Protein–RNA interactions for Protein: Q6ZW05

PTCHD4, Patched domain-containing protein 4, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4Q6ZW05 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC3.54□□□□□ -1.84
PTCHD4Q6ZW05 AL355375.2-201ENST00000574825 175 ntBASIC3.54□□□□□ -1.84
PTCHD4Q6ZW05 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC3.54□□□□□ -1.84
PTCHD4Q6ZW05 MIR3942-201ENST00000585264 109 ntBASIC3.54□□□□□ -1.84
PTCHD4Q6ZW05 AC002545.1-201ENST00000592511 181 ntBASIC3.54□□□□□ -1.84
PTCHD4Q6ZW05 MIR15A-201ENST00000607334 83 ntBASIC3.54□□□□□ -1.84
PTCHD4Q6ZW05 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC3.54□□□□□ -1.84
PTCHD4Q6ZW05 AC135507.2-201ENST00000612443 309 ntBASIC3.54□□□□□ -1.84
PTCHD4Q6ZW05 AC104237.2-201ENST00000612456 443 ntBASIC3.54□□□□□ -1.84
PTCHD4Q6ZW05 AC034102.8-201ENST00000615146 484 ntBASIC3.54□□□□□ -1.84
PTCHD4Q6ZW05 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
PTCHD4Q6ZW05 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.54□□□□□ -1.84
PTCHD4Q6ZW05 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3.54□□□□□ -1.84
PTCHD4Q6ZW05 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
PTCHD4Q6ZW05 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.54□□□□□ -1.84
PTCHD4Q6ZW05 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.54□□□□□ -1.84
PTCHD4Q6ZW05 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
PTCHD4Q6ZW05 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
PTCHD4Q6ZW05 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC3.53□□□□□ -1.84
PTCHD4Q6ZW05 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
PTCHD4Q6ZW05 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
PTCHD4Q6ZW05 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC3.53□□□□□ -1.84
PTCHD4Q6ZW05 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
PTCHD4Q6ZW05 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
PTCHD4Q6ZW05 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC3.53□□□□□ -1.84
PTCHD4Q6ZW05 AC005183.1-201ENST00000603687 1979 ntBASIC3.53□□□□□ -1.84
PTCHD4Q6ZW05 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
PTCHD4Q6ZW05 RNU4-79P-201ENST00000362764 141 ntBASIC3.53□□□□□ -1.84
PTCHD4Q6ZW05 RNU4-76P-201ENST00000364509 141 ntBASIC3.53□□□□□ -1.84
PTCHD4Q6ZW05 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
PTCHD4Q6ZW05 RNU6-393P-201ENST00000384475 107 ntBASIC3.53□□□□□ -1.84
PTCHD4Q6ZW05 AC080125.1-201ENST00000414888 684 ntBASIC3.53□□□□□ -1.84
PTCHD4Q6ZW05 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC3.53□□□□□ -1.84
PTCHD4Q6ZW05 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
PTCHD4Q6ZW05 BTF3L4P3-201ENST00000418879 476 ntBASIC3.53□□□□□ -1.84
PTCHD4Q6ZW05 BX842559.1-201ENST00000419615 532 ntBASIC3.53□□□□□ -1.84
PTCHD4Q6ZW05 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC3.53□□□□□ -1.84
PTCHD4Q6ZW05 RPL18P10-201ENST00000425606 538 ntBASIC3.53□□□□□ -1.84
PTCHD4Q6ZW05 AC091390.3-201ENST00000426478 338 ntBASIC3.53□□□□□ -1.84
PTCHD4Q6ZW05 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC3.53□□□□□ -1.84
PTCHD4Q6ZW05 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC3.53□□□□□ -1.84
PTCHD4Q6ZW05 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC3.53□□□□□ -1.84
PTCHD4Q6ZW05 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC3.53□□□□□ -1.84
PTCHD4Q6ZW05 DYNLL1P5-201ENST00000467158 270 ntBASIC3.53□□□□□ -1.84
PTCHD4Q6ZW05 AL132838.2-201ENST00000492041 314 ntBASIC3.53□□□□□ -1.84
PTCHD4Q6ZW05 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC3.53□□□□□ -1.84
PTCHD4Q6ZW05 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC3.53□□□□□ -1.84
PTCHD4Q6ZW05 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
PTCHD4Q6ZW05 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.53□□□□□ -1.84
PTCHD4Q6ZW05 AL359273.1-201ENST00000510918 627 ntBASIC3.53□□□□□ -1.84
PTCHD4Q6ZW05 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC3.53□□□□□ -1.84
PTCHD4Q6ZW05 MEPE-206ENST00000511670 550 ntTSL 4 BASIC3.53□□□□□ -1.84
PTCHD4Q6ZW05 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC3.53□□□□□ -1.84
PTCHD4Q6ZW05 RNU6-864P-201ENST00000516256 108 ntBASIC3.53□□□□□ -1.84
PTCHD4Q6ZW05 SNORA31.8-201ENST00000516327 108 ntBASIC3.53□□□□□ -1.84
PTCHD4Q6ZW05 RNU6-273P-201ENST00000516937 96 ntBASIC3.53□□□□□ -1.84
PTCHD4Q6ZW05 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
PTCHD4Q6ZW05 HPRT1P3-201ENST00000539521 576 ntBASIC3.53□□□□□ -1.84
PTCHD4Q6ZW05 AC091516.1-201ENST00000549191 703 ntBASIC3.53□□□□□ -1.84
PTCHD4Q6ZW05 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC3.53□□□□□ -1.84
PTCHD4Q6ZW05 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC3.53□□□□□ -1.84
PTCHD4Q6ZW05 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC3.53□□□□□ -1.84
PTCHD4Q6ZW05 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.53□□□□□ -1.84
PTCHD4Q6ZW05 ATP1B3P1-201ENST00000605365 821 ntBASIC3.53□□□□□ -1.84
PTCHD4Q6ZW05 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC3.53□□□□□ -1.84
PTCHD4Q6ZW05 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC3.53□□□□□ -1.84
PTCHD4Q6ZW05 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC3.53□□□□□ -1.84
PTCHD4Q6ZW05 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
PTCHD4Q6ZW05 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.52□□□□□ -1.85
PTCHD4Q6ZW05 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
PTCHD4Q6ZW05 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
PTCHD4Q6ZW05 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
PTCHD4Q6ZW05 UBE2L2-201ENST00000254302 429 ntBASIC3.52□□□□□ -1.85
PTCHD4Q6ZW05 Y_RNA.301-201ENST00000364990 103 ntBASIC3.52□□□□□ -1.85
PTCHD4Q6ZW05 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
PTCHD4Q6ZW05 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
PTCHD4Q6ZW05 MIR937-201ENST00000401271 86 ntBASIC3.52□□□□□ -1.85
PTCHD4Q6ZW05 AL590704.1-201ENST00000402856 794 ntBASIC3.52□□□□□ -1.85
PTCHD4Q6ZW05 Z98941.1-201ENST00000407764 100 ntBASIC3.52□□□□□ -1.85
PTCHD4Q6ZW05 AC108032.1-201ENST00000416706 207 ntBASIC3.52□□□□□ -1.85
PTCHD4Q6ZW05 NCOR1P3-201ENST00000420479 303 ntBASIC3.52□□□□□ -1.85
PTCHD4Q6ZW05 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.52□□□□□ -1.85
PTCHD4Q6ZW05 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC3.52□□□□□ -1.85
PTCHD4Q6ZW05 ACTR3BP6-201ENST00000422332 1241 ntBASIC3.52□□□□□ -1.85
PTCHD4Q6ZW05 AL451062.2-201ENST00000427515 271 ntBASIC3.52□□□□□ -1.85
PTCHD4Q6ZW05 AL669831.1-202ENST00000428504 417 ntBASIC3.52□□□□□ -1.85
PTCHD4Q6ZW05 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC3.52□□□□□ -1.85
PTCHD4Q6ZW05 AL591704.1-201ENST00000432574 275 ntBASIC3.52□□□□□ -1.85
PTCHD4Q6ZW05 GTF2IP13-201ENST00000438487 386 ntBASIC3.52□□□□□ -1.85
PTCHD4Q6ZW05 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC3.52□□□□□ -1.85
PTCHD4Q6ZW05 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC3.52□□□□□ -1.85
PTCHD4Q6ZW05 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC3.52□□□□□ -1.85
PTCHD4Q6ZW05 AC233279.1-201ENST00000455300 423 ntBASIC3.52□□□□□ -1.85
PTCHD4Q6ZW05 HIGD1AP13-201ENST00000509878 289 ntBASIC3.52□□□□□ -1.85
PTCHD4Q6ZW05 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC3.52□□□□□ -1.85
PTCHD4Q6ZW05 TBCAP3-201ENST00000512475 312 ntBASIC3.52□□□□□ -1.85
PTCHD4Q6ZW05 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC3.52□□□□□ -1.85
PTCHD4Q6ZW05 Y_RNA.691-201ENST00000516611 103 ntBASIC3.52□□□□□ -1.85
PTCHD4Q6ZW05 RNU6-914P-201ENST00000516749 109 ntBASIC3.52□□□□□ -1.85
PTCHD4Q6ZW05 RNA5SP471-201ENST00000516971 106 ntBASIC3.52□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 100.6 ms