| SETD3 | Q86TU7 | CENPCP1-201 | ENST00000533085 | 2578 nt | BASIC | 2.05 | □□□□□ -2.08 | | |
| SETD3 | Q86TU7 | VIM-AS1-201 | ENST00000437232 | 1351 nt | TSL 2 BASIC | 2.05 | □□□□□ -2.08 | | |
| SETD3 | Q86TU7 | NDUFAF4-201 | ENST00000316149 | 2399 nt | APPRIS P1 TSL 1 (best) BASIC | 2.05 | □□□□□ -2.08 | | |
| SETD3 | Q86TU7 | RNU6-884P-201 | ENST00000363889 | 107 nt | BASIC | 2.04 | □□□□□ -2.08 | | |
| SETD3 | Q86TU7 | RNU6-343P-201 | ENST00000364709 | 104 nt | BASIC | 2.04 | □□□□□ -2.08 | | |
| SETD3 | Q86TU7 | AKAP14-203 | ENST00000371425 | 793 nt | APPRIS ALT2 TSL 5 BASIC | 2.04 | □□□□□ -2.08 | | |
| SETD3 | Q86TU7 | ZNF365-203 | ENST00000395249 | 433 nt | TSL 1 (best) BASIC | 2.04 | □□□□□ -2.08 | | |
| SETD3 | Q86TU7 | GSTA9P-201 | ENST00000406231 | 611 nt | BASIC | 2.04 | □□□□□ -2.08 | | |
| SETD3 | Q86TU7 | AC083867.1-201 | ENST00000413567 | 457 nt | TSL 3 BASIC | 2.04 | □□□□□ -2.08 | | |
| SETD3 | Q86TU7 | BX119904.4-201 | ENST00000424402 | 301 nt | BASIC | 2.04 | □□□□□ -2.08 | | |
| SETD3 | Q86TU7 | AC006369.2-201 | ENST00000431712 | 384 nt | TSL 3 BASIC | 2.04 | □□□□□ -2.08 | | |
| SETD3 | Q86TU7 | LINC01680-201 | ENST00000434983 | 299 nt | TSL 2 BASIC | 2.04 | □□□□□ -2.08 | | |
| SETD3 | Q86TU7 | USP9YP8-201 | ENST00000441913 | 500 nt | BASIC | 2.04 | □□□□□ -2.08 | | |
| SETD3 | Q86TU7 | AC021382.1-201 | ENST00000483523 | 359 nt | BASIC | 2.04 | □□□□□ -2.08 | | |
| SETD3 | Q86TU7 | AC092902.1-201 | ENST00000486999 | 259 nt | BASIC | 2.04 | □□□□□ -2.08 | | |
| SETD3 | Q86TU7 | AC104137.1-201 | ENST00000503625 | 385 nt | TSL 3 BASIC | 2.04 | □□□□□ -2.08 | | |
| SETD3 | Q86TU7 | YWHAEP4-201 | ENST00000505390 | 198 nt | BASIC | 2.04 | □□□□□ -2.08 | | |
| SETD3 | Q86TU7 | AC093772.1-201 | ENST00000513519 | 506 nt | TSL 2 BASIC | 2.04 | □□□□□ -2.08 | | |
| SETD3 | Q86TU7 | LINC02484-202 | ENST00000514877 | 546 nt | TSL 3 BASIC | 2.04 | □□□□□ -2.08 | | |
| SETD3 | Q86TU7 | LRRC6P1-201 | ENST00000532188 | 885 nt | BASIC | 2.04 | □□□□□ -2.08 | | |
| SETD3 | Q86TU7 | AL353997.4-201 | ENST00000586196 | 166 nt | BASIC | 2.04 | □□□□□ -2.08 | | |
| SETD3 | Q86TU7 | AC008277.1-203 | ENST00000594921 | 1149 nt | TSL 5 BASIC | 2.04 | □□□□□ -2.08 | | |
| SETD3 | Q86TU7 | AP000403.1-201 | ENST00000603349 | 851 nt | BASIC | 2.04 | □□□□□ -2.08 | | |
| SETD3 | Q86TU7 | AC007349.4-201 | ENST00000608114 | 532 nt | BASIC | 2.04 | □□□□□ -2.08 | | |
| SETD3 | Q86TU7 | AC004520.1-201 | ENST00000608362 | 1413 nt | BASIC | 2.04 | □□□□□ -2.08 | | |
| SETD3 | Q86TU7 | AC093673.2-201 | ENST00000609674 | 331 nt | BASIC | 2.04 | □□□□□ -2.08 | | |
| SETD3 | Q86TU7 | uc_338.20-201 | ENST00000621563 | 178 nt | BASIC | 2.04 | □□□□□ -2.08 | | |
| SETD3 | Q86TU7 | AC007527.2-201 | ENST00000621825 | 546 nt | TSL 5 BASIC | 2.04 | □□□□□ -2.08 | | |
| SETD3 | Q86TU7 | YWHAEP7-203 | ENST00000622054 | 312 nt | BASIC | 2.04 | □□□□□ -2.08 | | |
| SETD3 | Q86TU7 | OR1S1-201 | ENST00000624470 | 978 nt | BASIC | 2.04 | □□□□□ -2.08 | | |
| SETD3 | Q86TU7 | MIR7157-201 | ENST00000635801 | 60 nt | BASIC | 2.04 | □□□□□ -2.08 | | |
| SETD3 | Q86TU7 | RNU6-1207P-201 | ENST00000384343 | 107 nt | BASIC | 2.03 | □□□□□ -2.08 | | |
| SETD3 | Q86TU7 | SNORD23.1-201 | ENST00000408212 | 104 nt | BASIC | 2.03 | □□□□□ -2.08 | | |
| SETD3 | Q86TU7 | AL356379.1-201 | ENST00000414105 | 126 nt | BASIC | 2.03 | □□□□□ -2.08 | | |
| SETD3 | Q86TU7 | AL391839.1-201 | ENST00000417447 | 265 nt | TSL 2 BASIC | 2.03 | □□□□□ -2.08 | | |
| SETD3 | Q86TU7 | AL139118.1-201 | ENST00000432707 | 446 nt | TSL 3 BASIC | 2.03 | □□□□□ -2.08 | | |
| SETD3 | Q86TU7 | AP1S3-208 | ENST00000446015 | 499 nt | APPRIS ALT1 TSL 1 (best) BASIC | 2.03 | □□□□□ -2.08 | | |
| SETD3 | Q86TU7 | AC073326.1-201 | ENST00000451832 | 557 nt | TSL 3 BASIC | 2.03 | □□□□□ -2.08 | | |
| SETD3 | Q86TU7 | snoU13.26-201 | ENST00000459452 | 105 nt | BASIC | 2.03 | □□□□□ -2.08 | | |
| SETD3 | Q86TU7 | AC079203.1-201 | ENST00000487972 | 404 nt | BASIC | 2.03 | □□□□□ -2.08 | | |
| SETD3 | Q86TU7 | RPS29P20-201 | ENST00000489592 | 171 nt | BASIC | 2.03 | □□□□□ -2.08 | | |
| SETD3 | Q86TU7 | PGRMC2-204 | ENST00000503872 | 1028 nt | TSL 3 BASIC | 2.03 | □□□□□ -2.08 | | |
| SETD3 | Q86TU7 | CA1-215 | ENST00000522389 | 551 nt | TSL 3 BASIC | 2.03 | □□□□□ -2.08 | | |
| SETD3 | Q86TU7 | AC010186.2-204 | ENST00000537668 | 439 nt | BASIC | 2.03 | □□□□□ -2.08 | | |
| SETD3 | Q86TU7 | AC126407.1-201 | ENST00000563044 | 566 nt | TSL 4 BASIC | 2.03 | □□□□□ -2.08 | | |
| SETD3 | Q86TU7 | MIR5089-201 | ENST00000580047 | 84 nt | BASIC | 2.03 | □□□□□ -2.08 | | |
| SETD3 | Q86TU7 | AC025588.2-201 | ENST00000604851 | 466 nt | BASIC | 2.03 | □□□□□ -2.08 | | |
| SETD3 | Q86TU7 | AL450336.1-201 | ENST00000605180 | 586 nt | BASIC | 2.03 | □□□□□ -2.08 | | |
| SETD3 | Q86TU7 | AC009237.15-201 | ENST00000610252 | 501 nt | BASIC | 2.03 | □□□□□ -2.08 | | |
| SETD3 | Q86TU7 | AP003476.1-201 | ENST00000623984 | 516 nt | BASIC | 2.03 | □□□□□ -2.08 | | |
| SETD3 | Q86TU7 | SI-201 | ENST00000264382 | 6011 nt | APPRIS P1 TSL 1 (best) BASIC | 2.03 | □□□□□ -2.08 | | |
| SETD3 | Q86TU7 | AC009487.4-201 | ENST00000624969 | 3585 nt | BASIC | 2.03 | □□□□□ -2.09 | | |
| SETD3 | Q86TU7 | FAM133CP-201 | ENST00000332869 | 704 nt | BASIC | 2.02 | □□□□□ -2.09 | | |
| SETD3 | Q86TU7 | RNU1-39P-201 | ENST00000383897 | 165 nt | BASIC | 2.02 | □□□□□ -2.09 | | |
| SETD3 | Q86TU7 | AC019129.1-201 | ENST00000403786 | 261 nt | BASIC | 2.02 | □□□□□ -2.09 | | |
| SETD3 | Q86TU7 | AL590084.1-201 | ENST00000407885 | 387 nt | BASIC | 2.02 | □□□□□ -2.09 | | |
| SETD3 | Q86TU7 | RNU6-516P-201 | ENST00000411381 | 104 nt | BASIC | 2.02 | □□□□□ -2.09 | | |
| SETD3 | Q86TU7 | RPL17P12-201 | ENST00000413391 | 526 nt | BASIC | 2.02 | □□□□□ -2.09 | | |
| SETD3 | Q86TU7 | TIMM9P2-201 | ENST00000419324 | 266 nt | BASIC | 2.02 | □□□□□ -2.09 | | |
| SETD3 | Q86TU7 | AL451054.2-201 | ENST00000420896 | 202 nt | BASIC | 2.02 | □□□□□ -2.09 | | |
| SETD3 | Q86TU7 | AL161935.1-201 | ENST00000420945 | 421 nt | TSL 3 BASIC | 2.02 | □□□□□ -2.09 | | |
| SETD3 | Q86TU7 | BPY2DP-201 | ENST00000422208 | 265 nt | BASIC | 2.02 | □□□□□ -2.09 | | |
| SETD3 | Q86TU7 | AC113331.1-201 | ENST00000428160 | 869 nt | TSL 2 BASIC | 2.02 | □□□□□ -2.09 | | |
| SETD3 | Q86TU7 | AC003001.1-201 | ENST00000443247 | 1135 nt | TSL 5 BASIC | 2.02 | □□□□□ -2.09 | | |
| SETD3 | Q86TU7 | AC006042.4-201 | ENST00000451066 | 692 nt | TSL 5 BASIC | 2.02 | □□□□□ -2.09 | | |
| SETD3 | Q86TU7 | AC005703.2-201 | ENST00000453339 | 343 nt | TSL 2 BASIC | 2.02 | □□□□□ -2.09 | | |
| SETD3 | Q86TU7 | RPL12P25-201 | ENST00000455592 | 494 nt | BASIC | 2.02 | □□□□□ -2.09 | | |
| SETD3 | Q86TU7 | KLF3P2-201 | ENST00000465138 | 268 nt | BASIC | 2.02 | □□□□□ -2.09 | | |
| SETD3 | Q86TU7 | DYNLL1P5-201 | ENST00000467158 | 270 nt | BASIC | 2.02 | □□□□□ -2.09 | | |
| SETD3 | Q86TU7 | AC104563.1-201 | ENST00000476147 | 376 nt | BASIC | 2.02 | □□□□□ -2.09 | | |
| SETD3 | Q86TU7 | AC068587.2-201 | ENST00000478386 | 781 nt | BASIC | 2.02 | □□□□□ -2.09 | | |
| SETD3 | Q86TU7 | AC016550.1-201 | ENST00000505348 | 785 nt | BASIC | 2.02 | □□□□□ -2.09 | | |
| SETD3 | Q86TU7 | AC034226.1-201 | ENST00000506429 | 487 nt | TSL 2 BASIC | 2.02 | □□□□□ -2.09 | | |
| SETD3 | Q86TU7 | AC113347.3-201 | ENST00000509113 | 148 nt | BASIC | 2.02 | □□□□□ -2.09 | | |
| SETD3 | Q86TU7 | AC091887.1-201 | ENST00000514002 | 439 nt | TSL 5 BASIC | 2.02 | □□□□□ -2.09 | | |
| SETD3 | Q86TU7 | AC110296.1-201 | ENST00000515680 | 341 nt | TSL 3 BASIC | 2.02 | □□□□□ -2.09 | | |
| SETD3 | Q86TU7 | AC005832.3-201 | ENST00000537929 | 631 nt | BASIC | 2.02 | □□□□□ -2.09 | | |
| SETD3 | Q86TU7 | PPFIA2-AS1-205 | ENST00000550938 | 790 nt | TSL 3 BASIC | 2.02 | □□□□□ -2.09 | | |
| SETD3 | Q86TU7 | AL132657.2-201 | ENST00000564417 | 358 nt | BASIC | 2.02 | □□□□□ -2.09 | | |
| SETD3 | Q86TU7 | AC112220.2-201 | ENST00000605513 | 533 nt | BASIC | 2.02 | □□□□□ -2.09 | | |
| SETD3 | Q86TU7 | RNU6-1192P-201 | ENST00000612197 | 107 nt | BASIC | 2.02 | □□□□□ -2.09 | | |
| SETD3 | Q86TU7 | AC010133.1-201 | ENST00000615809 | 842 nt | BASIC | 2.02 | □□□□□ -2.09 | | |
| SETD3 | Q86TU7 | RNU6-489P-201 | ENST00000618289 | 107 nt | BASIC | 2.02 | □□□□□ -2.09 | | |
| SETD3 | Q86TU7 | AC126544.2-201 | ENST00000625174 | 749 nt | BASIC | 2.02 | □□□□□ -2.09 | | |
| SETD3 | Q86TU7 | AC019226.1-201 | ENST00000625666 | 515 nt | BASIC | 2.02 | □□□□□ -2.09 | | |
| SETD3 | Q86TU7 | GMFB-210 | ENST00000628554 | 639 nt | TSL 4 BASIC | 2.02 | □□□□□ -2.09 | | |
| SETD3 | Q86TU7 | SCN7A-206 | ENST00000619410 | 7186 nt | APPRIS P1 TSL 5 BASIC | 2.02 | □□□□□ -2.09 | | |
| SETD3 | Q86TU7 | SCN7A-207 | ENST00000621965 | 7186 nt | APPRIS P1 TSL 5 BASIC | 2.02 | □□□□□ -2.09 | | |
| SETD3 | Q86TU7 | KTN1-207 | ENST00000438792 | 4449 nt | APPRIS ALT2 TSL 5 BASIC | 2.02 | □□□□□ -2.09 | | |
| SETD3 | Q86TU7 | C8orf59-201 | ENST00000321777 | 325 nt | TSL 1 (best) BASIC | 2.01 | □□□□□ -2.09 | | |
| SETD3 | Q86TU7 | RNU6-754P-201 | ENST00000391166 | 107 nt | BASIC | 2.01 | □□□□□ -2.09 | | |
| SETD3 | Q86TU7 | RPL23AP29-201 | ENST00000397284 | 453 nt | BASIC | 2.01 | □□□□□ -2.09 | | |
| SETD3 | Q86TU7 | TXNP7-201 | ENST00000406296 | 293 nt | BASIC | 2.01 | □□□□□ -2.09 | | |
| SETD3 | Q86TU7 | CoTC_ribozyme.1-201 | ENST00000408104 | 192 nt | BASIC | 2.01 | □□□□□ -2.09 | | |
| SETD3 | Q86TU7 | MTND1P21-201 | ENST00000412991 | 285 nt | BASIC | 2.01 | □□□□□ -2.09 | | |
| SETD3 | Q86TU7 | AP000550.2-201 | ENST00000417463 | 774 nt | TSL 5 BASIC | 2.01 | □□□□□ -2.09 | | |
| SETD3 | Q86TU7 | USP9YP13-201 | ENST00000417797 | 480 nt | BASIC | 2.01 | □□□□□ -2.09 | | |
| SETD3 | Q86TU7 | LINC02559-201 | ENST00000420391 | 188 nt | TSL 2 BASIC | 2.01 | □□□□□ -2.09 | | |
| SETD3 | Q86TU7 | MED14P1-201 | ENST00000430517 | 648 nt | BASIC | 2.01 | □□□□□ -2.09 | | |
| SETD3 | Q86TU7 | AP000552.3-201 | ENST00000434730 | 775 nt | TSL 5 BASIC | 2.01 | □□□□□ -2.09 | | |