Protein–RNA interactions for Protein: Q7Z407

CSMD3, CUB and sushi domain-containing protein 3, humanhuman

Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3Q7Z407 AC099548.1-201ENST00000421443 426 ntBASIC0.67□□□□□ -2.3
CSMD3Q7Z407 MTND2P9-201ENST00000422293 931 ntBASIC0.67□□□□□ -2.3
CSMD3Q7Z407 AC098614.2-201ENST00000426040 255 ntBASIC0.67□□□□□ -2.3
CSMD3Q7Z407 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC0.67□□□□□ -2.3
CSMD3Q7Z407 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC0.67□□□□□ -2.3
CSMD3Q7Z407 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC0.67□□□□□ -2.3
CSMD3Q7Z407 RNU11-2P-201ENST00000516898 142 ntBASIC0.67□□□□□ -2.3
CSMD3Q7Z407 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC0.67□□□□□ -2.3
CSMD3Q7Z407 FAM60CP-201ENST00000591086 664 ntBASIC0.67□□□□□ -2.3
CSMD3Q7Z407 AC013468.1-201ENST00000608680 598 ntBASIC0.67□□□□□ -2.3
CSMD3Q7Z407 SDR42E1P2-201ENST00000614861 481 ntBASIC0.67□□□□□ -2.3
CSMD3Q7Z407 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC0.67□□□□□ -2.3
CSMD3Q7Z407 SDR42E1P4-201ENST00000620894 481 ntBASIC0.67□□□□□ -2.3
CSMD3Q7Z407 MIR6835-201ENST00000621552 64 ntBASIC0.67□□□□□ -2.3
CSMD3Q7Z407 AC090517.3-201ENST00000625170 141 ntBASIC0.67□□□□□ -2.3
CSMD3Q7Z407 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC0.67□□□□□ -2.3
CSMD3Q7Z407 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC0.67□□□□□ -2.3
CSMD3Q7Z407 BUD31P2-201ENST00000449374 300 ntBASIC0.67□□□□□ -2.3
CSMD3Q7Z407 RPS20P10-201ENST00000451209 253 ntBASIC0.67□□□□□ -2.3
CSMD3Q7Z407 AL031183.1-201ENST00000457667 207 ntBASIC0.67□□□□□ -2.3
CSMD3Q7Z407 snoU13.4-201ENST00000458916 104 ntBASIC0.67□□□□□ -2.3
CSMD3Q7Z407 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC0.67□□□□□ -2.3
CSMD3Q7Z407 AK3P2-201ENST00000507976 429 ntBASIC0.67□□□□□ -2.3
CSMD3Q7Z407 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC0.67□□□□□ -2.3
CSMD3Q7Z407 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC0.67□□□□□ -2.3
CSMD3Q7Z407 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC0.67□□□□□ -2.3
CSMD3Q7Z407 MIR3616-201ENST00000584070 92 ntBASIC0.67□□□□□ -2.3
CSMD3Q7Z407 MIR4658-201ENST00000584344 65 ntBASIC0.67□□□□□ -2.3
CSMD3Q7Z407 AC104365.3-201ENST00000587011 625 ntTSL 5 BASIC0.67□□□□□ -2.3
CSMD3Q7Z407 AC021749.1-201ENST00000604322 607 ntBASIC0.67□□□□□ -2.3
CSMD3Q7Z407 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC0.66□□□□□ -2.3
CSMD3Q7Z407 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC0.66□□□□□ -2.3
CSMD3Q7Z407 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC0.66□□□□□ -2.3
CSMD3Q7Z407 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC0.66□□□□□ -2.3
CSMD3Q7Z407 AC006548.1-201ENST00000427470 102 ntBASIC0.66□□□□□ -2.3
CSMD3Q7Z407 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC0.66□□□□□ -2.3
CSMD3Q7Z407 TRIM60P3Y-201ENST00000432201 673 ntBASIC0.66□□□□□ -2.3
CSMD3Q7Z407 NUCB2-202ENST00000458064 1279 ntTSL 1 (best) BASIC0.66□□□□□ -2.3
CSMD3Q7Z407 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC0.66□□□□□ -2.3
CSMD3Q7Z407 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC0.66□□□□□ -2.3
CSMD3Q7Z407 AC097491.1-201ENST00000507857 672 ntTSL 5 BASIC0.66□□□□□ -2.3
CSMD3Q7Z407 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC0.66□□□□□ -2.3
CSMD3Q7Z407 AP003497.1-201ENST00000528472 562 ntBASIC0.66□□□□□ -2.3
CSMD3Q7Z407 MIR4287-201ENST00000579398 78 ntBASIC0.66□□□□□ -2.3
CSMD3Q7Z407 HSPE1P7-201ENST00000604681 321 ntBASIC0.66□□□□□ -2.3
CSMD3Q7Z407 MIR8087-201ENST00000612745 78 ntBASIC0.66□□□□□ -2.3
CSMD3Q7Z407 CR381572.1-201ENST00000625098 102 ntBASIC0.66□□□□□ -2.3
CSMD3Q7Z407 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC0.66□□□□□ -2.3
CSMD3Q7Z407 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC0.66□□□□□ -2.3
CSMD3Q7Z407 OR8H1-201ENST00000313022 1038 ntAPPRIS P2 BASIC0.66□□□□□ -2.3
CSMD3Q7Z407 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC0.66□□□□□ -2.3
CSMD3Q7Z407 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC0.66□□□□□ -2.3
CSMD3Q7Z407 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC0.66□□□□□ -2.3
CSMD3Q7Z407 RNU6-185P-201ENST00000384421 107 ntBASIC0.66□□□□□ -2.3
CSMD3Q7Z407 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC0.66□□□□□ -2.3
CSMD3Q7Z407 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC0.66□□□□□ -2.3
CSMD3Q7Z407 HMGB1P22-201ENST00000505315 124 ntBASIC0.66□□□□□ -2.3
CSMD3Q7Z407 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC0.66□□□□□ -2.3
CSMD3Q7Z407 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC0.66□□□□□ -2.3
CSMD3Q7Z407 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC0.66□□□□□ -2.3
CSMD3Q7Z407 POLR2KP1-201ENST00000553226 168 ntBASIC0.66□□□□□ -2.3
CSMD3Q7Z407 AP003072.5-201ENST00000623872 773 ntBASIC0.66□□□□□ -2.3
CSMD3Q7Z407 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC0.66□□□□□ -2.3
CSMD3Q7Z407 U3.29-201ENST00000391296 212 ntBASIC0.66□□□□□ -2.3
CSMD3Q7Z407 AC019070.1-201ENST00000415008 1024 ntBASIC0.66□□□□□ -2.3
CSMD3Q7Z407 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC0.66□□□□□ -2.3
CSMD3Q7Z407 COX6CP18-201ENST00000448769 222 ntBASIC0.66□□□□□ -2.3
CSMD3Q7Z407 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC0.66□□□□□ -2.3
CSMD3Q7Z407 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC0.66□□□□□ -2.3
CSMD3Q7Z407 NDUFB4P2-201ENST00000509515 391 ntBASIC0.66□□□□□ -2.3
CSMD3Q7Z407 AC016065.2-201ENST00000514530 444 ntBASIC0.66□□□□□ -2.3
CSMD3Q7Z407 RNU2-44P-201ENST00000516795 194 ntBASIC0.66□□□□□ -2.3
CSMD3Q7Z407 APOOP3-201ENST00000536787 586 ntBASIC0.66□□□□□ -2.3
CSMD3Q7Z407 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC0.66□□□□□ -2.3
CSMD3Q7Z407 CR848007.1-201ENST00000442354 1699 ntBASIC0.66□□□□□ -2.3
CSMD3Q7Z407 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC0.65□□□□□ -2.3
CSMD3Q7Z407 AL356320.2-201ENST00000417263 507 ntBASIC0.65□□□□□ -2.3
CSMD3Q7Z407 HMGB1P9-201ENST00000429856 646 ntBASIC0.65□□□□□ -2.3
CSMD3Q7Z407 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC0.65□□□□□ -2.3
CSMD3Q7Z407 USP9YP35-201ENST00000435696 412 ntBASIC0.65□□□□□ -2.3
CSMD3Q7Z407 AC016691.1-201ENST00000441321 413 ntBASIC0.65□□□□□ -2.3
CSMD3Q7Z407 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC0.65□□□□□ -2.3
CSMD3Q7Z407 AL034418.1-201ENST00000448675 860 ntBASIC0.65□□□□□ -2.3
CSMD3Q7Z407 SNRPGP6-201ENST00000451124 220 ntBASIC0.65□□□□□ -2.3
CSMD3Q7Z407 RNF138P1-201ENST00000502765 546 ntBASIC0.65□□□□□ -2.3
CSMD3Q7Z407 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC0.65□□□□□ -2.3
CSMD3Q7Z407 HMGB3P3-201ENST00000510526 400 ntBASIC0.65□□□□□ -2.3
CSMD3Q7Z407 AC008562.1-201ENST00000521763 330 ntBASIC0.65□□□□□ -2.3
CSMD3Q7Z407 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC0.65□□□□□ -2.3
CSMD3Q7Z407 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC0.65□□□□□ -2.3
CSMD3Q7Z407 AC005034.5-201ENST00000604219 466 ntBASIC0.65□□□□□ -2.3
CSMD3Q7Z407 FAM71BP1-201ENST00000604431 523 ntBASIC0.65□□□□□ -2.3
CSMD3Q7Z407 DPRXP5-201ENST00000604662 539 ntBASIC0.65□□□□□ -2.3
CSMD3Q7Z407 AC109809.1-201ENST00000619665 545 ntBASIC0.65□□□□□ -2.3
CSMD3Q7Z407 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC0.65□□□□□ -2.3
CSMD3Q7Z407 AL049737.1-201ENST00000413920 1403 ntBASIC0.65□□□□□ -2.31
CSMD3Q7Z407 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC0.65□□□□□ -2.31
CSMD3Q7Z407 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC0.65□□□□□ -2.31
CSMD3Q7Z407 MIR144-201ENST00000384886 86 ntBASIC0.65□□□□□ -2.31
CSMD3Q7Z407 RPS20P15-201ENST00000412792 311 ntBASIC0.65□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 104.4 ms