Protein–RNA interactions for Protein: Q6ZNA4

RNF111, E3 ubiquitin-protein ligase Arkadia, humanhuman

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF111Q6ZNA4 RNA5SP513-201ENST00000364648 118 ntBASIC4.34□□□□□ -1.71
RNF111Q6ZNA4 RNU6-1074P-201ENST00000383995 104 ntBASIC4.34□□□□□ -1.71
RNF111Q6ZNA4 MIR585-201ENST00000384887 94 ntBASIC4.34□□□□□ -1.71
RNF111Q6ZNA4 RN7SKP106-201ENST00000410832 272 ntBASIC4.34□□□□□ -1.71
RNF111Q6ZNA4 RNU2-38P-201ENST00000410856 79 ntBASIC4.34□□□□□ -1.71
RNF111Q6ZNA4 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC4.34□□□□□ -1.71
RNF111Q6ZNA4 RBMY1KP-201ENST00000423480 476 ntBASIC4.34□□□□□ -1.71
RNF111Q6ZNA4 AC079780.1-201ENST00000428259 207 ntBASIC4.34□□□□□ -1.71
RNF111Q6ZNA4 TRAPPC2P9-201ENST00000434556 343 ntBASIC4.34□□□□□ -1.71
RNF111Q6ZNA4 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC4.34□□□□□ -1.71
RNF111Q6ZNA4 NIP7P2-201ENST00000485801 544 ntBASIC4.34□□□□□ -1.71
RNF111Q6ZNA4 RPL36AP41-201ENST00000493820 306 ntBASIC4.34□□□□□ -1.71
RNF111Q6ZNA4 AC025445.1-201ENST00000502728 300 ntBASIC4.34□□□□□ -1.71
RNF111Q6ZNA4 RNU6-397P-201ENST00000516226 104 ntBASIC4.34□□□□□ -1.71
RNF111Q6ZNA4 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC4.34□□□□□ -1.71
RNF111Q6ZNA4 AL121603.1-201ENST00000553815 142 ntBASIC4.34□□□□□ -1.71
RNF111Q6ZNA4 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC4.34□□□□□ -1.71
RNF111Q6ZNA4 CYP4A43P-201ENST00000568156 121 ntBASIC4.34□□□□□ -1.71
RNF111Q6ZNA4 MIR3128-201ENST00000581957 66 ntBASIC4.34□□□□□ -1.71
RNF111Q6ZNA4 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC4.34□□□□□ -1.71
RNF111Q6ZNA4 AL365434.2-201ENST00000607979 234 ntBASIC4.34□□□□□ -1.71
RNF111Q6ZNA4 AL138721.1-201ENST00000616756 179 ntBASIC4.34□□□□□ -1.71
RNF111Q6ZNA4 U3.53-201ENST00000628922 216 ntBASIC4.34□□□□□ -1.71
RNF111Q6ZNA4 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC4.34□□□□□ -1.71
RNF111Q6ZNA4 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
RNF111Q6ZNA4 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
RNF111Q6ZNA4 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC4.34□□□□□ -1.71
RNF111Q6ZNA4 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.34□□□□□ -1.71
RNF111Q6ZNA4 ZNF137P-201ENST00000456718 1920 ntBASIC4.34□□□□□ -1.71
RNF111Q6ZNA4 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
RNF111Q6ZNA4 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.34□□□□□ -1.72
RNF111Q6ZNA4 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
RNF111Q6ZNA4 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
RNF111Q6ZNA4 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC4.33□□□□□ -1.72
RNF111Q6ZNA4 AC032011.1-201ENST00000611703 1549 ntBASIC4.33□□□□□ -1.72
RNF111Q6ZNA4 Y_RNA.60-201ENST00000362831 98 ntBASIC4.33□□□□□ -1.72
RNF111Q6ZNA4 Y_RNA.376-201ENST00000365638 108 ntBASIC4.33□□□□□ -1.72
RNF111Q6ZNA4 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC4.33□□□□□ -1.72
RNF111Q6ZNA4 RNU6-209P-201ENST00000384118 107 ntBASIC4.33□□□□□ -1.72
RNF111Q6ZNA4 Y_RNA.477-201ENST00000384352 108 ntBASIC4.33□□□□□ -1.72
RNF111Q6ZNA4 SNORA51.11-201ENST00000384442 131 ntBASIC4.33□□□□□ -1.72
RNF111Q6ZNA4 RNU1-44P-201ENST00000384453 163 ntBASIC4.33□□□□□ -1.72
RNF111Q6ZNA4 Y_RNA.551-201ENST00000384661 102 ntBASIC4.33□□□□□ -1.72
RNF111Q6ZNA4 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
RNF111Q6ZNA4 AL513475.1-201ENST00000406602 315 ntBASIC4.33□□□□□ -1.72
RNF111Q6ZNA4 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC4.33□□□□□ -1.72
RNF111Q6ZNA4 AC073264.2-201ENST00000448886 166 ntBASIC4.33□□□□□ -1.72
RNF111Q6ZNA4 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC4.33□□□□□ -1.72
RNF111Q6ZNA4 AC010326.1-201ENST00000462726 602 ntBASIC4.33□□□□□ -1.72
RNF111Q6ZNA4 RPL12P20-201ENST00000475538 479 ntBASIC4.33□□□□□ -1.72
RNF111Q6ZNA4 RPS26P15-201ENST00000488067 348 ntBASIC4.33□□□□□ -1.72
RNF111Q6ZNA4 IGLV2-34-201ENST00000490007 283 ntBASIC4.33□□□□□ -1.72
RNF111Q6ZNA4 AC022493.1-201ENST00000492984 337 ntBASIC4.33□□□□□ -1.72
RNF111Q6ZNA4 AC093852.1-201ENST00000503587 266 ntBASIC4.33□□□□□ -1.72
RNF111Q6ZNA4 VN1R104P-201ENST00000505115 1009 ntBASIC4.33□□□□□ -1.72
RNF111Q6ZNA4 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC4.33□□□□□ -1.72
RNF111Q6ZNA4 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
RNF111Q6ZNA4 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC4.33□□□□□ -1.72
RNF111Q6ZNA4 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC4.33□□□□□ -1.72
RNF111Q6ZNA4 AC026470.2-201ENST00000561492 181 ntBASIC4.33□□□□□ -1.72
RNF111Q6ZNA4 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC4.33□□□□□ -1.72
RNF111Q6ZNA4 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC4.33□□□□□ -1.72
RNF111Q6ZNA4 MIR4458-201ENST00000578872 75 ntBASIC4.33□□□□□ -1.72
RNF111Q6ZNA4 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC4.33□□□□□ -1.72
RNF111Q6ZNA4 FP236240.3-201ENST00000623061 327 ntBASIC4.33□□□□□ -1.72
RNF111Q6ZNA4 TEX41-280ENST00000629185 591 ntTSL 5 BASIC4.33□□□□□ -1.72
RNF111Q6ZNA4 AL133243.3-201ENST00000617415 3004 ntBASIC4.33□□□□□ -1.72
RNF111Q6ZNA4 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
RNF111Q6ZNA4 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
RNF111Q6ZNA4 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC4.33□□□□□ -1.72
RNF111Q6ZNA4 MAPK10-286ENST00000641208 8747 ntBASIC4.33□□□□□ -1.72
RNF111Q6ZNA4 AC009812.4-201ENST00000569134 1805 ntBASIC4.32□□□□□ -1.72
RNF111Q6ZNA4 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
RNF111Q6ZNA4 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
RNF111Q6ZNA4 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
RNF111Q6ZNA4 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
RNF111Q6ZNA4 RNU1-15P-201ENST00000353977 144 ntBASIC4.32□□□□□ -1.72
RNF111Q6ZNA4 RNU6-356P-201ENST00000384140 107 ntBASIC4.32□□□□□ -1.72
RNF111Q6ZNA4 Y_RNA.533-201ENST00000384596 114 ntBASIC4.32□□□□□ -1.72
RNF111Q6ZNA4 MIR625-201ENST00000385047 85 ntBASIC4.32□□□□□ -1.72
RNF111Q6ZNA4 MIR548I3-201ENST00000408378 149 ntBASIC4.32□□□□□ -1.72
RNF111Q6ZNA4 MIR548I1-201ENST00000408810 149 ntBASIC4.32□□□□□ -1.72
RNF111Q6ZNA4 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC4.32□□□□□ -1.72
RNF111Q6ZNA4 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC4.32□□□□□ -1.72
RNF111Q6ZNA4 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
RNF111Q6ZNA4 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
RNF111Q6ZNA4 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC4.32□□□□□ -1.72
RNF111Q6ZNA4 HSPE1P6-201ENST00000479457 291 ntBASIC4.32□□□□□ -1.72
RNF111Q6ZNA4 AL049874.1-201ENST00000489560 388 ntBASIC4.32□□□□□ -1.72
RNF111Q6ZNA4 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC4.32□□□□□ -1.72
RNF111Q6ZNA4 SNORA25.11-201ENST00000515935 105 ntBASIC4.32□□□□□ -1.72
RNF111Q6ZNA4 RNU6-927P-201ENST00000516199 100 ntBASIC4.32□□□□□ -1.72
RNF111Q6ZNA4 SNORA40.15-201ENST00000516884 107 ntBASIC4.32□□□□□ -1.72
RNF111Q6ZNA4 RNU6-143P-201ENST00000516942 93 ntBASIC4.32□□□□□ -1.72
RNF111Q6ZNA4 OR5D17P-201ENST00000531492 978 ntBASIC4.32□□□□□ -1.72
RNF111Q6ZNA4 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC4.32□□□□□ -1.72
RNF111Q6ZNA4 AC090517.1-201ENST00000569307 266 ntBASIC4.32□□□□□ -1.72
RNF111Q6ZNA4 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
RNF111Q6ZNA4 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC4.32□□□□□ -1.72
RNF111Q6ZNA4 VN1R91P-201ENST00000594377 169 ntBASIC4.32□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 109.1 ms