Protein–RNA interactions for Protein: Q08945

SSRP1, FACT complex subunit SSRP1, humanhuman

Known RBP Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1Q08945 RPL7P43-201ENST00000478876 753 ntBASIC4.46□□□□□ -1.7
SSRP1Q08945 SUMO2P6-201ENST00000505273 288 ntBASIC4.46□□□□□ -1.7
SSRP1Q08945 AC009901.1-201ENST00000506703 541 ntBASIC4.46□□□□□ -1.7
SSRP1Q08945 HPRT1P3-201ENST00000539521 576 ntBASIC4.46□□□□□ -1.7
SSRP1Q08945 APAF1-207ENST00000547743 651 ntTSL 3 BASIC4.46□□□□□ -1.7
SSRP1Q08945 NACA-211ENST00000548563 827 ntTSL 5 BASIC4.46□□□□□ -1.7
SSRP1Q08945 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC4.46□□□□□ -1.7
SSRP1Q08945 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
SSRP1Q08945 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC4.46□□□□□ -1.7
SSRP1Q08945 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC4.46□□□□□ -1.7
SSRP1Q08945 AC012119.1-201ENST00000603184 222 ntBASIC4.46□□□□□ -1.7
SSRP1Q08945 AL050343.2-201ENST00000607338 280 ntBASIC4.46□□□□□ -1.7
SSRP1Q08945 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC4.46□□□□□ -1.7
SSRP1Q08945 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC4.46□□□□□ -1.7
SSRP1Q08945 MTND1P37-201ENST00000636562 264 ntBASIC4.46□□□□□ -1.7
SSRP1Q08945 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC4.46□□□□□ -1.7
SSRP1Q08945 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC4.46□□□□□ -1.7
SSRP1Q08945 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC4.46□□□□□ -1.7
SSRP1Q08945 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC4.46□□□□□ -1.7
SSRP1Q08945 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
SSRP1Q08945 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
SSRP1Q08945 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
SSRP1Q08945 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.45□□□□□ -1.7
SSRP1Q08945 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
SSRP1Q08945 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
SSRP1Q08945 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC4.45□□□□□ -1.7
SSRP1Q08945 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
SSRP1Q08945 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.45□□□□□ -1.7
SSRP1Q08945 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
SSRP1Q08945 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
SSRP1Q08945 Y_RNA.387-201ENST00000383918 102 ntBASIC4.45□□□□□ -1.7
SSRP1Q08945 FAT1P1-201ENST00000406588 507 ntBASIC4.45□□□□□ -1.7
SSRP1Q08945 RNU2-33P-201ENST00000410344 192 ntBASIC4.45□□□□□ -1.7
SSRP1Q08945 RPL21P90-201ENST00000415692 466 ntBASIC4.45□□□□□ -1.7
SSRP1Q08945 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC4.45□□□□□ -1.7
SSRP1Q08945 AC005019.1-201ENST00000436455 431 ntBASIC4.45□□□□□ -1.7
SSRP1Q08945 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC4.45□□□□□ -1.7
SSRP1Q08945 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC4.45□□□□□ -1.7
SSRP1Q08945 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
SSRP1Q08945 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC4.45□□□□□ -1.7
SSRP1Q08945 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC4.45□□□□□ -1.7
SSRP1Q08945 Y_RNA.682-201ENST00000516457 100 ntBASIC4.45□□□□□ -1.7
SSRP1Q08945 RNU6-1069P-201ENST00000516612 133 ntBASIC4.45□□□□□ -1.7
SSRP1Q08945 RNU6-1088P-201ENST00000516850 104 ntBASIC4.45□□□□□ -1.7
SSRP1Q08945 RNU6-1315P-201ENST00000517187 99 ntBASIC4.45□□□□□ -1.7
SSRP1Q08945 RNA5SP291-201ENST00000517222 105 ntBASIC4.45□□□□□ -1.7
SSRP1Q08945 AC022695.1-201ENST00000522089 237 ntBASIC4.45□□□□□ -1.7
SSRP1Q08945 CYCSP27-201ENST00000527643 293 ntBASIC4.45□□□□□ -1.7
SSRP1Q08945 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC4.45□□□□□ -1.7
SSRP1Q08945 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC4.45□□□□□ -1.7
SSRP1Q08945 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC4.45□□□□□ -1.7
SSRP1Q08945 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC4.45□□□□□ -1.7
SSRP1Q08945 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC4.45□□□□□ -1.7
SSRP1Q08945 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC4.45□□□□□ -1.7
SSRP1Q08945 MIR1254-2-201ENST00000579553 63 ntBASIC4.45□□□□□ -1.7
SSRP1Q08945 MIR3690-201ENST00000580266 75 ntBASIC4.45□□□□□ -1.7
SSRP1Q08945 MIR4286-201ENST00000580651 93 ntBASIC4.45□□□□□ -1.7
SSRP1Q08945 MIR3672-201ENST00000584290 82 ntBASIC4.45□□□□□ -1.7
SSRP1Q08945 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC4.45□□□□□ -1.7
SSRP1Q08945 AC006023.2-201ENST00000609916 167 ntBASIC4.45□□□□□ -1.7
SSRP1Q08945 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC4.45□□□□□ -1.7
SSRP1Q08945 VPS8-228ENST00000628962 207 ntTSL 5 BASIC4.45□□□□□ -1.7
SSRP1Q08945 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC4.45□□□□□ -1.7
SSRP1Q08945 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
SSRP1Q08945 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
SSRP1Q08945 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
SSRP1Q08945 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC4.45□□□□□ -1.7
SSRP1Q08945 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
SSRP1Q08945 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC4.45□□□□□ -1.7
SSRP1Q08945 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
SSRP1Q08945 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
SSRP1Q08945 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
SSRP1Q08945 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
SSRP1Q08945 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC4.44□□□□□ -1.7
SSRP1Q08945 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
SSRP1Q08945 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC4.44□□□□□ -1.7
SSRP1Q08945 RNU6-50P-201ENST00000362356 103 ntBASIC4.44□□□□□ -1.7
SSRP1Q08945 MIR578-201ENST00000384828 96 ntBASIC4.44□□□□□ -1.7
SSRP1Q08945 MIR450B-201ENST00000401182 78 ntBASIC4.44□□□□□ -1.7
SSRP1Q08945 AL445189.1-201ENST00000405722 338 ntBASIC4.44□□□□□ -1.7
SSRP1Q08945 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC4.44□□□□□ -1.7
SSRP1Q08945 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC4.44□□□□□ -1.7
SSRP1Q08945 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC4.44□□□□□ -1.7
SSRP1Q08945 AC007919.1-201ENST00000429380 217 ntBASIC4.44□□□□□ -1.7
SSRP1Q08945 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC4.44□□□□□ -1.7
SSRP1Q08945 RPL23AP69-201ENST00000431134 458 ntBASIC4.44□□□□□ -1.7
SSRP1Q08945 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC4.44□□□□□ -1.7
SSRP1Q08945 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC4.44□□□□□ -1.7
SSRP1Q08945 FGF7P3-201ENST00000454645 303 ntBASIC4.44□□□□□ -1.7
SSRP1Q08945 MTND4P17-201ENST00000470444 350 ntBASIC4.44□□□□□ -1.7
SSRP1Q08945 AC084198.1-201ENST00000477747 402 ntBASIC4.44□□□□□ -1.7
SSRP1Q08945 TRBV12-2-201ENST00000489763 344 ntBASIC4.44□□□□□ -1.7
SSRP1Q08945 AC079140.5-201ENST00000507882 310 ntBASIC4.44□□□□□ -1.7
SSRP1Q08945 AC026402.1-201ENST00000513642 170 ntBASIC4.44□□□□□ -1.7
SSRP1Q08945 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC4.44□□□□□ -1.7
SSRP1Q08945 RNA5SP468-201ENST00000516782 93 ntBASIC4.44□□□□□ -1.7
SSRP1Q08945 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC4.44□□□□□ -1.7
SSRP1Q08945 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC4.44□□□□□ -1.7
SSRP1Q08945 MIR3160-1-201ENST00000577972 85 ntBASIC4.44□□□□□ -1.7
SSRP1Q08945 AC053481.4-201ENST00000583164 216 ntBASIC4.44□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 114.3 ms