Protein–RNA interactions for Protein: Q6PD62

CTR9, RNA polymerase-associated protein CTR9 homolog, humanhuman

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9Q6PD62 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
CTR9Q6PD62 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC3.09□□□□□ -1.91
CTR9Q6PD62 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
CTR9Q6PD62 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
CTR9Q6PD62 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC3.09□□□□□ -1.91
CTR9Q6PD62 U3.4-201ENST00000363352 213 ntBASIC3.09□□□□□ -1.91
CTR9Q6PD62 SNORA23-201ENST00000365128 182 ntBASIC3.09□□□□□ -1.91
CTR9Q6PD62 RNU6-432P-201ENST00000384196 109 ntBASIC3.09□□□□□ -1.91
CTR9Q6PD62 SNORD116-1-201ENST00000384335 95 ntBASIC3.09□□□□□ -1.91
CTR9Q6PD62 USP9YP20-201ENST00000419224 558 ntBASIC3.09□□□□□ -1.91
CTR9Q6PD62 RPL21P32-201ENST00000419877 477 ntBASIC3.09□□□□□ -1.91
CTR9Q6PD62 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC3.09□□□□□ -1.91
CTR9Q6PD62 AC011816.1-201ENST00000441346 546 ntBASIC3.09□□□□□ -1.91
CTR9Q6PD62 RPS15AP36-201ENST00000492022 382 ntBASIC3.09□□□□□ -1.91
CTR9Q6PD62 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC3.09□□□□□ -1.91
CTR9Q6PD62 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC3.09□□□□□ -1.91
CTR9Q6PD62 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC3.09□□□□□ -1.91
CTR9Q6PD62 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC3.09□□□□□ -1.91
CTR9Q6PD62 AC100870.1-201ENST00000522035 505 ntBASIC3.09□□□□□ -1.91
CTR9Q6PD62 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC3.09□□□□□ -1.91
CTR9Q6PD62 AC243972.3-201ENST00000539655 198 ntBASIC3.09□□□□□ -1.91
CTR9Q6PD62 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC3.09□□□□□ -1.91
CTR9Q6PD62 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC3.09□□□□□ -1.91
CTR9Q6PD62 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC3.09□□□□□ -1.91
CTR9Q6PD62 AC234778.2-201ENST00000566241 354 ntBASIC3.09□□□□□ -1.91
CTR9Q6PD62 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC3.09□□□□□ -1.91
CTR9Q6PD62 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC3.09□□□□□ -1.91
CTR9Q6PD62 U73023.1-201ENST00000603134 700 ntBASIC3.09□□□□□ -1.91
CTR9Q6PD62 AC007038.2-201ENST00000608095 740 ntBASIC3.09□□□□□ -1.91
CTR9Q6PD62 AC239868.4-201ENST00000608318 671 ntBASIC3.09□□□□□ -1.91
CTR9Q6PD62 AL161734.1-201ENST00000609720 557 ntBASIC3.09□□□□□ -1.91
CTR9Q6PD62 AC073114.1-201ENST00000612027 490 ntBASIC3.09□□□□□ -1.91
CTR9Q6PD62 ANKRD18EP-201ENST00000405487 2632 ntBASIC3.09□□□□□ -1.91
CTR9Q6PD62 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.92
CTR9Q6PD62 ELL2P3-201ENST00000457883 1602 ntBASIC3.08□□□□□ -1.92
CTR9Q6PD62 DEFA7P-201ENST00000382676 285 ntBASIC3.08□□□□□ -1.92
CTR9Q6PD62 RNU1-39P-201ENST00000383897 165 ntBASIC3.08□□□□□ -1.92
CTR9Q6PD62 MTND1P28-201ENST00000435623 950 ntBASIC3.08□□□□□ -1.92
CTR9Q6PD62 MRPL50P4-201ENST00000446432 475 ntBASIC3.08□□□□□ -1.92
CTR9Q6PD62 AL592447.1-201ENST00000447592 540 ntBASIC3.08□□□□□ -1.92
CTR9Q6PD62 RPL23AP41-201ENST00000484754 458 ntBASIC3.08□□□□□ -1.92
CTR9Q6PD62 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC3.08□□□□□ -1.92
CTR9Q6PD62 RPL37P25-201ENST00000507308 276 ntBASIC3.08□□□□□ -1.92
CTR9Q6PD62 AC114781.4-201ENST00000513707 639 ntBASIC3.08□□□□□ -1.92
CTR9Q6PD62 AC022616.6-201ENST00000520479 119 ntBASIC3.08□□□□□ -1.92
CTR9Q6PD62 AP003122.4-201ENST00000530980 758 ntBASIC3.08□□□□□ -1.92
CTR9Q6PD62 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC3.08□□□□□ -1.92
CTR9Q6PD62 ACTR3BP3-201ENST00000565577 979 ntBASIC3.08□□□□□ -1.92
CTR9Q6PD62 AC005951.2-201ENST00000576282 495 ntBASIC3.08□□□□□ -1.92
CTR9Q6PD62 MIR4446-201ENST00000578505 67 ntBASIC3.08□□□□□ -1.92
CTR9Q6PD62 MIR5194-201ENST00000582634 120 ntBASIC3.08□□□□□ -1.92
CTR9Q6PD62 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC3.08□□□□□ -1.92
CTR9Q6PD62 AC004908.2-201ENST00000609090 574 ntBASIC3.08□□□□□ -1.92
CTR9Q6PD62 AC004908.3-201ENST00000610248 625 ntBASIC3.08□□□□□ -1.92
CTR9Q6PD62 AC104237.2-201ENST00000612456 443 ntBASIC3.08□□□□□ -1.92
CTR9Q6PD62 Z69908.1-201ENST00000622603 247 ntBASIC3.08□□□□□ -1.92
CTR9Q6PD62 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC3.08□□□□□ -1.92
CTR9Q6PD62 AC025048.6-202ENST00000627667 438 ntBASIC3.08□□□□□ -1.92
CTR9Q6PD62 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
CTR9Q6PD62 AC099654.13-201ENST00000639774 207 ntBASIC3.08□□□□□ -1.92
CTR9Q6PD62 AC005832.2-201ENST00000538921 1430 ntBASIC3.08□□□□□ -1.92
CTR9Q6PD62 DDX10P1-201ENST00000448545 1933 ntBASIC3.07□□□□□ -1.92
CTR9Q6PD62 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
CTR9Q6PD62 MIR6073-201ENST00000352083 89 ntBASIC3.07□□□□□ -1.92
CTR9Q6PD62 SNORD62.1-201ENST00000362541 86 ntBASIC3.07□□□□□ -1.92
CTR9Q6PD62 MIR493-201ENST00000385254 89 ntBASIC3.07□□□□□ -1.92
CTR9Q6PD62 AL109755.1-201ENST00000401791 649 ntBASIC3.07□□□□□ -1.92
CTR9Q6PD62 UBE2FP1-201ENST00000416536 447 ntBASIC3.07□□□□□ -1.92
CTR9Q6PD62 SLC44A3-AS1-205ENST00000424505 612 ntBASIC3.07□□□□□ -1.92
CTR9Q6PD62 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC3.07□□□□□ -1.92
CTR9Q6PD62 AC098826.1-201ENST00000433943 471 ntBASIC3.07□□□□□ -1.92
CTR9Q6PD62 TIMM9P1-201ENST00000436122 256 ntBASIC3.07□□□□□ -1.92
CTR9Q6PD62 RPL22P17-201ENST00000438729 315 ntBASIC3.07□□□□□ -1.92
CTR9Q6PD62 USP9YP12-201ENST00000450481 570 ntBASIC3.07□□□□□ -1.92
CTR9Q6PD62 CACYBPP2-201ENST00000453625 678 ntBASIC3.07□□□□□ -1.92
CTR9Q6PD62 RNU7-59P-201ENST00000459101 61 ntBASIC3.07□□□□□ -1.92
CTR9Q6PD62 MAL2-206ENST00000522187 547 ntTSL 4 BASIC3.07□□□□□ -1.92
CTR9Q6PD62 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC3.07□□□□□ -1.92
CTR9Q6PD62 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC3.07□□□□□ -1.92
CTR9Q6PD62 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC3.07□□□□□ -1.92
CTR9Q6PD62 MIR3921-201ENST00000577308 85 ntBASIC3.07□□□□□ -1.92
CTR9Q6PD62 MIR4513-201ENST00000581077 86 ntBASIC3.07□□□□□ -1.92
CTR9Q6PD62 MIR3118-1-201ENST00000581787 76 ntBASIC3.07□□□□□ -1.92
CTR9Q6PD62 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC3.07□□□□□ -1.92
CTR9Q6PD62 AC060766.3-201ENST00000591442 263 ntBASIC3.07□□□□□ -1.92
CTR9Q6PD62 AP001981.2-201ENST00000603241 418 ntBASIC3.07□□□□□ -1.92
CTR9Q6PD62 AC112191.3-201ENST00000604371 277 ntBASIC3.07□□□□□ -1.92
CTR9Q6PD62 AP002826.1-201ENST00000608835 315 ntBASIC3.07□□□□□ -1.92
CTR9Q6PD62 AC245517.5-201ENST00000611529 162 ntBASIC3.07□□□□□ -1.92
CTR9Q6PD62 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC3.07□□□□□ -1.92
CTR9Q6PD62 AC009878.1-201ENST00000621819 340 ntBASIC3.07□□□□□ -1.92
CTR9Q6PD62 AL603839.4-201ENST00000624658 1005 ntBASIC3.07□□□□□ -1.92
CTR9Q6PD62 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC3.07□□□□□ -1.92
CTR9Q6PD62 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC3.06□□□□□ -1.92
CTR9Q6PD62 RNU5A-1-201ENST00000362698 116 ntBASIC3.06□□□□□ -1.92
CTR9Q6PD62 RNU6-223P-201ENST00000362830 107 ntBASIC3.06□□□□□ -1.92
CTR9Q6PD62 RNU5A-8P-201ENST00000364102 114 ntBASIC3.06□□□□□ -1.92
CTR9Q6PD62 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
CTR9Q6PD62 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC3.06□□□□□ -1.92
CTR9Q6PD62 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC3.06□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 152.3 ms