Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 RNA5SP455-201ENST00000365190 119 ntBASIC5.08□□□□□ -1.6
LYSMD3Q7Z3D4 RNU6-449P-201ENST00000383914 107 ntBASIC5.08□□□□□ -1.6
LYSMD3Q7Z3D4 SNORA36C-201ENST00000384289 132 ntBASIC5.08□□□□□ -1.6
LYSMD3Q7Z3D4 RNU6ATAC7P-201ENST00000408111 127 ntBASIC5.08□□□□□ -1.6
LYSMD3Q7Z3D4 RN7SKP16-201ENST00000410180 299 ntBASIC5.08□□□□□ -1.6
LYSMD3Q7Z3D4 RPL37P18-201ENST00000411602 243 ntBASIC5.08□□□□□ -1.6
LYSMD3Q7Z3D4 AL158156.1-201ENST00000422509 473 ntBASIC5.08□□□□□ -1.6
LYSMD3Q7Z3D4 AL590762.4-201ENST00000425885 253 ntBASIC5.08□□□□□ -1.6
LYSMD3Q7Z3D4 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC5.08□□□□□ -1.6
LYSMD3Q7Z3D4 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC5.08□□□□□ -1.6
LYSMD3Q7Z3D4 AC007395.1-201ENST00000451333 677 ntBASIC5.08□□□□□ -1.6
LYSMD3Q7Z3D4 AC087588.1-201ENST00000462203 316 ntBASIC5.08□□□□□ -1.6
LYSMD3Q7Z3D4 AL160314.1-201ENST00000490836 438 ntBASIC5.08□□□□□ -1.6
LYSMD3Q7Z3D4 AC004980.4-201ENST00000513375 203 ntBASIC5.08□□□□□ -1.6
LYSMD3Q7Z3D4 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC5.08□□□□□ -1.6
LYSMD3Q7Z3D4 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC5.08□□□□□ -1.6
LYSMD3Q7Z3D4 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC5.08□□□□□ -1.6
LYSMD3Q7Z3D4 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC5.08□□□□□ -1.6
LYSMD3Q7Z3D4 AK6P2-201ENST00000549020 471 ntBASIC5.08□□□□□ -1.6
LYSMD3Q7Z3D4 AC005476.1-201ENST00000554427 397 ntBASIC5.08□□□□□ -1.6
LYSMD3Q7Z3D4 RPL21P9-201ENST00000556149 474 ntBASIC5.08□□□□□ -1.6
LYSMD3Q7Z3D4 BNIP3P5-201ENST00000562290 498 ntBASIC5.08□□□□□ -1.6
LYSMD3Q7Z3D4 AL390726.5-202ENST00000564800 256 ntBASIC5.08□□□□□ -1.6
LYSMD3Q7Z3D4 MIR4423-201ENST00000580922 80 ntBASIC5.08□□□□□ -1.6
LYSMD3Q7Z3D4 AC105254.2-201ENST00000603636 436 ntBASIC5.08□□□□□ -1.6
LYSMD3Q7Z3D4 AL139395.1-201ENST00000603662 160 ntBASIC5.08□□□□□ -1.6
LYSMD3Q7Z3D4 AC107294.1-201ENST00000609524 467 ntBASIC5.08□□□□□ -1.6
LYSMD3Q7Z3D4 AL591926.8-201ENST00000616876 211 ntBASIC5.08□□□□□ -1.6
LYSMD3Q7Z3D4 AL360181.4-201ENST00000621752 134 ntBASIC5.08□□□□□ -1.6
LYSMD3Q7Z3D4 MIR4496-201ENST00000635896 61 ntBASIC5.08□□□□□ -1.6
LYSMD3Q7Z3D4 IGHVIII-44-202ENST00000636235 289 ntBASIC5.08□□□□□ -1.6
LYSMD3Q7Z3D4 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC5.08□□□□□ -1.6
LYSMD3Q7Z3D4 AC005005.4-201ENST00000623789 16698 ntBASIC5.08□□□□□ -1.6
LYSMD3Q7Z3D4 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
LYSMD3Q7Z3D4 AL022322.2-201ENST00000624072 20397 ntBASIC5.08□□□□□ -1.6
LYSMD3Q7Z3D4 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
LYSMD3Q7Z3D4 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC5.08□□□□□ -1.6
LYSMD3Q7Z3D4 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
LYSMD3Q7Z3D4 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
LYSMD3Q7Z3D4 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC5.07□□□□□ -1.6
LYSMD3Q7Z3D4 ST7-212ENST00000422922 1887 ntTSL 5 BASIC5.07□□□□□ -1.6
LYSMD3Q7Z3D4 MIR410-201ENST00000362222 80 ntBASIC5.07□□□□□ -1.6
LYSMD3Q7Z3D4 Y_RNA.215-201ENST00000364204 112 ntBASIC5.07□□□□□ -1.6
LYSMD3Q7Z3D4 SNORD14B-201ENST00000364533 90 ntBASIC5.07□□□□□ -1.6
LYSMD3Q7Z3D4 Y_RNA.273-201ENST00000364703 102 ntBASIC5.07□□□□□ -1.6
LYSMD3Q7Z3D4 Y_RNA.446-201ENST00000384178 104 ntBASIC5.07□□□□□ -1.6
LYSMD3Q7Z3D4 MIR186-201ENST00000384988 86 ntBASIC5.07□□□□□ -1.6
LYSMD3Q7Z3D4 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
LYSMD3Q7Z3D4 RPS4XP3-201ENST00000398541 413 ntBASIC5.07□□□□□ -1.6
LYSMD3Q7Z3D4 MIR1250-201ENST00000408098 113 ntBASIC5.07□□□□□ -1.6
LYSMD3Q7Z3D4 SNORA77-201ENST00000408716 125 ntBASIC5.07□□□□□ -1.6
LYSMD3Q7Z3D4 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC5.07□□□□□ -1.6
LYSMD3Q7Z3D4 OOSP1P1-201ENST00000423265 274 ntBASIC5.07□□□□□ -1.6
LYSMD3Q7Z3D4 AC008065.1-201ENST00000428525 348 ntBASIC5.07□□□□□ -1.6
LYSMD3Q7Z3D4 COX6CP13-201ENST00000428703 226 ntBASIC5.07□□□□□ -1.6
LYSMD3Q7Z3D4 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC5.07□□□□□ -1.6
LYSMD3Q7Z3D4 RPL7AP61-201ENST00000443410 636 ntBASIC5.07□□□□□ -1.6
LYSMD3Q7Z3D4 AC073901.1-201ENST00000462471 408 ntBASIC5.07□□□□□ -1.6
LYSMD3Q7Z3D4 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC5.07□□□□□ -1.6
LYSMD3Q7Z3D4 AC084851.1-201ENST00000529105 249 ntBASIC5.07□□□□□ -1.6
LYSMD3Q7Z3D4 MIR4691-201ENST00000583764 85 ntBASIC5.07□□□□□ -1.6
LYSMD3Q7Z3D4 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC5.07□□□□□ -1.6
LYSMD3Q7Z3D4 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC5.07□□□□□ -1.6
LYSMD3Q7Z3D4 Mico1.1-201ENST00000611698 204 ntBASIC5.07□□□□□ -1.6
LYSMD3Q7Z3D4 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
LYSMD3Q7Z3D4 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
LYSMD3Q7Z3D4 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC5.07□□□□□ -1.6
LYSMD3Q7Z3D4 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
LYSMD3Q7Z3D4 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
LYSMD3Q7Z3D4 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
LYSMD3Q7Z3D4 FAP-203ENST00000443424 2598 ntTSL 2 BASIC5.07□□□□□ -1.6
LYSMD3Q7Z3D4 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
LYSMD3Q7Z3D4 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC5.06□□□□□ -1.6
LYSMD3Q7Z3D4 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
LYSMD3Q7Z3D4 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC5.06□□□□□ -1.6
LYSMD3Q7Z3D4 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
LYSMD3Q7Z3D4 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
LYSMD3Q7Z3D4 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
LYSMD3Q7Z3D4 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC5.06□□□□□ -1.6
LYSMD3Q7Z3D4 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
LYSMD3Q7Z3D4 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
LYSMD3Q7Z3D4 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC5.06□□□□□ -1.6
LYSMD3Q7Z3D4 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC5.06□□□□□ -1.6
LYSMD3Q7Z3D4 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
LYSMD3Q7Z3D4 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC5.06□□□□□ -1.6
LYSMD3Q7Z3D4 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
LYSMD3Q7Z3D4 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
LYSMD3Q7Z3D4 RNU5A-1-201ENST00000362698 116 ntBASIC5.06□□□□□ -1.6
LYSMD3Q7Z3D4 RNU6-1249P-201ENST00000363237 111 ntBASIC5.06□□□□□ -1.6
LYSMD3Q7Z3D4 RNU6-879P-201ENST00000364328 108 ntBASIC5.06□□□□□ -1.6
LYSMD3Q7Z3D4 RNU6-153P-201ENST00000364422 104 ntBASIC5.06□□□□□ -1.6
LYSMD3Q7Z3D4 Y_RNA.261-201ENST00000364631 102 ntBASIC5.06□□□□□ -1.6
LYSMD3Q7Z3D4 RNU4-9P-201ENST00000364951 139 ntBASIC5.06□□□□□ -1.6
LYSMD3Q7Z3D4 SNORA66-201ENST00000384792 133 ntBASIC5.06□□□□□ -1.6
LYSMD3Q7Z3D4 RNU6-882P-201ENST00000391025 103 ntBASIC5.06□□□□□ -1.6
LYSMD3Q7Z3D4 MIR1271-201ENST00000408537 86 ntBASIC5.06□□□□□ -1.6
LYSMD3Q7Z3D4 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC5.06□□□□□ -1.6
LYSMD3Q7Z3D4 RPS15AP7-201ENST00000439294 405 ntBASIC5.06□□□□□ -1.6
LYSMD3Q7Z3D4 AL354714.3-201ENST00000447284 493 ntBASIC5.06□□□□□ -1.6
LYSMD3Q7Z3D4 UQCRBP2-201ENST00000447827 297 ntBASIC5.06□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 118.3 ms