Protein–RNA interactions for Protein: Q86U70

LDB1, LIM domain-binding protein 1, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1Q86U70 AC105252.1-201ENST00000503089 286 ntBASIC3.05□□□□□ -1.92
LDB1Q86U70 AC138853.1-201ENST00000503549 823 ntBASIC3.05□□□□□ -1.92
LDB1Q86U70 RNU6-410P-201ENST00000517006 107 ntBASIC3.05□□□□□ -1.92
LDB1Q86U70 RNA5SP380-201ENST00000517190 98 ntBASIC3.05□□□□□ -1.92
LDB1Q86U70 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC3.05□□□□□ -1.92
LDB1Q86U70 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC3.05□□□□□ -1.92
LDB1Q86U70 AC103987.3-201ENST00000582071 292 ntBASIC3.05□□□□□ -1.92
LDB1Q86U70 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC3.05□□□□□ -1.92
LDB1Q86U70 AC098848.2-201ENST00000588023 330 ntBASIC3.05□□□□□ -1.92
LDB1Q86U70 AC104073.3-201ENST00000610942 955 ntBASIC3.05□□□□□ -1.92
LDB1Q86U70 AC007318.2-201ENST00000620999 243 ntBASIC3.05□□□□□ -1.92
LDB1Q86U70 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC3.05□□□□□ -1.92
LDB1Q86U70 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
LDB1Q86U70 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.05□□□□□ -1.92
LDB1Q86U70 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.04□□□□□ -1.92
LDB1Q86U70 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
LDB1Q86U70 MAPK10-322ENST00000641485 4530 ntBASIC3.04□□□□□ -1.92
LDB1Q86U70 RNU6-623P-201ENST00000363143 105 ntBASIC3.04□□□□□ -1.92
LDB1Q86U70 Y_RNA.318-201ENST00000365131 97 ntBASIC3.04□□□□□ -1.92
LDB1Q86U70 RNU6-108P-201ENST00000365558 107 ntBASIC3.04□□□□□ -1.92
LDB1Q86U70 Y_RNA.582-201ENST00000391023 95 ntBASIC3.04□□□□□ -1.92
LDB1Q86U70 RPL21P3-201ENST00000395517 478 ntBASIC3.04□□□□□ -1.92
LDB1Q86U70 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
LDB1Q86U70 RNU4-47P-201ENST00000410876 114 ntBASIC3.04□□□□□ -1.92
LDB1Q86U70 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC3.04□□□□□ -1.92
LDB1Q86U70 RPS12P24-201ENST00000412619 387 ntBASIC3.04□□□□□ -1.92
LDB1Q86U70 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC3.04□□□□□ -1.92
LDB1Q86U70 AC099548.1-201ENST00000421443 426 ntBASIC3.04□□□□□ -1.92
LDB1Q86U70 RPS20P5-201ENST00000434808 360 ntBASIC3.04□□□□□ -1.92
LDB1Q86U70 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC3.04□□□□□ -1.92
LDB1Q86U70 RPS24P13-201ENST00000442520 397 ntBASIC3.04□□□□□ -1.92
LDB1Q86U70 DDX3P2-201ENST00000446138 111 ntBASIC3.04□□□□□ -1.92
LDB1Q86U70 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC3.04□□□□□ -1.92
LDB1Q86U70 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC3.04□□□□□ -1.92
LDB1Q86U70 AC093899.1-201ENST00000457984 376 ntBASIC3.04□□□□□ -1.92
LDB1Q86U70 AC146507.2-201ENST00000460608 476 ntBASIC3.04□□□□□ -1.92
LDB1Q86U70 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC3.04□□□□□ -1.92
LDB1Q86U70 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
LDB1Q86U70 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
LDB1Q86U70 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC3.04□□□□□ -1.92
LDB1Q86U70 AC037471.2-201ENST00000564941 598 ntBASIC3.04□□□□□ -1.92
LDB1Q86U70 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.04□□□□□ -1.92
LDB1Q86U70 MTND1P15-201ENST00000579262 949 ntBASIC3.04□□□□□ -1.92
LDB1Q86U70 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.04□□□□□ -1.92
LDB1Q86U70 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.04□□□□□ -1.92
LDB1Q86U70 BNIP3P9-201ENST00000603714 553 ntBASIC3.04□□□□□ -1.92
LDB1Q86U70 NDUFA8P1-201ENST00000605525 367 ntBASIC3.04□□□□□ -1.92
LDB1Q86U70 AC103591.3-201ENST00000608684 209 ntBASIC3.04□□□□□ -1.92
LDB1Q86U70 AC068880.5-201ENST00000624331 290 ntBASIC3.04□□□□□ -1.92
LDB1Q86U70 LRRC77P-213ENST00000637727 880 ntBASIC3.04□□□□□ -1.92
LDB1Q86U70 AL359693.1-201ENST00000614959 2407 ntBASIC3.04□□□□□ -1.92
LDB1Q86U70 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC3.04□□□□□ -1.92
LDB1Q86U70 MAPK10-362ENST00000641864 4484 ntBASIC3.04□□□□□ -1.92
LDB1Q86U70 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC3.04□□□□□ -1.92
LDB1Q86U70 AC073346.2-201ENST00000624724 2058 ntBASIC3.04□□□□□ -1.92
LDB1Q86U70 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
LDB1Q86U70 API5P2-201ENST00000397055 1498 ntBASIC3.03□□□□□ -1.92
LDB1Q86U70 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
LDB1Q86U70 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
LDB1Q86U70 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC3.03□□□□□ -1.92
LDB1Q86U70 AC093831.2-201ENST00000624393 3427 ntBASIC3.03□□□□□ -1.92
LDB1Q86U70 AC073325.2-201ENST00000339545 159 ntBASIC3.03□□□□□ -1.92
LDB1Q86U70 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
LDB1Q86U70 RNU6-181P-201ENST00000363225 107 ntBASIC3.03□□□□□ -1.92
LDB1Q86U70 Y_RNA.333-201ENST00000365274 102 ntBASIC3.03□□□□□ -1.92
LDB1Q86U70 RNU5A-6P-201ENST00000384136 116 ntBASIC3.03□□□□□ -1.92
LDB1Q86U70 RNU6-198P-201ENST00000384258 104 ntBASIC3.03□□□□□ -1.92
LDB1Q86U70 SNORA54-201ENST00000384281 123 ntBASIC3.03□□□□□ -1.92
LDB1Q86U70 FGFR1OP2P1-201ENST00000395943 500 ntBASIC3.03□□□□□ -1.92
LDB1Q86U70 AL354719.1-201ENST00000406535 843 ntBASIC3.03□□□□□ -1.92
LDB1Q86U70 RNU6ATAC16P-201ENST00000408591 138 ntBASIC3.03□□□□□ -1.92
LDB1Q86U70 RNU2-16P-201ENST00000410712 136 ntBASIC3.03□□□□□ -1.92
LDB1Q86U70 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC3.03□□□□□ -1.92
LDB1Q86U70 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
LDB1Q86U70 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC3.03□□□□□ -1.92
LDB1Q86U70 DPPA2P1-201ENST00000428060 556 ntBASIC3.03□□□□□ -1.92
LDB1Q86U70 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC3.03□□□□□ -1.92
LDB1Q86U70 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
LDB1Q86U70 USP9YP14-201ENST00000430663 563 ntBASIC3.03□□□□□ -1.92
LDB1Q86U70 VN1R108P-201ENST00000431580 830 ntBASIC3.03□□□□□ -1.92
LDB1Q86U70 AL358934.1-201ENST00000432346 324 ntBASIC3.03□□□□□ -1.92
LDB1Q86U70 RPL23AP30-201ENST00000432419 501 ntBASIC3.03□□□□□ -1.92
LDB1Q86U70 SNRPEP9-201ENST00000436794 238 ntBASIC3.03□□□□□ -1.92
LDB1Q86U70 UQCRHP3-201ENST00000451503 251 ntBASIC3.03□□□□□ -1.92
LDB1Q86U70 CECR9-201ENST00000453421 199 ntBASIC3.03□□□□□ -1.92
LDB1Q86U70 FABP5P15-201ENST00000453566 214 ntBASIC3.03□□□□□ -1.92
LDB1Q86U70 C1DP4-201ENST00000455429 424 ntBASIC3.03□□□□□ -1.92
LDB1Q86U70 AC092798.1-201ENST00000458542 409 ntBASIC3.03□□□□□ -1.92
LDB1Q86U70 AC091179.1-201ENST00000461606 579 ntBASIC3.03□□□□□ -1.92
LDB1Q86U70 AC126389.1-201ENST00000477436 290 ntBASIC3.03□□□□□ -1.92
LDB1Q86U70 AC006445.1-201ENST00000491925 405 ntBASIC3.03□□□□□ -1.92
LDB1Q86U70 RNU6-143P-201ENST00000516942 93 ntBASIC3.03□□□□□ -1.92
LDB1Q86U70 RNU6-445P-201ENST00000516949 107 ntBASIC3.03□□□□□ -1.92
LDB1Q86U70 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC3.03□□□□□ -1.92
LDB1Q86U70 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC3.03□□□□□ -1.92
LDB1Q86U70 AP003392.2-201ENST00000527269 208 ntBASIC3.03□□□□□ -1.92
LDB1Q86U70 SARNP-203ENST00000552080 726 ntTSL 2 BASIC3.03□□□□□ -1.92
LDB1Q86U70 AC068135.2-201ENST00000569293 1028 ntBASIC3.03□□□□□ -1.92
LDB1Q86U70 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC3.03□□□□□ -1.92
LDB1Q86U70 AC091805.2-201ENST00000603848 235 ntBASIC3.03□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 138.6 ms