Protein–RNA interactions for Protein: Q8IW19

APLF, Aprataxin and PNK-like factor, humanhuman

Predicted RBP Predictions only

Length 511 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APLFQ8IW19 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC3.11□□□□□ -1.91
APLFQ8IW19 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC3.11□□□□□ -1.91
APLFQ8IW19 AC004520.1-201ENST00000608362 1413 ntBASIC3.1□□□□□ -1.91
APLFQ8IW19 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
APLFQ8IW19 AP003122.5-201ENST00000527668 3766 ntBASIC3.1□□□□□ -1.91
APLFQ8IW19 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC3.1□□□□□ -1.91
APLFQ8IW19 RNU5A-8P-201ENST00000364102 114 ntBASIC3.1□□□□□ -1.91
APLFQ8IW19 RNU6-1078P-201ENST00000364522 103 ntBASIC3.1□□□□□ -1.91
APLFQ8IW19 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC3.1□□□□□ -1.91
APLFQ8IW19 MIR19A-201ENST00000384878 82 ntBASIC3.1□□□□□ -1.91
APLFQ8IW19 AL139095.1-201ENST00000404326 391 ntBASIC3.1□□□□□ -1.91
APLFQ8IW19 MIR1277-201ENST00000408536 78 ntBASIC3.1□□□□□ -1.91
APLFQ8IW19 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC3.1□□□□□ -1.91
APLFQ8IW19 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC3.1□□□□□ -1.91
APLFQ8IW19 MTCO2P19-201ENST00000427513 598 ntBASIC3.1□□□□□ -1.91
APLFQ8IW19 ELOCP14-201ENST00000428070 331 ntBASIC3.1□□□□□ -1.91
APLFQ8IW19 ELOCP7-201ENST00000439968 331 ntBASIC3.1□□□□□ -1.91
APLFQ8IW19 MTATP6P23-201ENST00000440153 476 ntBASIC3.1□□□□□ -1.91
APLFQ8IW19 AC023194.1-201ENST00000493084 308 ntBASIC3.1□□□□□ -1.91
APLFQ8IW19 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC3.1□□□□□ -1.91
APLFQ8IW19 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC3.1□□□□□ -1.91
APLFQ8IW19 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC3.1□□□□□ -1.91
APLFQ8IW19 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC3.1□□□□□ -1.91
APLFQ8IW19 RNA5SP341-201ENST00000516261 117 ntBASIC3.1□□□□□ -1.91
APLFQ8IW19 RNA5SP337-201ENST00000517007 109 ntBASIC3.1□□□□□ -1.91
APLFQ8IW19 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC3.1□□□□□ -1.91
APLFQ8IW19 AK6P1-201ENST00000540219 478 ntBASIC3.1□□□□□ -1.91
APLFQ8IW19 CR383656.7-201ENST00000548164 174 ntBASIC3.1□□□□□ -1.91
APLFQ8IW19 HMGB1P33-201ENST00000563485 527 ntBASIC3.1□□□□□ -1.91
APLFQ8IW19 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC3.1□□□□□ -1.91
APLFQ8IW19 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC3.1□□□□□ -1.91
APLFQ8IW19 MIR3167-201ENST00000579623 85 ntBASIC3.1□□□□□ -1.91
APLFQ8IW19 COX6CP3-201ENST00000580869 223 ntBASIC3.1□□□□□ -1.91
APLFQ8IW19 KC877982.1-201ENST00000602313 470 ntBASIC3.1□□□□□ -1.91
APLFQ8IW19 MIR6852-201ENST00000621699 66 ntBASIC3.1□□□□□ -1.91
APLFQ8IW19 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
APLFQ8IW19 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.1□□□□□ -1.91
APLFQ8IW19 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
APLFQ8IW19 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.09□□□□□ -1.91
APLFQ8IW19 RNY1P12-201ENST00000364251 105 ntBASIC3.09□□□□□ -1.91
APLFQ8IW19 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC3.09□□□□□ -1.91
APLFQ8IW19 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC3.09□□□□□ -1.91
APLFQ8IW19 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC3.09□□□□□ -1.91
APLFQ8IW19 RNU6-456P-201ENST00000384493 107 ntBASIC3.09□□□□□ -1.91
APLFQ8IW19 MIR181B1-201ENST00000385240 110 ntBASIC3.09□□□□□ -1.91
APLFQ8IW19 Y_RNA.604-201ENST00000410574 102 ntBASIC3.09□□□□□ -1.91
APLFQ8IW19 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC3.09□□□□□ -1.91
APLFQ8IW19 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
APLFQ8IW19 TRIM60P10Y-201ENST00000425589 751 ntBASIC3.09□□□□□ -1.91
APLFQ8IW19 OR4K11P-201ENST00000431829 904 ntBASIC3.09□□□□□ -1.91
APLFQ8IW19 AC000111.3-201ENST00000433478 193 ntBASIC3.09□□□□□ -1.91
APLFQ8IW19 TRIM60P8Y-201ENST00000436338 762 ntBASIC3.09□□□□□ -1.91
APLFQ8IW19 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC3.09□□□□□ -1.91
APLFQ8IW19 MTND1P9-201ENST00000453775 944 ntBASIC3.09□□□□□ -1.91
APLFQ8IW19 HMGN2P16-201ENST00000456802 261 ntBASIC3.09□□□□□ -1.91
APLFQ8IW19 snoU13.3-201ENST00000459441 104 ntBASIC3.09□□□□□ -1.91
APLFQ8IW19 MTCO2P29-201ENST00000465212 189 ntBASIC3.09□□□□□ -1.91
APLFQ8IW19 AC079382.1-201ENST00000493346 557 ntBASIC3.09□□□□□ -1.91
APLFQ8IW19 AC116353.2-201ENST00000505332 712 ntBASIC3.09□□□□□ -1.91
APLFQ8IW19 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC3.09□□□□□ -1.91
APLFQ8IW19 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.09□□□□□ -1.91
APLFQ8IW19 RNU6-1220P-201ENST00000517126 108 ntBASIC3.09□□□□□ -1.91
APLFQ8IW19 AC022616.3-201ENST00000523940 148 ntBASIC3.09□□□□□ -1.91
APLFQ8IW19 OR5AQ1P-201ENST00000527596 927 ntBASIC3.09□□□□□ -1.91
APLFQ8IW19 AL133271.1-201ENST00000538229 291 ntBASIC3.09□□□□□ -1.91
APLFQ8IW19 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC3.09□□□□□ -1.91
APLFQ8IW19 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC3.09□□□□□ -1.91
APLFQ8IW19 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC3.09□□□□□ -1.91
APLFQ8IW19 RPS3AP4-201ENST00000555161 764 ntBASIC3.09□□□□□ -1.91
APLFQ8IW19 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC3.09□□□□□ -1.91
APLFQ8IW19 AL451007.1-201ENST00000595491 289 ntBASIC3.09□□□□□ -1.91
APLFQ8IW19 AL031176.1-201ENST00000604554 466 ntBASIC3.09□□□□□ -1.91
APLFQ8IW19 AL136363.1-201ENST00000605349 337 ntBASIC3.09□□□□□ -1.91
APLFQ8IW19 AP002360.4-201ENST00000606980 481 ntBASIC3.09□□□□□ -1.91
APLFQ8IW19 AC007038.2-201ENST00000608095 740 ntBASIC3.09□□□□□ -1.91
APLFQ8IW19 AC004908.2-201ENST00000609090 574 ntBASIC3.09□□□□□ -1.91
APLFQ8IW19 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC3.09□□□□□ -1.91
APLFQ8IW19 uc_338.12-201ENST00000616344 181 ntBASIC3.09□□□□□ -1.91
APLFQ8IW19 AC006338.1-201ENST00000618453 749 ntBASIC3.09□□□□□ -1.91
APLFQ8IW19 AL356585.4-201ENST00000623078 1229 ntBASIC3.09□□□□□ -1.91
APLFQ8IW19 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.09□□□□□ -1.92
APLFQ8IW19 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC3.09□□□□□ -1.92
APLFQ8IW19 AL355596.1-201ENST00000565399 3996 ntBASIC3.09□□□□□ -1.92
APLFQ8IW19 MTCO1P9-201ENST00000505577 1534 ntBASIC3.09□□□□□ -1.92
APLFQ8IW19 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.08□□□□□ -1.92
APLFQ8IW19 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
APLFQ8IW19 MIR422A-201ENST00000362286 90 ntBASIC3.08□□□□□ -1.92
APLFQ8IW19 RNA5SP197-201ENST00000363357 119 ntBASIC3.08□□□□□ -1.92
APLFQ8IW19 RNU6-1090P-201ENST00000364065 94 ntBASIC3.08□□□□□ -1.92
APLFQ8IW19 RNU1-140P-201ENST00000365040 165 ntBASIC3.08□□□□□ -1.92
APLFQ8IW19 RNY3P13-201ENST00000365542 102 ntBASIC3.08□□□□□ -1.92
APLFQ8IW19 CRP-202ENST00000368110 667 ntTSL 3 BASIC3.08□□□□□ -1.92
APLFQ8IW19 Y_RNA.402-201ENST00000383972 102 ntBASIC3.08□□□□□ -1.92
APLFQ8IW19 Y_RNA.453-201ENST00000384223 109 ntBASIC3.08□□□□□ -1.92
APLFQ8IW19 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
APLFQ8IW19 RNU1-101P-201ENST00000391171 127 ntBASIC3.08□□□□□ -1.92
APLFQ8IW19 FGFR1OP2P1-201ENST00000395943 500 ntBASIC3.08□□□□□ -1.92
APLFQ8IW19 MIR1289-1-201ENST00000408836 144 ntBASIC3.08□□□□□ -1.92
APLFQ8IW19 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.08□□□□□ -1.92
APLFQ8IW19 COTL1P1-201ENST00000422309 375 ntBASIC3.08□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 134.3 ms