Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC2.43□□□□□ -2.02
CCDC50Q8IVM0 RNU6-584P-201ENST00000410350 95 ntBASIC2.43□□□□□ -2.02
CCDC50Q8IVM0 VPS26BP1-201ENST00000417155 755 ntBASIC2.43□□□□□ -2.02
CCDC50Q8IVM0 USP9YP26-201ENST00000421008 661 ntBASIC2.43□□□□□ -2.02
CCDC50Q8IVM0 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC2.43□□□□□ -2.02
CCDC50Q8IVM0 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC2.43□□□□□ -2.02
CCDC50Q8IVM0 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
CCDC50Q8IVM0 MTND1P20-201ENST00000430341 950 ntBASIC2.43□□□□□ -2.02
CCDC50Q8IVM0 RPS15AP28-201ENST00000435088 386 ntBASIC2.43□□□□□ -2.02
CCDC50Q8IVM0 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC2.43□□□□□ -2.02
CCDC50Q8IVM0 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC2.43□□□□□ -2.02
CCDC50Q8IVM0 RPS15AP5-201ENST00000436276 388 ntBASIC2.43□□□□□ -2.02
CCDC50Q8IVM0 AC005094.1-201ENST00000440420 368 ntBASIC2.43□□□□□ -2.02
CCDC50Q8IVM0 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC2.43□□□□□ -2.02
CCDC50Q8IVM0 AC011753.1-201ENST00000451001 220 ntBASIC2.43□□□□□ -2.02
CCDC50Q8IVM0 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC2.43□□□□□ -2.02
CCDC50Q8IVM0 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
CCDC50Q8IVM0 RPL26P9-201ENST00000457466 433 ntBASIC2.43□□□□□ -2.02
CCDC50Q8IVM0 AC104435.1-201ENST00000483483 166 ntBASIC2.43□□□□□ -2.02
CCDC50Q8IVM0 AC106872.3-201ENST00000495104 446 ntBASIC2.43□□□□□ -2.02
CCDC50Q8IVM0 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC2.43□□□□□ -2.02
CCDC50Q8IVM0 AC234781.5-201ENST00000508429 271 ntBASIC2.43□□□□□ -2.02
CCDC50Q8IVM0 AC113155.1-201ENST00000511141 769 ntBASIC2.43□□□□□ -2.02
CCDC50Q8IVM0 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.43□□□□□ -2.02
CCDC50Q8IVM0 SCARNA1-201ENST00000517138 166 ntBASIC2.43□□□□□ -2.02
CCDC50Q8IVM0 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC2.43□□□□□ -2.02
CCDC50Q8IVM0 AC022634.1-201ENST00000520765 532 ntBASIC2.43□□□□□ -2.02
CCDC50Q8IVM0 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC2.43□□□□□ -2.02
CCDC50Q8IVM0 AP004247.1-201ENST00000531556 1289 ntBASIC2.43□□□□□ -2.02
CCDC50Q8IVM0 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC2.43□□□□□ -2.02
CCDC50Q8IVM0 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC2.43□□□□□ -2.02
CCDC50Q8IVM0 MIR4658-201ENST00000584344 65 ntBASIC2.43□□□□□ -2.02
CCDC50Q8IVM0 AC005498.1-201ENST00000592125 465 ntBASIC2.43□□□□□ -2.02
CCDC50Q8IVM0 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC2.43□□□□□ -2.02
CCDC50Q8IVM0 AC013244.3-201ENST00000605614 388 ntBASIC2.43□□□□□ -2.02
CCDC50Q8IVM0 AC046143.2-201ENST00000609789 160 ntBASIC2.43□□□□□ -2.02
CCDC50Q8IVM0 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC2.43□□□□□ -2.02
CCDC50Q8IVM0 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
CCDC50Q8IVM0 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
CCDC50Q8IVM0 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.43□□□□□ -2.02
CCDC50Q8IVM0 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
CCDC50Q8IVM0 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
CCDC50Q8IVM0 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
CCDC50Q8IVM0 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC2.42□□□□□ -2.02
CCDC50Q8IVM0 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC2.42□□□□□ -2.02
CCDC50Q8IVM0 AL596028.1-201ENST00000326971 197 ntBASIC2.42□□□□□ -2.02
CCDC50Q8IVM0 RNU6-931P-201ENST00000363850 107 ntBASIC2.42□□□□□ -2.02
CCDC50Q8IVM0 RNU6-461P-201ENST00000364195 107 ntBASIC2.42□□□□□ -2.02
CCDC50Q8IVM0 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC2.42□□□□□ -2.02
CCDC50Q8IVM0 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC2.42□□□□□ -2.02
CCDC50Q8IVM0 OR5H15-201ENST00000383696 930 ntBASIC2.42□□□□□ -2.02
CCDC50Q8IVM0 RSL24D1P4-201ENST00000400938 484 ntBASIC2.42□□□□□ -2.02
CCDC50Q8IVM0 AL513475.1-201ENST00000406602 315 ntBASIC2.42□□□□□ -2.02
CCDC50Q8IVM0 MIR1305-201ENST00000408300 86 ntBASIC2.42□□□□□ -2.02
CCDC50Q8IVM0 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC2.42□□□□□ -2.02
CCDC50Q8IVM0 AC078974.1-201ENST00000411597 223 ntBASIC2.42□□□□□ -2.02
CCDC50Q8IVM0 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.42□□□□□ -2.02
CCDC50Q8IVM0 SKA2P1-201ENST00000425592 390 ntBASIC2.42□□□□□ -2.02
CCDC50Q8IVM0 AL358075.3-201ENST00000426289 226 ntBASIC2.42□□□□□ -2.02
CCDC50Q8IVM0 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC2.42□□□□□ -2.02
CCDC50Q8IVM0 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
CCDC50Q8IVM0 AC244035.1-201ENST00000430042 390 ntBASIC2.42□□□□□ -2.02
CCDC50Q8IVM0 USP12PX-201ENST00000432383 1057 ntBASIC2.42□□□□□ -2.02
CCDC50Q8IVM0 MTND1P28-201ENST00000435623 950 ntBASIC2.42□□□□□ -2.02
CCDC50Q8IVM0 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC2.42□□□□□ -2.02
CCDC50Q8IVM0 SNRPEP9-201ENST00000436794 238 ntBASIC2.42□□□□□ -2.02
CCDC50Q8IVM0 LARP1BP3-201ENST00000437229 869 ntBASIC2.42□□□□□ -2.02
CCDC50Q8IVM0 AL445687.1-201ENST00000439946 251 ntBASIC2.42□□□□□ -2.02
CCDC50Q8IVM0 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC2.42□□□□□ -2.02
CCDC50Q8IVM0 RPS3P1-201ENST00000456781 192 ntBASIC2.42□□□□□ -2.02
CCDC50Q8IVM0 RBM43P1-201ENST00000476891 1081 ntBASIC2.42□□□□□ -2.02
CCDC50Q8IVM0 EIF4EP3-201ENST00000498782 656 ntBASIC2.42□□□□□ -2.02
CCDC50Q8IVM0 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
CCDC50Q8IVM0 LTV1P1-201ENST00000510683 1237 ntBASIC2.42□□□□□ -2.02
CCDC50Q8IVM0 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC2.42□□□□□ -2.02
CCDC50Q8IVM0 RNU4-29P-201ENST00000515943 174 ntBASIC2.42□□□□□ -2.02
CCDC50Q8IVM0 RNU6-927P-201ENST00000516199 100 ntBASIC2.42□□□□□ -2.02
CCDC50Q8IVM0 RNA5SP24-201ENST00000516478 95 ntBASIC2.42□□□□□ -2.02
CCDC50Q8IVM0 AC025755.1-201ENST00000521306 278 ntBASIC2.42□□□□□ -2.02
CCDC50Q8IVM0 SNORD53-201ENST00000579969 78 ntBASIC2.42□□□□□ -2.02
CCDC50Q8IVM0 MIR4293-201ENST00000584305 78 ntBASIC2.42□□□□□ -2.02
CCDC50Q8IVM0 AC107952.2-201ENST00000606048 486 ntBASIC2.42□□□□□ -2.02
CCDC50Q8IVM0 AC103810.6-201ENST00000606708 136 ntBASIC2.42□□□□□ -2.02
CCDC50Q8IVM0 AC024933.1-201ENST00000608472 348 ntBASIC2.42□□□□□ -2.02
CCDC50Q8IVM0 AC004908.2-201ENST00000609090 574 ntBASIC2.42□□□□□ -2.02
CCDC50Q8IVM0 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC2.42□□□□□ -2.02
CCDC50Q8IVM0 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC2.42□□□□□ -2.02
CCDC50Q8IVM0 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC2.42□□□□□ -2.02
CCDC50Q8IVM0 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC2.42□□□□□ -2.02
CCDC50Q8IVM0 MIR7515-201ENST00000637837 67 ntBASIC2.42□□□□□ -2.02
CCDC50Q8IVM0 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC2.42□□□□□ -2.02
CCDC50Q8IVM0 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
CCDC50Q8IVM0 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC2.42□□□□□ -2.02
CCDC50Q8IVM0 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
CCDC50Q8IVM0 PAPPA-AS1-201ENST00000445861 2450 ntBASIC2.41□□□□□ -2.02
CCDC50Q8IVM0 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.41□□□□□ -2.02
CCDC50Q8IVM0 Y_RNA.245-201ENST00000364493 95 ntBASIC2.41□□□□□ -2.02
CCDC50Q8IVM0 SNORA68.1-201ENST00000364537 132 ntBASIC2.41□□□□□ -2.02
CCDC50Q8IVM0 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC2.41□□□□□ -2.02
CCDC50Q8IVM0 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 90.7 ms