AC067931.1-201ENST00000624190 671 ntBASIC4.16□□□□□ -1.74
TRIM48Q8IWZ4 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC4.16□□□□□ -1.74
TRIM48Q8IWZ4 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
TRIM48Q8IWZ4 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC4.16□□□□□ -1.74
TRIM48Q8IWZ4 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
TRIM48Q8IWZ4 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC4.16□□□□□ -1.74
TRIM48Q8IWZ4 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC4.16□□□□□ -1.74
TRIM48Q8IWZ4 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC4.15□□□□□ -1.74
TRIM48Q8IWZ4 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
TRIM48Q8IWZ4 RNA5SP22-201ENST00000365393 109 ntBASIC4.15□□□□□ -1.75
TRIM48Q8IWZ4 RNU6-1329P-201ENST00000365664 107 ntBASIC4.15□□□□□ -1.75
TRIM48Q8IWZ4 RNU6-842P-201ENST00000384269 107 ntBASIC4.15□□□□□ -1.75
TRIM48Q8IWZ4 RNU6-505P-201ENST00000384427 107 ntBASIC4.15□□□□□ -1.75
TRIM48Q8IWZ4 RNU6-1179P-201ENST00000384667 107 ntBASIC4.15□□□□□ -1.75
TRIM48Q8IWZ4 MIR517A-201ENST00000385001 87 ntBASIC4.15□□□□□ -1.75
TRIM48Q8IWZ4 MIR93-201ENST00000385024 80 ntBASIC4.15□□□□□ -1.75
TRIM48Q8IWZ4 AL022722.2-201ENST00000402519 180 ntBASIC4.15□□□□□ -1.75
TRIM48Q8IWZ4 MIR548F4-201ENST00000408515 105 ntBASIC4.15□□□□□ -1.75
TRIM48Q8IWZ4 AL513331.1-201ENST00000411908 397 ntBASIC4.15□□□□□ -1.75
TRIM48Q8IWZ4 AC108032.1-201ENST00000416706 207 ntBASIC4.15□□□□□ -1.75
TRIM48Q8IWZ4 TOMM22P1-201ENST00000418578 312 ntBASIC4.15□□□□□ -1.75
TRIM48Q8IWZ4 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC4.15□□□□□ -1.75
TRIM48Q8IWZ4 AC243428.1-201ENST00000421099 264 ntBASIC4.15□□□□□ -1.75
TRIM48Q8IWZ4 USMG5P1-201ENST00000425964 177 ntBASIC4.15□□□□□ -1.75
TRIM48Q8IWZ4 SNRPEP4-201ENST00000435815 279 ntBASIC4.15□□□□□ -1.75
TRIM48Q8IWZ4 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC4.15□□□□□ -1.75
TRIM48Q8IWZ4 HSPD1P21-201ENST00000436541 245 ntBASIC4.15□□□□□ -1.75
TRIM48Q8IWZ4 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC4.15□□□□□ -1.75
TRIM48Q8IWZ4 RPS15AP34-201ENST00000487776 387 ntBASIC4.15□□□□□ -1.75
TRIM48Q8IWZ4 AC018437.1-201ENST00000492214 406 ntBASIC4.15□□□□□ -1.75
TRIM48Q8IWZ4 RN7SL691P-201ENST00000494487 301 ntBASIC4.15□□□□□ -1.75
TRIM48Q8IWZ4 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC4.15□□□□□ -1.75
TRIM48Q8IWZ4 APOOP4-201ENST00000513530 597 ntBASIC4.15□□□□□ -1.75
TRIM48Q8IWZ4 RNU6-927P-201ENST00000516199 100 ntBASIC4.15□□□□□ -1.75
TRIM48Q8IWZ4 RNA5SP73-201ENST00000516744 108 ntBASIC4.15□□□□□ -1.75
TRIM48Q8IWZ4 AP004371.1-201ENST00000525240 214 ntBASIC4.15□□□□□ -1.75
TRIM48Q8IWZ4 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
TRIM48Q8IWZ4 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC4.15□□□□□ -1.75
TRIM48Q8IWZ4 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
TRIM48Q8IWZ4 SNORD39.4-201ENST00000620099 78 ntBASIC4.15□□□□□ -1.75
TRIM48Q8IWZ4 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC4.15□□□□□ -1.75
TRIM48Q8IWZ4 AL023881.1-201ENST00000621088 301 ntBASIC4.15□□□□□ -1.75
TRIM48Q8IWZ4 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC4.15□□□□□ -1.75
TRIM48Q8IWZ4 AC138305.3-201ENST00000624988 240 ntBASIC4.15□□□□□ -1.75
TRIM48Q8IWZ4 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.15□□□□□ -1.75
TRIM48Q8IWZ4 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
TRIM48Q8IWZ4 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC4.15□□□□□ -1.75
TRIM48Q8IWZ4 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
TRIM48Q8IWZ4 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
TRIM48Q8IWZ4 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
TRIM48Q8IWZ4 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
TRIM48Q8IWZ4 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
TRIM48Q8IWZ4 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
TRIM48Q8IWZ4 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC4.14□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 95.2 ms