Protein–RNA interactions for Protein: Q8IWA6

CCDC60, Coiled-coil domain-containing protein 60, humanhuman

Predicted RBP Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60Q8IWA6 AL139039.1-201ENST00000401900 692 ntBASIC2.96□□□□□ -1.94
CCDC60Q8IWA6 AL590383.1-201ENST00000428602 75 ntBASIC2.96□□□□□ -1.94
CCDC60Q8IWA6 USP12PX-201ENST00000432383 1057 ntBASIC2.96□□□□□ -1.94
CCDC60Q8IWA6 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC2.96□□□□□ -1.94
CCDC60Q8IWA6 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC2.96□□□□□ -1.94
CCDC60Q8IWA6 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC2.96□□□□□ -1.94
CCDC60Q8IWA6 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC2.96□□□□□ -1.94
CCDC60Q8IWA6 RNA5SP269-201ENST00000459032 137 ntBASIC2.96□□□□□ -1.94
CCDC60Q8IWA6 AC117522.2-201ENST00000510049 657 ntBASIC2.96□□□□□ -1.94
CCDC60Q8IWA6 CDC42P4-201ENST00000510507 563 ntBASIC2.96□□□□□ -1.94
CCDC60Q8IWA6 RNA5SP76-201ENST00000516277 87 ntBASIC2.96□□□□□ -1.94
CCDC60Q8IWA6 SCARNA15.2-201ENST00000516409 127 ntBASIC2.96□□□□□ -1.94
CCDC60Q8IWA6 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC2.96□□□□□ -1.94
CCDC60Q8IWA6 AP003467.2-201ENST00000520175 319 ntBASIC2.96□□□□□ -1.94
CCDC60Q8IWA6 RGS4-209ENST00000531057 544 ntTSL 4 BASIC2.96□□□□□ -1.94
CCDC60Q8IWA6 AC007115.1-201ENST00000546853 234 ntBASIC2.96□□□□□ -1.94
CCDC60Q8IWA6 AC124947.2-202ENST00000552735 133 ntBASIC2.96□□□□□ -1.94
CCDC60Q8IWA6 MIR4635-201ENST00000583759 79 ntBASIC2.96□□□□□ -1.94
CCDC60Q8IWA6 MIR4293-201ENST00000584305 78 ntBASIC2.96□□□□□ -1.94
CCDC60Q8IWA6 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC2.96□□□□□ -1.94
CCDC60Q8IWA6 AC073544.2-201ENST00000601155 540 ntBASIC2.96□□□□□ -1.94
CCDC60Q8IWA6 SEPT7P9-203ENST00000604116 343 ntBASIC2.96□□□□□ -1.94
CCDC60Q8IWA6 AC135507.1-201ENST00000607214 561 ntBASIC2.96□□□□□ -1.94
CCDC60Q8IWA6 AC004908.3-201ENST00000610248 625 ntBASIC2.96□□□□□ -1.94
CCDC60Q8IWA6 AC013476.2-201ENST00000614456 459 ntBASIC2.96□□□□□ -1.94
CCDC60Q8IWA6 uc_338.12-201ENST00000616344 181 ntBASIC2.96□□□□□ -1.94
CCDC60Q8IWA6 SNHG22-203ENST00000617833 660 ntBASIC2.96□□□□□ -1.94
CCDC60Q8IWA6 LRRC77P-213ENST00000637727 880 ntBASIC2.96□□□□□ -1.94
CCDC60Q8IWA6 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC2.96□□□□□ -1.94
CCDC60Q8IWA6 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
CCDC60Q8IWA6 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC2.95□□□□□ -1.94
CCDC60Q8IWA6 AC233263.6-201ENST00000631132 1963 ntBASIC2.95□□□□□ -1.94
CCDC60Q8IWA6 Y_RNA.77-201ENST00000362962 107 ntBASIC2.95□□□□□ -1.94
CCDC60Q8IWA6 RNU6-799P-201ENST00000363567 107 ntBASIC2.95□□□□□ -1.94
CCDC60Q8IWA6 MIR325-201ENST00000385260 98 ntBASIC2.95□□□□□ -1.94
CCDC60Q8IWA6 NDUFB4P7-201ENST00000423198 363 ntBASIC2.95□□□□□ -1.94
CCDC60Q8IWA6 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC2.95□□□□□ -1.94
CCDC60Q8IWA6 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC2.95□□□□□ -1.94
CCDC60Q8IWA6 AC119618.1-201ENST00000434191 222 ntBASIC2.95□□□□□ -1.94
CCDC60Q8IWA6 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC2.95□□□□□ -1.94
CCDC60Q8IWA6 AL022238.1-201ENST00000442557 355 ntBASIC2.95□□□□□ -1.94
CCDC60Q8IWA6 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC2.95□□□□□ -1.94
CCDC60Q8IWA6 AC009237.8-201ENST00000445492 379 ntBASIC2.95□□□□□ -1.94
CCDC60Q8IWA6 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC2.95□□□□□ -1.94
CCDC60Q8IWA6 KC877373.1-201ENST00000479066 408 ntBASIC2.95□□□□□ -1.94
CCDC60Q8IWA6 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC2.95□□□□□ -1.94
CCDC60Q8IWA6 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC2.95□□□□□ -1.94
CCDC60Q8IWA6 AC096725.1-201ENST00000514266 313 ntBASIC2.95□□□□□ -1.94
CCDC60Q8IWA6 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC2.95□□□□□ -1.94
CCDC60Q8IWA6 CASP1P1-201ENST00000526345 212 ntBASIC2.95□□□□□ -1.94
CCDC60Q8IWA6 AC093012.1-202ENST00000549403 582 ntBASIC2.95□□□□□ -1.94
CCDC60Q8IWA6 AC234778.2-201ENST00000566241 354 ntBASIC2.95□□□□□ -1.94
CCDC60Q8IWA6 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC2.95□□□□□ -1.94
CCDC60Q8IWA6 AC002545.1-201ENST00000592511 181 ntBASIC2.95□□□□□ -1.94
CCDC60Q8IWA6 AC119751.7-201ENST00000600494 245 ntBASIC2.95□□□□□ -1.94
CCDC60Q8IWA6 DPPA3P3-201ENST00000603842 430 ntBASIC2.95□□□□□ -1.94
CCDC60Q8IWA6 AL358072.1-201ENST00000604156 575 ntBASIC2.95□□□□□ -1.94
CCDC60Q8IWA6 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC2.95□□□□□ -1.94
CCDC60Q8IWA6 AC092608.2-201ENST00000624427 218 ntBASIC2.95□□□□□ -1.94
CCDC60Q8IWA6 AL603839.4-201ENST00000624658 1005 ntBASIC2.95□□□□□ -1.94
CCDC60Q8IWA6 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.95□□□□□ -1.94
CCDC60Q8IWA6 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.94□□□□□ -1.94
CCDC60Q8IWA6 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
CCDC60Q8IWA6 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
CCDC60Q8IWA6 RNA5SP68-201ENST00000363885 119 ntBASIC2.94□□□□□ -1.94
CCDC60Q8IWA6 RNY4P34-201ENST00000364779 95 ntBASIC2.94□□□□□ -1.94
CCDC60Q8IWA6 AL512633.1-201ENST00000399931 655 ntBASIC2.94□□□□□ -1.94
CCDC60Q8IWA6 AL359634.1-202ENST00000404721 284 ntBASIC2.94□□□□□ -1.94
CCDC60Q8IWA6 RNU2-62P-201ENST00000410868 191 ntBASIC2.94□□□□□ -1.94
CCDC60Q8IWA6 RPS3AP3-201ENST00000411933 242 ntBASIC2.94□□□□□ -1.94
CCDC60Q8IWA6 SEPT2P1-201ENST00000419651 180 ntBASIC2.94□□□□□ -1.94
CCDC60Q8IWA6 AL451054.2-201ENST00000420896 202 ntBASIC2.94□□□□□ -1.94
CCDC60Q8IWA6 AC006366.1-201ENST00000422002 759 ntBASIC2.94□□□□□ -1.94
CCDC60Q8IWA6 AL589872.1-201ENST00000426602 288 ntBASIC2.94□□□□□ -1.94
CCDC60Q8IWA6 AC007919.1-201ENST00000429380 217 ntBASIC2.94□□□□□ -1.94
CCDC60Q8IWA6 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC2.94□□□□□ -1.94
CCDC60Q8IWA6 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC2.94□□□□□ -1.94
CCDC60Q8IWA6 MTATP6P30-201ENST00000443540 664 ntBASIC2.94□□□□□ -1.94
CCDC60Q8IWA6 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC2.94□□□□□ -1.94
CCDC60Q8IWA6 ST13P20-201ENST00000447996 1065 ntBASIC2.94□□□□□ -1.94
CCDC60Q8IWA6 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
CCDC60Q8IWA6 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC2.94□□□□□ -1.94
CCDC60Q8IWA6 RNU6-956P-201ENST00000458868 103 ntBASIC2.94□□□□□ -1.94
CCDC60Q8IWA6 RPS29P12-201ENST00000460178 152 ntBASIC2.94□□□□□ -1.94
CCDC60Q8IWA6 RN7SL499P-201ENST00000481141 276 ntBASIC2.94□□□□□ -1.94
CCDC60Q8IWA6 AC010587.1-201ENST00000505809 469 ntBASIC2.94□□□□□ -1.94
CCDC60Q8IWA6 MEPE-206ENST00000511670 550 ntTSL 4 BASIC2.94□□□□□ -1.94
CCDC60Q8IWA6 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC2.94□□□□□ -1.94
CCDC60Q8IWA6 AC114781.4-201ENST00000513707 639 ntBASIC2.94□□□□□ -1.94
CCDC60Q8IWA6 Y_RNA.672-201ENST00000516289 104 ntBASIC2.94□□□□□ -1.94
CCDC60Q8IWA6 RNA5SP282-201ENST00000516355 108 ntBASIC2.94□□□□□ -1.94
CCDC60Q8IWA6 NRON-201ENST00000517270 370 ntBASIC2.94□□□□□ -1.94
CCDC60Q8IWA6 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC2.94□□□□□ -1.94
CCDC60Q8IWA6 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC2.94□□□□□ -1.94
CCDC60Q8IWA6 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC2.94□□□□□ -1.94
CCDC60Q8IWA6 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC2.94□□□□□ -1.94
CCDC60Q8IWA6 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC2.94□□□□□ -1.94
CCDC60Q8IWA6 AC137800.2-201ENST00000574375 120 ntBASIC2.94□□□□□ -1.94
CCDC60Q8IWA6 AP005136.1-201ENST00000579765 429 ntBASIC2.94□□□□□ -1.94
CCDC60Q8IWA6 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC2.94□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 106.8 ms